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5UL2
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BU of 5ul2 by Molmil
Structure of Apo, SeMet-labeled Cobalamin-dependent S-adenosylmethionine radical enzyme OxsB
分子名称: 1,2-ETHANEDIOL, OxsB protein
著者Bridwell-Rabb, J, Drennan, C.L.
登録日2017-01-24
公開日2017-04-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.552 Å)
主引用文献A B12-dependent radical SAM enzyme involved in oxetanocin A biosynthesis.
Nature, 544, 2017
5UL4
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BU of 5ul4 by Molmil
Structure of Cobalamin-dependent S-adenosylmethionine radical enzyme OxsB with aqua-cobalamin and S-adenosylmethionine bound
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COBALAMIN, ...
著者Bridwell-Rabb, J, Drennan, C.L.
登録日2017-01-24
公開日2017-04-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A B12-dependent radical SAM enzyme involved in oxetanocin A biosynthesis.
Nature, 544, 2017
5W1F
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BU of 5w1f by Molmil
Crystal structure of Ni(II)- and Ca(II)-bound human calprotectin
分子名称: CALCIUM ION, NICKEL (II) ION, Protein S100-A8, ...
著者Nakashige, T.G, Drennan, C.L, Nolan, E.M.
登録日2017-06-03
公開日2017-06-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Nickel Sequestration by the Host-Defense Protein Human Calprotectin.
J. Am. Chem. Soc., 139, 2017
4IXN
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BU of 4ixn by Molmil
Crystal Structure of Zn(II)-bound E37A,C66A,C67A triple mutant YjiA GTPase
分子名称: SULFATE ION, Uncharacterized GTP-binding protein YjiA, ZINC ION
著者Jost, M, Drennan, C.L.
登録日2013-01-26
公開日2013-02-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Metal binding properties of Escherichia coli YjiA, a member of the metal homeostasis-associated COG0523 family of GTPases.
Biochemistry, 52, 2013
4IXM
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BU of 4ixm by Molmil
Crystal structure of Zn(II)-bound YjiA GTPase from E. coli
分子名称: SULFATE ION, Uncharacterized GTP-binding protein YjiA, ZINC ION
著者Jost, M, Ryan, K.S, Turo, K.E, Drennan, C.L.
登録日2013-01-26
公開日2013-02-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Metal binding properties of Escherichia coli YjiA, a member of the metal homeostasis-associated COG0523 family of GTPases.
Biochemistry, 52, 2013
4K38
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BU of 4k38 by Molmil
Native anSMEcpe with bound AdoMet and Kp18Cys peptide
分子名称: Anaerobic sulfatase-maturating enzyme, CHLORIDE ION, GLYCEROL, ...
著者Goldman, P.J, Drennan, C.L.
登録日2013-04-10
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.831 Å)
主引用文献X-ray structure of an AdoMet radical activase reveals an anaerobic solution for formylglycine posttranslational modification.
Proc.Natl.Acad.Sci.USA, 110, 2013
4K37
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BU of 4k37 by Molmil
Native anSMEcpe with bound AdoMet
分子名称: Anaerobic sulfatase-maturating enzyme, CHLORIDE ION, GLYCEROL, ...
著者Goldman, P.J, Drennan, C.L.
登録日2013-04-10
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献X-ray structure of an AdoMet radical activase reveals an anaerobic solution for formylglycine posttranslational modification.
Proc.Natl.Acad.Sci.USA, 110, 2013
4K36
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BU of 4k36 by Molmil
His6 tagged anSMEcpe with bound AdoMet
分子名称: Anaerobic sulfatase-maturating enzyme, CHLORIDE ION, IRON/SULFUR CLUSTER, ...
著者Goldman, P.J, Drennan, C.L.
登録日2013-04-10
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.619 Å)
主引用文献X-ray structure of an AdoMet radical activase reveals an anaerobic solution for formylglycine posttranslational modification.
Proc.Natl.Acad.Sci.USA, 110, 2013
4K39
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BU of 4k39 by Molmil
Native anSMEcpe with bound AdoMet and Cp18Cys peptide
分子名称: Anaerobic sulfatase-maturating enzyme, CHLORIDE ION, Cp18Cys peptide, ...
著者Goldman, P.J, Drennan, C.L.
登録日2013-04-10
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.783 Å)
主引用文献X-ray structure of an AdoMet radical activase reveals an anaerobic solution for formylglycine posttranslational modification.
Proc.Natl.Acad.Sci.USA, 110, 2013
4M7S
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BU of 4m7s by Molmil
Crystal structure of SeMet BtrN in an OPEN conformation
分子名称: BtrN, GLYCEROL, IMIDAZOLE, ...
著者Goldman, P.J, Drennan, C.L.
登録日2013-08-12
公開日2013-10-02
最終更新日2014-02-05
実験手法X-RAY DIFFRACTION (2.022 Å)
主引用文献X-ray analysis of butirosin biosynthetic enzyme BtrN redefines structural motifs for AdoMet radical chemistry.
Proc.Natl.Acad.Sci.USA, 110, 2013
4NJI
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BU of 4nji by Molmil
Crystal Structure of QueE from Burkholderia multivorans in complex with AdoMet, 6-carboxy-5,6,7,8-tetrahydropterin, and Mg2+
分子名称: (6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridine-6-carboxylic acid, 7-carboxy-7-deazaguanine synthase, IRON/SULFUR CLUSTER, ...
著者Dowling, D.P, Bruender, N.A, Young, A.P, McCarty, R.M, Bandarian, V, Drennan, C.L.
登録日2013-11-10
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.197 Å)
主引用文献Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism.
Nat.Chem.Biol., 10, 2014
4NJH
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BU of 4njh by Molmil
Crystal Structure of QueE from Burkholderia multivorans in complex with AdoMet and 6-carboxy-5,6,7,8-tetrahydropterin
分子名称: (6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridine-6-carboxylic acid, 7-carboxy-7-deazaguanine synthase, IRON/SULFUR CLUSTER, ...
著者Dowling, D.P, Bruender, N.A, Young, A.P, McCarty, R.M, Bandarian, V, Drennan, C.L.
登録日2013-11-10
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism.
Nat.Chem.Biol., 10, 2014
4NJJ
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BU of 4njj by Molmil
Crystal Structure of QueE from Burkholderia multivorans in complex with AdoMet, 6-carboxy-5,6,7,8-tetrahydropterin, and Manganese(II)
分子名称: (6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridine-6-carboxylic acid, 7-carboxy-7-deazaguanine synthase, IRON/SULFUR CLUSTER, ...
著者Dowling, D.P, Bruender, N.A, Young, A.P, McCarty, R.M, Bandarian, V, Drennan, C.L.
登録日2013-11-10
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism.
Nat.Chem.Biol., 10, 2014
4NJG
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BU of 4njg by Molmil
Crystal Structure of QueE from Burkholderia multivorans in complex with AdoMet and 6-carboxypterin
分子名称: 6-CARBOXYPTERIN, 7-carboxy-7-deazaguanine synthase, IRON/SULFUR CLUSTER, ...
著者Dowling, D.P, Bruender, N.A, Young, A.P, McCarty, R.M, Bandarian, V, Drennan, C.L.
登録日2013-11-10
公開日2013-12-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism.
Nat.Chem.Biol., 10, 2014
4NJK
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BU of 4njk by Molmil
Crystal Structure of QueE from Burkholderia multivorans in complex with AdoMet, 7-carboxy-7-deazaguanine, and Mg2+
分子名称: 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carboxylic acid, 7-carboxy-7-deazaguanine synthase, IRON/SULFUR CLUSTER, ...
著者Dowling, D.P, Bruender, N.A, Young, A.P, McCarty, R.M, Bandarian, V, Drennan, C.L.
登録日2013-11-10
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.911 Å)
主引用文献Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism.
Nat.Chem.Biol., 10, 2014
5BWE
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BU of 5bwe by Molmil
Benzylsuccinate synthase alpha-beta-gamma complex with bound toluene and fumarate
分子名称: FUMARIC ACID, IRON/SULFUR CLUSTER, TOLUENE, ...
著者Funk, M.A, Drennan, C.L.
登録日2015-06-07
公開日2015-08-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Substrate-bound Structures of Benzylsuccinate Synthase Reveal How Toluene Is Activated in Anaerobic Hydrocarbon Degradation.
J.Biol.Chem., 290, 2015
5C8F
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BU of 5c8f by Molmil
Crystal structure of light-exposed full-length Thermus thermophilus CarH bound to cobalamin
分子名称: CHLORIDE ION, COBALAMIN, GLYCEROL, ...
著者Jost, M, Drennan, C.L.
登録日2015-06-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015
5C8A
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BU of 5c8a by Molmil
Crystal structure of a truncated form of Thermus thermophilus CarH bound to adenosylcobalamin (dark state)
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, GLYCEROL, ...
著者Jost, M, Drennan, C.L.
登録日2015-06-25
公開日2015-09-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015
5CI4
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BU of 5ci4 by Molmil
Ribonucleotide reductase beta subunit
分子名称: MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1, beta subunit, ...
著者Funk, M.A, Drennan, C.L.
登録日2015-07-10
公開日2016-06-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: E. coli Ribonucleotide Reductase As an Example.
J.Am.Chem.Soc., 138, 2016
5CJW
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BU of 5cjw by Molmil
Isobutyryl-CoA mutase fused with bound adenosylcobalamin, GDP, Mg (holo-IcmF/GDP), and substrate pivalyl-coenzyme A
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, GUANOSINE-5'-DIPHOSPHATE, ...
著者Jost, M, Drennan, C.L.
登録日2015-07-15
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural Basis for Substrate Specificity in Adenosylcobalamin-dependent Isobutyryl-CoA Mutase and Related Acyl-CoA Mutases.
J.Biol.Chem., 290, 2015
5CNV
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BU of 5cnv by Molmil
Crystal structure of the dATP inhibited E. coli class Ia ribonucleotide reductase complex bound to GDP and TTP at 3.20 Angstroms resolution
分子名称: 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Chen, P.Y.-T, Zimanyi, C.M, Funk, M.A, Drennan, C.L.
登録日2015-07-18
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Molecular basis for allosteric specificity regulation in class Ia ribonucleotide reductase from Escherichia coli.
Elife, 5, 2016
5C8E
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BU of 5c8e by Molmil
Crystal structure of Thermus thermophilus CarH bound to adenosylcobalamin and a 26-bp DNA segment
分子名称: 26-mer DNA segment containing the CarH operator sequence (antisense strand), 26-mer DNA segment containing the CarH operator sequence (sense strand), 5'-DEOXYADENOSINE, ...
著者Jost, M, Drennan, C.L.
登録日2015-06-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.89 Å)
主引用文献Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015
5BWD
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BU of 5bwd by Molmil
Benzylsuccinate alpha-gamma bound to fumarate
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FUMARIC ACID, TETRAETHYLENE GLYCOL, ...
著者Funk, M.A, Drennan, C.L.
登録日2015-06-07
公開日2015-08-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Substrate-bound Structures of Benzylsuccinate Synthase Reveal How Toluene Is Activated in Anaerobic Hydrocarbon Degradation.
J.Biol.Chem., 290, 2015
5C4I
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BU of 5c4i by Molmil
Structure of an Oxalate Oxidoreductase
分子名称: IRON/SULFUR CLUSTER, MAGNESIUM ION, Oxalate oxidoreductase subunit alpha, ...
著者Gibson, M.I, Brignole, E.J, Pierce, E, Can, M, Ragsdale, S.W, Drennan, C.L.
登録日2015-06-18
公開日2015-07-01
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.274 Å)
主引用文献The Structure of an Oxalate Oxidoreductase Provides Insight into Microbial 2-Oxoacid Metabolism.
Biochemistry, 54, 2015
5C8D
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BU of 5c8d by Molmil
Crystal structure of full-length Thermus thermophilus CarH bound to adenosylcobalamin (dark state)
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, Light-dependent transcriptional regulator CarH
著者Jost, M, Drennan, C.L.
登録日2015-06-25
公開日2015-09-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015

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