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4UW8
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BU of 4uw8 by Molmil
Structure of the carboxy-terminal domain of the bacteriophage T5 L- shaped tail fiber with its intra-molecular chaperone domain
分子名称: CITRATE ANION, L-SHAPED TAIL FIBER PROTEIN
著者Garcia-Doval, C, Luque, D, Caston, J.R, Otero, J.M, Llamas-Saiz, A.L, Boulanger, P, van Raaij, M.J.
登録日2014-08-08
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structure of the Receptor-Binding Carboxy-Terminal Domain of the Bacteriophage T5 L-Shaped Tail Fibre with and without Its Intra-Molecular Chaperone.
Viruses, 7, 2015
4UW7
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Structure of the carboxy-terminal domain of the bacteriophage T5 L- shaped tail fiber without its intra-molecular chaperone domain
分子名称: GLYCEROL, L-SHAPED TAIL FIBER PROTEIN
著者Garcia-Doval, C, Luque, D, Caston, J.R, Otero, J.M, Llamas-Saiz, A.L, Boulanger, P, van Raaij, M.J.
登録日2014-08-08
公開日2015-08-05
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structure of the Receptor-Binding Carboxy-Terminal Domain of the Bacteriophage T5 L-Shaped Tail Fibre with and without Its Intra-Molecular Chaperone.
Viruses, 7, 2015
3TN9
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BU of 3tn9 by Molmil
X-ray structure of the HRV2 empty capsid (B-particle)
分子名称: Protein VP1, Protein VP2, Protein VP3
著者Garriga, D, Pickl-Herk, A, Luque, D, Wruss, J, Caston, J.R, Blaas, D, Verdaguer, N.
登録日2011-09-01
公開日2012-03-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Insights into minor group rhinovirus uncoating: the X-ray structure of the HRV2 empty capsid.
Plos Pathog., 8, 2012
6Z8E
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BU of 6z8e by Molmil
Human Picobirnavirus Ht-CP VLP
分子名称: Capsid protein precursor
著者Ortega-Esteban, A, Mata, C.P, Rodriguez-Espinosa, M.J, Luque, D, Irigoyen, N, Rodriguez, J.M, de Pablo, P.J, Caston, J.R.
登録日2020-06-02
公開日2020-09-23
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Cryo-electron Microscopy Structure, Assembly, and Mechanics Show Morphogenesis and Evolution of Human Picobirnavirus.
J.Virol., 94, 2020
7BCV
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BU of 7bcv by Molmil
Brevibacterium linens encapsulin structure
分子名称: Linocin-M18
著者Allende-Ballestero, C, Luque, D, Klem, R, Cornelissen, J.J.L.M, Caston, J.R.
登録日2020-12-21
公開日2022-10-05
実験手法ELECTRON MICROSCOPY (2.28 Å)
主引用文献Three-dimensional cryoEM structure of Brevibacterium linens encapsulin
To Be Published
5ND1
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BU of 5nd1 by Molmil
Viral evolution results in multiple, surface-allocated enzymatic activities in a fungal double-stranded RNA virus
分子名称: Capsid protein
著者Mata, C.P, Luque, D, Gomez Blanco, J, Rodriguez, J.M, Suzuki, N, Ghabrial, S.A, Carrascosa, J.L, Trus, B.L, Caston, J.R.
登録日2017-03-07
公開日2017-11-29
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Acquisition of functions on the outer capsid surface during evolution of double-stranded RNA fungal viruses.
PLoS Pathog., 13, 2017
7Z5E
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BU of 7z5e by Molmil
VP2-only capsid of MVM D263A mutant
分子名称: Capsid protein VP1
著者Luque, D, Ortega-Esteban, A, Valbuena, A, Vilas, J.L, Rodriguez-Huete, A, Mateu, M.G, Caston, J.R.
登録日2022-03-09
公開日2023-03-08
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Equilibrium Dynamics of a Biomolecular Complex Analyzed at Single-amino Acid Resolution by Cryo-electron Microscopy.
J.Mol.Biol., 435, 2023
7Z5F
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BU of 7z5f by Molmil
VP2-only capsid of MVM D263A mutant
分子名称: Capsid protein VP1
著者Luque, D, Ortega-Esteban, A, Valbuena, A, Vilas, J.L, Rodriguez-Huete, A, Mateu, M.G, Caston, J.R.
登録日2022-03-09
公開日2023-03-08
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Equilibrium Dynamics of a Biomolecular Complex Analyzed at Single-amino Acid Resolution by Cryo-electron Microscopy.
J.Mol.Biol., 435, 2023
7Z5D
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BU of 7z5d by Molmil
VP2-only capsid of wt MVM prototype strain p
分子名称: Capsid protein VP1
著者Luque, D, Ortega-Esteban, A, Valbuena, A, Vilas, J.L, Rodriguez-Huete, A, Mateu, M.G, Caston, J.R.
登録日2022-03-09
公開日2023-03-08
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Equilibrium Dynamics of a Biomolecular Complex Analyzed at Single-amino Acid Resolution by Cryo-electron Microscopy.
J.Mol.Biol., 435, 2023
2XVR
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BU of 2xvr by Molmil
Phage T7 empty mature head shell
分子名称: MAJOR CAPSID PROTEIN 10A
著者Ionel, A, Velazquez-Muriel, J.A, Luque, D, Cuervo, A, Caston, J.R, Valpuesta, J.M, Martin-Benito, J, Carrascosa, J.L.
登録日2010-10-28
公開日2010-12-01
最終更新日2018-10-03
実験手法ELECTRON MICROSCOPY (10.8 Å)
主引用文献Molecular Rearrangements Involved in the Capsid Shell Maturation of Bacteriophage T7.
J.Biol.Chem., 286, 2011
3ZUE
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BU of 3zue by Molmil
Rabbit Hemorrhagic Disease Virus (RHDV)capsid protein
分子名称: CAPSID STRUCTURAL PROTEIN VP60
著者Luque, D, Gonzalez, J.M, Gomez-Blanco, J, Marabini, R, Chichon, J, Mena, I, Angulo, I, Carrascosa, J.L, Verdaguer, N, Trus, B.L, Barcena, J, Caston, J.R.
登録日2011-07-18
公開日2012-05-23
最終更新日2018-10-03
実験手法ELECTRON MICROSCOPY (10.3 Å)
主引用文献Epitope Insertion at the N-Terminal Molecular Switch of the Rabbit Hemorrhagic Disease Virus T=3 Capsid Protein Leads to Larger T=4 Capsids.
J.Virol., 86, 2012
2GSY
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BU of 2gsy by Molmil
The 2.6A structure of Infectious Bursal Virus Derived T=1 Particles
分子名称: CALCIUM ION, polyprotein
著者Garriga, D, Querol-Audi, J, Abaitua, F, Saugar, I, Pous, J, Verdaguer, N, Caston, J.R, Rodriguez, J.F.
登録日2006-04-27
公開日2006-07-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The 2.6-angstrom structure of infectious bursal disease virus-derived t=1 particles reveals new stabilizing elements of the virus capsid.
J.Virol., 80, 2006
6Z8F
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BU of 6z8f by Molmil
Human Picobirnavirus D45-CP VLP
分子名称: Capsid protein precursor
著者Ortega-Esteban, A, Mata, C.P, Rodriguez-Espinosa, M.J, Luque, D, Irigoyen, N, Rodriguez, J.M, de Pablo, P.J, Caston, J.R.
登録日2020-06-02
公開日2020-09-16
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Cryo-electron Microscopy Structure, Assembly, and Mechanics Show Morphogenesis and Evolution of Human Picobirnavirus.
J.Virol., 94, 2020
6Z8D
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BU of 6z8d by Molmil
Human Picobirnavirus CP VLP
分子名称: Capsid protein precursor
著者Ortega-Esteban, A, Mata, C.P, Rodriguez-Espinosa, M.J, Luque, D, Irigoyen, N, Rodriguez, J.M, de Pablo, P.J, Caston, J.R.
登録日2020-06-02
公開日2020-09-23
最終更新日2020-12-02
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献Cryo-electron Microscopy Structure, Assembly, and Mechanics Show Morphogenesis and Evolution of Human Picobirnavirus.
J.Virol., 94, 2020
3FBM
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BU of 3fbm by Molmil
D431N Mutant VP2 Protein of Infectious Bursal Disease Virus; Derived T=1 Particles
分子名称: CALCIUM ION, Polyprotein
著者Irigoyen, N, Garriga, D, Navarro, A, Verdaguer, N, Rodriguez, J.F, Caston, J.R.
登録日2008-11-19
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Autoproteolytic Activity Derived from the Infectious Bursal Disease Virus Capsid Protein
J.Biol.Chem., 284, 2009
3GF5
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BU of 3gf5 by Molmil
Crystal structure of the P21 R1-R7 N-terminal domain of murine MVP
分子名称: GLYCEROL, Major vault protein
著者Querol-Audi, J, Casanas, A, Luque, D, Caston, J.R, Fita, I, Verdaguer, N.
登録日2009-02-26
公開日2009-11-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The mechanism of vault opening from the high resolution structure of the N-terminal repeats of MVP
Embo J., 28, 2009
3J3I
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BU of 3j3i by Molmil
Penicillium chrysogenum virus (PcV) capsid structure
分子名称: Capsid protein
著者Luque, D, Gomez-Blanco, J, Garriga, D, Brilot, A, Gonzalez, J.M, Havens, W.H, Carrascosa, J.L, Trus, B.L, Verdaguer, N, Grigorieff, N, Ghabrial, S.A, Caston, J.R.
登録日2013-03-08
公開日2014-05-14
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Cryo-EM near-atomic structure of a dsRNA fungal virus shows ancient structural motifs preserved in the dsRNA viral lineage.
Proc.Natl.Acad.Sci.USA, 111, 2014
3GNG
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BU of 3gng by Molmil
P21B crystal structure of R1-R7 of Murine MVP
分子名称: Major vault protein
著者Querol-Audi, J, Casanas, A, Uson, I, Caston, J.R, Fita, I, Verdaguer, N.
登録日2009-03-17
公開日2009-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The mechanism of vault opening from the high resolution structure of the N-terminal repeats of MVP
Embo J., 28, 2009
4ZIU
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BU of 4ziu by Molmil
Crystal structure of native alpha-2-macroglobulin from Escherichia coli spanning the residues from domain MG7 to the C-terminus.
分子名称: GLYCEROL, NICKEL (II) ION, Uncharacterized lipoprotein YfhM
著者Garcia-Ferrer, I, Arede, P, Gomez-Blanco, J, Luque, D, Duquerroy, S, Caston, J.R, Goulas, T, Gomis-Ruth, X.F.
登録日2015-04-28
公開日2015-06-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and functional insights into Escherichia coli alpha 2-macroglobulin endopeptidase snap-trap inhibition.
Proc.Natl.Acad.Sci.USA, 112, 2015
3GNF
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BU of 3gnf by Molmil
P1 Crystal structure of the N-terminal R1-R7 of murine MVP
分子名称: Major vault protein
著者Querol-Audi, J, Casanas, A, Uson, I, Luque, D, Caston, J.R, Fita, I, Verdaguer, N.
登録日2009-03-17
公開日2009-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The mechanism of vault opening from the high resolution structure of the N-terminal repeats of MVP
Embo J., 28, 2009
4ZJH
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BU of 4zjh by Molmil
Crystal structure of native alpha-2-macroglobulin from Escherichia coli spanning domains NIE-MG1.
分子名称: ACETATE ION, GLYCEROL, alpha-2-Macroglobulin
著者Garcia-Ferrer, I, Arede, P, Gomez-Blanco, J, Luque, D, Duquerroy, S, Caston, J.R, Goulas, T, Gomis-Ruth, X.F.
登録日2015-04-29
公開日2015-06-10
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and functional insights into Escherichia coli alpha 2-macroglobulin endopeptidase snap-trap inhibition.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZIQ
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BU of 4ziq by Molmil
Crystal structure of trypsin activated alpha-2-macroglobulin from Escherichia coli.
分子名称: CHLORIDE ION, GLYCEROL, Uncharacterized lipoprotein YfhM
著者Garcia-Ferrer, I, Arede, P, Gomez-Blanco, J, Luque, D, Duquerroy, S, Caston, J.R, Goulas, T, Gomis-Ruth, X.F.
登録日2015-04-28
公開日2015-06-10
最終更新日2015-07-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural and functional insights into Escherichia coli alpha 2-macroglobulin endopeptidase snap-trap inhibition.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZJG
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BU of 4zjg by Molmil
Crystal structure of native alpha-2-macroglobulin from Escherichia coli spanning domains MG0-NIE-MG1.
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, PENTAETHYLENE GLYCOL, ...
著者Garcia-Ferrer, I, Arede, P, Gomez-Blanco, J, Luque, D, Duquerroy, S, Caston, J.R, Goulas, T, Gomis-Ruth, X.F.
登録日2015-04-29
公開日2015-06-10
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and functional insights into Escherichia coli alpha 2-macroglobulin endopeptidase snap-trap inhibition.
Proc.Natl.Acad.Sci.USA, 112, 2015
5A42
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BU of 5a42 by Molmil
Cryo-EM single particle 3D reconstruction of the native conformation of E. coli alpha-2-macroglobulin (ECAM)
分子名称: UNCHARACTERIZED LIPOPROTEIN YFHM
著者Garcia-Ferrer, I, Arede, P, Gomez-Blanco, J, Luque, D, Duquerroy, S, Caston, J.R, Goulas, T, Gomis-Ruth, F.X.
登録日2015-06-04
公開日2015-07-29
最終更新日2017-08-23
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献Structural and Functional Insights Into Escherichia Coli Alpha2- Macroglobulin Endopeptidase Snap-Trap Inhibition.
Proc.Natl.Acad.Sci.USA, 112, 2015
3IZG
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BU of 3izg by Molmil
Bacteriophage T7 prohead shell EM-derived atomic model
分子名称: Major capsid protein 10A
著者Ionel, A, Velazquez-Muriel, J.A, Agirrezabala, X, Luque, D, Cuervo, A, Caston, J.R, Valpuesta, J.M, Martin-Benito, J, Carrascosa, J.L.
登録日2010-10-27
公開日2010-11-17
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (10.9 Å)
主引用文献Molecular rearrangements involved in the capsid shell maturation of bacteriophage T7.
J.Biol.Chem., 286, 2011

 

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