Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7ZXL
DownloadVisualize
BU of 7zxl by Molmil
H93A Mutant of Recombinant CODH-II
分子名称: Carbon monoxide dehydrogenase 2, FE (II) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
著者Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日2022-05-21
公開日2023-03-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix
Acs Catalysis, 2022
6G2G
DownloadVisualize
BU of 6g2g by Molmil
Fe-S assembly Cfd1
分子名称: Cytosolic Fe-S cluster assembly factor CFD1, IRON/SULFUR CLUSTER, SULFATE ION
著者Jeoung, J.H, Dobbek, H.
登録日2018-03-23
公開日2019-01-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Function and crystal structure of the dimeric P-loop ATPase CFD1 coordinating an exposed [4Fe-4S] cluster for transfer to apoproteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7YZM
DownloadVisualize
BU of 7yzm by Molmil
MgADPNP-bound DCCP:DCCP-R complex
分子名称: (R,R)-2,3-BUTANEDIOL, AMMONIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Jeoung, J.-H, Dobbek, H.
登録日2022-02-21
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structural basis for coupled ATP-driven electron transfer in the double-cubane cluster protein.
Proc.Natl.Acad.Sci.USA, 119, 2022
7YYL
DownloadVisualize
BU of 7yyl by Molmil
nucleotide-free DCCP:DCCP-R complex
分子名称: Dehydratase family protein, Double cubane cluster, IRON/SULFUR CLUSTER, ...
著者Jeoung, J.-H, Dobbek, H.
登録日2022-02-18
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structural basis for coupled ATP-driven electron transfer in the double-cubane cluster protein.
Proc.Natl.Acad.Sci.USA, 119, 2022
7YZQ
DownloadVisualize
BU of 7yzq by Molmil
MgADP-AlF4-bound DCCP:DCCP-R complex
分子名称: (R,R)-2,3-BUTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, AMMONIUM ION, ...
著者Jeoung, J.-H, Dobbek, H.
登録日2022-02-21
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural basis for coupled ATP-driven electron transfer in the double-cubane cluster protein.
Proc.Natl.Acad.Sci.USA, 119, 2022
4UTL
DownloadVisualize
BU of 4utl by Molmil
XenA - reduced - Y183F variant in complex with coumarin
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, COUMARIN, SULFATE ION, ...
著者Werther, T, Dobbek, H.
登録日2014-07-21
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.229 Å)
主引用文献Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Nat Commun, 8, 2017
4UTM
DownloadVisualize
BU of 4utm by Molmil
XenA - Reduced - Y183F variant in complex with 8-hydroxycoumarin
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 8-HYDROXYCOUMARIN, SULFATE ION, ...
著者Werther, T, Dobbek, H.
登録日2014-07-21
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Nat Commun, 8, 2017
4UR3
DownloadVisualize
BU of 4ur3 by Molmil
Crystal structure of the PCE reductive dehalogenase from S. multivorans P2(1) crystal form
分子名称: IRON/SULFUR CLUSTER, NORPSEUDO-B12, TETRACHLOROETHENE REDUCTIVE DEHALOGENASE CATALYTIC SUBUNIT
著者Bommer, M, Kunze, C, Fesseler, J, Schubert, T, Diekert, G, Dobbek, H.
登録日2014-06-25
公開日2014-10-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.235 Å)
主引用文献Structural Basis for Organohalide Respiration.
Science, 346, 2014
4UR1
DownloadVisualize
BU of 4ur1 by Molmil
Crystal structure of the PCE reductive dehalogenase from S. multivorans in complex with dibromoethene
分子名称: BENZAMIDINE, CIS-DIBROMOETHENE, GLYCEROL, ...
著者Bommer, M, Kunze, C, Fesseler, J, Schubert, T, Diekert, G, Dobbek, H.
登録日2014-06-25
公開日2014-10-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.649 Å)
主引用文献Structural Basis for Organohalide Respiration.
Science, 346, 2014
4UR2
DownloadVisualize
BU of 4ur2 by Molmil
Crystal structure of the PCE reductive dehalogenase from S. multivorans in complex with iodide
分子名称: GLYCEROL, IODIDE ION, IRON/SULFUR CLUSTER, ...
著者Bommer, M, Kunze, C, Fesseler, J, Schubert, T, Diekert, G, Dobbek, H.
登録日2014-06-25
公開日2014-10-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.096 Å)
主引用文献Structural Basis for Organohalide Respiration.
Science, 346, 2014
4UTJ
DownloadVisualize
BU of 4utj by Molmil
XenA - oxidized - Y183F variant in complex with 8-hydroxycoumarin
分子名称: 8-HYDROXYCOUMARIN, FLAVIN MONONUCLEOTIDE, NADH:flavin oxidoreductase, ...
著者Werther, T, Dobbek, H.
登録日2014-07-21
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Nat Commun, 8, 2017
3DGS
DownloadVisualize
BU of 3dgs by Molmil
Changing the determinants of protein stability from covalent to non-covalent interactions by in-vitro evolution: a structural and energetic analysis
分子名称: Coat protein A
著者Jakob, R.P, Kather, I, Dobbek, H, Schmid, F.X.
登録日2008-06-16
公開日2008-07-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Changing the determinants of protein stability from covalent to non-covalent interactions by in vitro evolution: a structural and energetic analysis.
J.Mol.Biol., 381, 2008
3DTM
DownloadVisualize
BU of 3dtm by Molmil
Increased folding stability of TEM-1 beta-lactamase by in-vitro selection
分子名称: Beta-lactamase
著者Kather, I, Jakob, R.P, Dobbek, H, Schmid, F.X.
登録日2008-07-15
公開日2008-08-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Increased folding stability of TEM-1 beta-lactamase by in vitro selection
J.Mol.Biol., 383, 2008
1Z02
DownloadVisualize
BU of 1z02 by Molmil
2-Oxoquinoline 8-Monooxygenase Component: Active site Modulation by Rieske-[2fe-2S] Center Oxidation/Reduction
分子名称: 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component, FE (III) ION, ...
著者Martins, B.M, Svetlitchnaia, T, Dobbek, H.
登録日2005-03-01
公開日2005-05-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献2-Oxoquinoline 8-Monooxygenase Oxygenase Component: Active Site Modulation by Rieske-[2Fe-2S] Center Oxidation/Reduction
Structure, 13, 2005
1Z03
DownloadVisualize
BU of 1z03 by Molmil
2-Oxoquinoline 8-Monooxygenase Component: Active site Modulation by Rieske-[2fe-2S] Center Oxidation/Reduction
分子名称: 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component, FE (III) ION, ...
著者Martins, B.M, Svetlitchnaia, T, Dobbek, H.
登録日2005-03-01
公開日2005-05-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献2-Oxoquinoline 8-Monooxygenase Oxygenase Component: Active Site Modulation by Rieske-[2Fe-2S] Center Oxidation/Reduction
Structure, 13, 2005
1Z01
DownloadVisualize
BU of 1z01 by Molmil
2-Oxoquinoline 8-Monooxygenase Component: Active site Modulation by Rieske-[2fe-2S] Center Oxidation/Reduction
分子名称: 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component, FE (III) ION, ...
著者Martins, B.M, Svetlitchnaia, T, Dobbek, H.
登録日2005-03-01
公開日2005-05-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献2-Oxoquinoline 8-Monooxygenase Oxygenase Component: Active Site Modulation by Rieske-[2Fe-2S] Center Oxidation/Reduction
Structure, 13, 2005
1ZXI
DownloadVisualize
BU of 1zxi by Molmil
Reconstituted CO dehydrogenase from Oligotropha carboxidovorans
分子名称: COPPER (II) ION, CU(I)-S-MO(VI)(=O)OH CLUSTER, Carbon monoxide dehydrogenase large chain, ...
著者Resch, M, Dobbek, H, Meyer, O.
登録日2005-06-08
公開日2005-10-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and functional reconstruction in situ of the [CuSMoO(2)] active site of carbon monoxide dehydrogenase from the carbon monoxide oxidizing eubacterium Oligotropha carboxidovorans
J.Biol.Inorg.Chem., 10, 2005
3HRD
DownloadVisualize
BU of 3hrd by Molmil
Crystal structure of nicotinate dehydrogenase
分子名称: CALCIUM ION, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Wagener, N, Pierik, A.J, Hille, R, Dobbek, H.
登録日2009-06-09
公開日2009-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Mo-Se active site of nicotinate dehydrogenase
Proc.Natl.Acad.Sci.USA, 106, 2009
3I39
DownloadVisualize
BU of 3i39 by Molmil
NI,FE-CODH-320 MV+CN state
分子名称: CYANIDE ION, Carbon monoxide dehydrogenase 2, FE (II) ION, ...
著者Jeoung, J.-H, Dobbek, H.
登録日2009-06-30
公開日2009-08-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Structural basis of cyanide inhibition of Ni, Fe-containing carbon monoxide dehydrogenase
J.Am.Chem.Soc., 131, 2009
8CJA
DownloadVisualize
BU of 8cja by Molmil
A225L/F231A variant of the CODH/ACS complex of C. hydrogenoformans
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CO-methylating acetyl-CoA synthase, ...
著者Ruickoldt, J, Jeoung, J, Lennartz, F, Dobbek, H.
登録日2023-02-13
公開日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A225L variant of the CODH/ACS complex of C. hydrogenoformans
To Be Published
8CJB
DownloadVisualize
BU of 8cjb by Molmil
A268M variant of the CODH/ACS complex of C. hydrogenoformans
分子名称: ACETATE ION, CO-methylating acetyl-CoA synthase, Carbon monoxide dehydrogenase, ...
著者Ruickoldt, J, Jeoung, J, Lennartz, F, Dobbek, H.
登録日2023-02-13
公開日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A225L variant of the CODH/ACS complex of C. hydrogenoformans
To Be Published
8CJC
DownloadVisualize
BU of 8cjc by Molmil
F515A variant of the CODH/ACS complex of C. hydrogenoformans
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CO-methylating acetyl-CoA synthase, ...
著者Ruickoldt, J, Jeoung, J, Lennartz, F, Dobbek, H.
登録日2023-02-13
公開日2024-02-21
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献A225L variant of the CODH/ACS complex of C. hydrogenoformans
To Be Published
8CMW
DownloadVisualize
BU of 8cmw by Molmil
A225L variant of the CODH/ACS complex of C. hydrogenoformans
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CO-methylating acetyl-CoA synthase, ...
著者Ruickoldt, J, Jeoung, J, Lennartz, F, Dobbek, H.
登録日2023-02-21
公開日2024-03-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A225L variant of the CODH/ACS complex of C. hydrogenoformans
To Be Published
7B7Q
DownloadVisualize
BU of 7b7q by Molmil
CooS-V with oxidized hybrid cluster
分子名称: 3,5-dioxa-7-thia-1-thionia-2$l^{2},4$l^{2},6$l^{3},8$l^{2}-tetraferrabicyclo[4.2.0]octane, Carbon monoxide dehydrogenase, DI(HYDROXYETHYL)ETHER, ...
著者Jeoung, J.H, Dobbek, H.
登録日2020-12-11
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献A Morphing [4Fe-3S-nO]-Cluster within a Carbon Monoxide Dehydrogenase Scaffold.
Angew.Chem.Int.Ed.Engl., 61, 2022
7B7T
DownloadVisualize
BU of 7b7t by Molmil
CooS-V with oxidized hybrid cluster
分子名称: (R,R)-2,3-BUTANEDIOL, Carbon monoxide dehydrogenase, DI(HYDROXYETHYL)ETHER, ...
著者Jeoung, J.H, Dobbek, H.
登録日2020-12-11
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献A Morphing [4Fe-3S-nO]-Cluster within a Carbon Monoxide Dehydrogenase Scaffold.
Angew.Chem.Int.Ed.Engl., 61, 2022

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon