Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4FUT
DownloadVisualize
BU of 4fut by Molmil
Crystal structure of ATP bound MatB from Rhodopseudomonas palustris
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Rank, K.C, Crosby, H.A, Escalante-Semerena, J.C, Rayment, I.
Deposit date:2012-06-28
Release date:2012-07-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-Guided Expansion of the Substrate Range of Methylmalonyl Coenzyme A Synthetase (MatB) of Rhodopseudomonas palustris.
Appl.Environ.Microbiol., 78, 2012
4GXR
DownloadVisualize
BU of 4gxr by Molmil
Structure of ATP bound RpMatB-BxBclM chimera B3
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CARBONATE ION, GLYCEROL, ...
Authors:Rank, K.C, Crosby, H.A, Escalante-Semerena, J.C, Rayment, I.
Deposit date:2012-09-04
Release date:2012-10-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insights into the Substrate Specificity of the Rhodopseudomonas palustris Protein Acetyltransferase RpPat: IDENTIFICATION OF A LOOP CRITICAL FOR RECOGNITION BY RpPat.
J.Biol.Chem., 287, 2012
4GXQ
DownloadVisualize
BU of 4gxq by Molmil
Crystal Structure of ATP bound RpMatB-BxBclM chimera B1
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CARBONATE ION, MAGNESIUM ION, ...
Authors:Rank, K.C, Crosby, H.A, Escalante-Semerena, J.C, Rayment, I.
Deposit date:2012-09-04
Release date:2012-10-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insights into the Substrate Specificity of the Rhodopseudomonas palustris Protein Acetyltransferase RpPat: IDENTIFICATION OF A LOOP CRITICAL FOR RECOGNITION BY RpPat.
J.Biol.Chem., 287, 2012
4HDS
DownloadVisualize
BU of 4hds by Molmil
Crystal Structure of ArsAB in Complex with Phenol.
Descriptor: 1,2-ETHANEDIOL, ArsA, ArsB, ...
Authors:Newmister, S.A, Chan, C.H, Escalante-Semerena, J.C, Rayment, I.
Deposit date:2012-10-02
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Insights into the Function of the Nicotinate Mononucleotide:phenol/p-cresol Phosphoribosyltransferase (ArsAB) Enzyme from Sporomusa ovata.
Biochemistry, 51, 2012
4HDM
DownloadVisualize
BU of 4hdm by Molmil
Crystal Structure of ArsAB in Complex with p-cresol
Descriptor: 1,2-ETHANEDIOL, ArsA, ArsB, ...
Authors:Newmister, S.A, Chan, C.H, Escalante-Semerena, J.C, Rayment, I.
Deposit date:2012-10-02
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Insights into the Function of the Nicotinate Mononucleotide:phenol/p-cresol Phosphoribosyltransferase (ArsAB) Enzyme from Sporomusa ovata.
Biochemistry, 51, 2012
4HDK
DownloadVisualize
BU of 4hdk by Molmil
Crystal Structure of ArsAB in Complex with Phloroglucinol
Descriptor: 1,2-ETHANEDIOL, ArsA, ArsB, ...
Authors:Newmister, S.A, Chan, C.H, Escalante-Semerena, J.C, Rayment, I.
Deposit date:2012-10-02
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Insights into the Function of the Nicotinate Mononucleotide:phenol/p-cresol Phosphoribosyltransferase (ArsAB) Enzyme from Sporomusa ovata.
Biochemistry, 51, 2012
4HDN
DownloadVisualize
BU of 4hdn by Molmil
Crystal Structure of ArsAB in the Substrate-Free State.
Descriptor: ArsA, ArsB
Authors:Newmister, S.A, Chan, C.H, Escalante-Semerena, J.C, Rayment, I.
Deposit date:2012-10-02
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structural Insights into the Function of the Nicotinate Mononucleotide:phenol/p-cresol Phosphoribosyltransferase (ArsAB) Enzyme from Sporomusa ovata.
Biochemistry, 51, 2012
4HDR
DownloadVisualize
BU of 4hdr by Molmil
Crystal Structure of ArsAB in Complex with 5,6-dimethylbenzimidazole
Descriptor: 1,2-ETHANEDIOL, 5,6-DIMETHYLBENZIMIDAZOLE, ArsA, ...
Authors:Newmister, S.A, Chan, C.H, Escalante-Semerena, J.C, Rayment, I.
Deposit date:2012-10-02
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Insights into the Function of the Nicotinate Mononucleotide:phenol/p-cresol Phosphoribosyltransferase (ArsAB) Enzyme from Sporomusa ovata.
Biochemistry, 51, 2012
4HUT
DownloadVisualize
BU of 4hut by Molmil
Structure of ATP:co(I)rrinoid adenosyltransferase (CobA) from Salmonella enterica in complex with four and five-coordinate cob(II)alamin and ATP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, COBALAMIN, ...
Authors:Moore, T.C, Newmister, S.A, Rayment, I, Escalante-Semerena, J.C.
Deposit date:2012-11-04
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Insights into the Mechanism of Four-Coordinate Cob(II)alamin Formation in the Active Site of the Salmonella enterica ATP:Co(I)rrinoid Adenosyltransferase Enzyme: Critical Role of Residues Phe91 and Trp93.
Biochemistry, 51, 2012
1G5T
DownloadVisualize
BU of 1g5t by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF ATP:CORRINOID ADENOSYLTRANSFERASE FROM SALMONELLA TYPHIMURIUM. APO-ATP FORM
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, COB(I)ALAMIN ADENOSYLTRANSFERASE, MAGNESIUM ION
Authors:Rayment, I, Escalante-Semerena, J.C, Bauer, C.B.
Deposit date:2000-11-02
Release date:2000-11-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-dimensional structure of ATP:corrinoid adenosyltransferase from Salmonella typhimurium in its free state, complexed with MgATP, or complexed with hydroxycobalamin and MgATP.
Biochemistry, 40, 2001
1G64
DownloadVisualize
BU of 1g64 by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF ATP:CORRINOID ADENOSYLTRANSFERASE FROM SALMONELLA TYPHIMURIUM. COBALAMIN/ATP TERNARY COMPLEX
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, COB(I)ALAMIN ADENOSYLTRANSFERASE, COBALAMIN, ...
Authors:Rayment, I, Escalante-Semerena, J.C, Bauer, C.B.
Deposit date:2000-11-03
Release date:2000-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three-dimensional structure of ATP:corrinoid adenosyltransferase from Salmonella typhimurium in its free state, complexed with MgATP, or complexed with hydroxycobalamin and MgATP.
Biochemistry, 40, 2001
1G5R
DownloadVisualize
BU of 1g5r by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF ATP:CORRINOID ADENOSYLTRANSFERASE FROM SALMONELLA TYPHIMURIUM. APO FORM
Descriptor: CHLORIDE ION, COB(I)ALAMIN ADENOSYLTRANSFERASE
Authors:Rayment, I, Escalante-Semerena, J.C, Bauer, C.B.
Deposit date:2000-11-02
Release date:2000-11-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three-dimensional structure of ATP:corrinoid adenosyltransferase from Salmonella typhimurium in its free state, complexed with MgATP, or complexed with hydroxycobalamin and MgATP.
Biochemistry, 40, 2001
1LKC
DownloadVisualize
BU of 1lkc by Molmil
Crystal Structure of L-Threonine-O-3-Phosphate Decarboxylase from Salmonella enterica
Descriptor: 1,2-ETHANEDIOL, L-threonine-O-3-phosphate decarboxylase, PHOSPHATE ION, ...
Authors:Cheong, C.G, Bauer, C.B, Brushaber, K.R, Escalante-Semerena, J.C, Rayment, I.
Deposit date:2002-04-24
Release date:2002-05-01
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-dimensional structure of the L-threonine-O-3-phosphate decarboxylase (CobD) enzyme from Salmonella enterica.
Biochemistry, 41, 2002
1PG3
DownloadVisualize
BU of 1pg3 by Molmil
Acetyl CoA Synthetase, Acetylated on Lys609
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-MONOPHOSPHATE-PROPYL ESTER, COENZYME A, ...
Authors:Gulick, A.M, Starai, V.J, Horswill, A.R, Homick, K.M, Escalante-Semerena, J.C.
Deposit date:2003-05-27
Release date:2003-06-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The 1.75 A Crystal Structure of Acetyl-CoA Synthetase Bound to Adenosine-5'-propylphosphate and Coenzyme A
Biochemistry, 42, 2003
1PG4
DownloadVisualize
BU of 1pg4 by Molmil
Acetyl CoA Synthetase, Salmonella enterica
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-MONOPHOSPHATE-PROPYL ESTER, CHLORIDE ION, ...
Authors:Gulick, A.M, Starai, V.J, Horswill, A.R, Homick, K.M, Escalante-Semerena, J.C.
Deposit date:2003-05-27
Release date:2003-06-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The 1.75 A Crystal Structure of Acetyl-CoA Synthetase Bound to Adenosine-5'-propylphosphate and Coenzyme A
Biochemistry, 42, 2003
4WD1
DownloadVisualize
BU of 4wd1 by Molmil
Acetoacetyl-CoA Synthetase from Streptomyces lividans
Descriptor: 1,2-ETHANEDIOL, Acetoacetate-CoA ligase, CALCIUM ION
Authors:Gulick, A.M, Mitchell, C.A.
Deposit date:2014-09-05
Release date:2015-01-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:The structure of S. lividans acetoacetyl-CoA synthetase shows a novel interaction between the C-terminal extension and the N-terminal domain.
Proteins, 83, 2015
5K87
DownloadVisualize
BU of 5k87 by Molmil
crystal structure of malonate bound to methylaconitate isomerase PrpF from Shewanella oneidensis
Descriptor: 2-methyl-aconitate isomerase, MALONATE ION
Authors:Rayment, I, Wetterhorn, K.
Deposit date:2016-05-27
Release date:2017-05-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.219 Å)
Cite:The PrpF protein of Shewanella oneidensis MR-1 catalyzes the isomerization of 2-methyl-cis-aconitate during the catabolism of propionate via the AcnD-dependent 2-methylcitric acid cycle.
PLoS ONE, 12, 2017
6PT8
DownloadVisualize
BU of 6pt8 by Molmil
Crystal Structure of CobT from Methanocaldococcus jannaschii in complex with Adenine Alpha-Ribotide and Nicotinic Acid
Descriptor: ALPHA-ADENOSINE MONOPHOSPHATE, NICOTINIC ACID, PHOSPHATE ION, ...
Authors:Schwarzwalder, A.H, Jeter, V.L, Vecellio, A.A, Erpenbach, E, Escalante, J.C, Rayment, I.
Deposit date:2019-07-15
Release date:2020-07-22
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural studies of the phosphoribosyltransferase involved in cobamide biosynthesis in methanogenic archaea and cyanobacteria.
Sci Rep, 12, 2022
1C9K
DownloadVisualize
BU of 1c9k by Molmil
THE THREE DIMENSIONAL STRUCTURE OF ADENOSYLCOBINAMIDE KINASE/ ADENOSYLCOBINAMIDE PHOSPHATE GUALYLYLTRANSFERASE (COBU) COMPLEXED WITH GMP: EVIDENCE FOR A SUBSTRATE INDUCED TRANSFERASE ACTIVE SITE
Descriptor: ADENOSYLCOBINAMIDE KINASE, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Thompson, T.B, Thomas, M.G, Esclante-Semerena, J.C, Rayment, I.
Deposit date:1999-08-02
Release date:1999-08-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional structure of adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase (CobU) complexed with GMP: evidence for a substrate-induced transferase active site.
Biochemistry, 38, 1999
2PW0
DownloadVisualize
BU of 2pw0 by Molmil
crystal structure of trans-aconitate bound to methylaconitate isomerase PrpF from Shewanella oneidensis
Descriptor: 1,2-ETHANEDIOL, PrpF methylaconitate isomerase, TRICARBALLYLIC ACID
Authors:Garvey, G.S, Rayment, I.R.
Deposit date:2007-05-10
Release date:2007-08-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:The three-dimensional crystal structure of the PrpF protein of Shewanella oneidensis complexed with trans-aconitate: insights into its biological function.
Protein Sci., 16, 2007
3PDH
DownloadVisualize
BU of 3pdh by Molmil
Structure of Sir2Tm bound to a propionylated peptide
Descriptor: Cellular tumor antigen p53 18-residue peptide, NAD-dependent deacetylase, ZINC ION
Authors:Wolberger, C, Bheda, P.
Deposit date:2010-10-22
Release date:2011-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Sir2Tm bound to a propionylated peptide.
Protein Sci., 20, 2011
2PVZ
DownloadVisualize
BU of 2pvz by Molmil
Crystal structure of methylaconitate isomerase PrpF from Shewanella oneidensis
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, PrpF methylaconitate isomerase
Authors:Garvey, G.S, Rayment, I.R.
Deposit date:2007-05-10
Release date:2007-08-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The three-dimensional crystal structure of the PrpF protein of Shewanella oneidensis complexed with trans-aconitate: insights into its biological function.
Protein Sci., 16, 2007
1JHQ
DownloadVisualize
BU of 1jhq by Molmil
Three-dimensional Structure of CobT in Complex with Reaction Products of 5-methoxybenzimidazole and NaMN
Descriptor: N1-(5'-PHOSPHO-ALPHA-RIBOSYL)-5-METHOXYBENZIMIDAZOLE, NICOTINIC ACID, Nicotinate Mononucleotide:5,6-Dimethylbenzimidazole Phosphoribosyltransferase
Authors:Cheong, C.G, Escalante-Semerena, J, Rayment, I.
Deposit date:2001-06-28
Release date:2001-10-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural investigation of the biosynthesis of alternative lower ligands for cobamides by nicotinate mononucleotide: 5,6-dimethylbenzimidazole phosphoribosyltransferase from Salmonella enterica.
J.Biol.Chem., 276, 2001
1JHY
DownloadVisualize
BU of 1jhy by Molmil
Three-dimensional Structure of CobT in Complex with Phenol and Nicotinate
Descriptor: NICOTINIC ACID, Nicotinate Mononucleotide:5,6-Dimethylbenzimidazole Phosphoribosyltransferase, PHENOL, ...
Authors:Cheong, C.G, Escalante-Semerena, J, Rayment, I.
Deposit date:2001-06-28
Release date:2001-10-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural investigation of the biosynthesis of alternative lower ligands for cobamides by nicotinate mononucleotide: 5,6-dimethylbenzimidazole phosphoribosyltransferase from Salmonella enterica.
J.Biol.Chem., 276, 2001
1JHO
DownloadVisualize
BU of 1jho by Molmil
Three-dimensional Structure of CobT in Complex with the Reaction Products of 5-methylbenzimidazole and NaMN
Descriptor: N1-(5'-PHOSPHO-ALPHA-RIBOSYL)-5-METHYLBENZIMIDAZOLE, NICOTINIC ACID, Nicotinate Mononucleotide:5,6-Dimethylbenzimidazole Phosphoribosyltransferase
Authors:Cheong, C.G, Escalante-Semerena, J, Rayment, I.
Deposit date:2001-06-28
Release date:2001-10-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural investigation of the biosynthesis of alternative lower ligands for cobamides by nicotinate mononucleotide: 5,6-dimethylbenzimidazole phosphoribosyltransferase from Salmonella enterica.
J.Biol.Chem., 276, 2001

220113

건을2024-05-22부터공개중

PDB statisticsPDBj update infoContact PDBjnumon