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4YL7
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BU of 4yl7 by Molmil
Crystal structure of the indole prenyltransferase MpnD from Marinactinospora thermotolerans
Descriptor: Aromatic prenyltransferase
Authors:Mori, T, Morita, H, Abe, I.
Deposit date:2015-03-05
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
8JMR
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BU of 8jmr by Molmil
Crystal structure of hinokiresinol synthase in complex with 1,7-bis(4-hydroxyphenyl)hepta-1,6-dien-3-one
Descriptor: 1,7-bis(4-hydroxyphenyl)hepta-1,6-dien-3-one, Hinokiresinol synthase alpha subunit, Hinokiresinol synthase beta subunit, ...
Authors:Ding, Y, Ushimaru, R, Mori, T, Abe, I.
Deposit date:2023-06-05
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and Mechanistic Insights into the C-C Bond-Forming Rearrangement Reaction Catalyzed by Heterodimeric Hinokiresinol Synthase.
J.Am.Chem.Soc., 145, 2023
8JMQ
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BU of 8jmq by Molmil
Crystal structure of hinokiresinol synthase
Descriptor: Hinokiresinol synthase alpha subunit, Hinokiresinol synthase beta subunit
Authors:Ding, Y, Ushimaru, R, Mori, T, Abe, I.
Deposit date:2023-06-05
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Mechanistic Insights into the C-C Bond-Forming Rearrangement Reaction Catalyzed by Heterodimeric Hinokiresinol Synthase.
J.Am.Chem.Soc., 145, 2023
3WXZ
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BU of 3wxz by Molmil
The structure of the I375F mutant of CsyB
Descriptor: Putative uncharacterized protein csyB
Authors:Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
Deposit date:2014-08-13
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
3WY0
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BU of 3wy0 by Molmil
The I375W mutant of CsyB complexed with CoA-SH
Descriptor: COENZYME A, Putative uncharacterized protein csyB
Authors:Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
Deposit date:2014-08-13
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
3WXY
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BU of 3wxy by Molmil
Crystal structure of CsyB complexed with CoA-SH
Descriptor: COENZYME A, Putative uncharacterized protein csyB
Authors:Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
Deposit date:2014-08-13
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.706 Å)
Cite:Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
5YK9
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BU of 5yk9 by Molmil
Crystal structure of selenomethionine-labelled indole prenyltransferase AmbP1
Descriptor: AmbP1
Authors:Awakawa, T, Nakashima, Y, Liu, X, Abe, I.
Deposit date:2017-10-12
Release date:2018-06-06
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1
Angew. Chem. Int. Ed. Engl., 57, 2018
7VTA
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BU of 7vta by Molmil
Talaromyces verruculosus talaropentaene synthase apo
Descriptor: TvTS cyclase domain
Authors:Hui, T, Mori, T, Abe, I.
Deposit date:2021-10-28
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of non-squalene triterpenes.
Nature, 606, 2022
7VTB
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BU of 7vtb by Molmil
Partially closed conformation of talaropentaene synthase cyclase domain
Descriptor: NICKEL (II) ION, TvTS cyclase domain
Authors:Hui, T, Mori, T, Abe, I.
Deposit date:2021-10-28
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of non-squalene triterpenes.
Nature, 606, 2022
7WIJ
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BU of 7wij by Molmil
Cryo-EM structure of prenyltransferase domain of Macrophoma phaseolina macrophomene synthase
Descriptor: Geranylgeranyl diphosphate synthase
Authors:Mori, T, Adachi, N, Abe, I.
Deposit date:2022-01-03
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Discovery of non-squalene triterpenes.
Nature, 606, 2022
7WPY
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BU of 7wpy by Molmil
AndA_M119A_N121V variant
Descriptor: Dioxygenase andA, FE (III) ION
Authors:Mori, T, Chen, H, Abe, I.
Deposit date:2022-01-24
Release date:2023-02-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:AndA_M119A_N121V variant
To Be Published
7YN1
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BU of 7yn1 by Molmil
Crystal structure of selenomethionine labeled CcbD
Descriptor: CcbD
Authors:Mori, T, Kadlcik, S, Abe, I.
Deposit date:2022-07-29
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of selenomethionine labeled CcbD
To Be Published
7YN3
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BU of 7yn3 by Molmil
Crystal structure of CcbD complex with CcbZ carrier protein domain
Descriptor: 1,1'-ethane-1,2-diyldipyrrolidine-2,5-dione, 4'-PHOSPHOPANTETHEINE, CcbD, ...
Authors:Mori, T, Lyu, S, Abe, I.
Deposit date:2022-07-29
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of CcbD complex with carrier protein
To Be Published
7YN2
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BU of 7yn2 by Molmil
Crystal structure of CcbD with methylthiolincosamide
Descriptor: (2R,3R,4S,5R,6R)-2-[(1R,2R)-1-azanyl-2-oxidanyl-propyl]-6-methylsulfanyl-oxane-3,4,5-triol, CcbD
Authors:Mori, T, Lyu, S, Abe, I.
Deposit date:2022-07-29
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of CcbD with methylthiolincosamide
To Be Published
5GK2
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BU of 5gk2 by Molmil
The structure of the H302A mutant of StlD
Descriptor: Ketosynthase StlD
Authors:Mori, T, Dngfeng, Y, Morita, H, Abe, I.
Deposit date:2016-07-03
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structural Insight into the Enzymatic Formation of Bacterial Stilbene.
Cell Chem Biol, 23, 2016
5GK0
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BU of 5gk0 by Molmil
Crystal structure of selnomethionin-labeled ketosynthase StlD
Descriptor: Ketosynthase StlD
Authors:Mori, T, Saito, Y, Morita, H, Abe, I.
Deposit date:2016-07-03
Release date:2017-07-05
Last modified:2019-01-16
Method:X-RAY DIFFRACTION (2.331 Å)
Cite:Structural Insight into the Enzymatic Formation of Bacterial Stilbene.
Cell Chem Biol, 23, 2016
5GK1
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BU of 5gk1 by Molmil
Crystal structure of the ketosynthase StlD complexed with substrate
Descriptor: 3-OXO-5-METHYLHEXANOIC ACID, Ketosynthase StlD
Authors:Mori, T, Saito, Y, Morita, H, Abe, I.
Deposit date:2016-07-03
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural Insight into the Enzymatic Formation of Bacterial Stilbene.
Cell Chem Biol, 23, 2016
3WD7
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BU of 3wd7 by Molmil
Type III polyketide synthase
Descriptor: COENZYME A, NICKEL (II) ION, SULFATE ION, ...
Authors:Mori, T, Shimokawa, Y, Matsui, T, Kato, R, Sugio, S, Morita, H, Abe, I.
Deposit date:2013-06-10
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Cloning, characterization, and crystal structure analysis of novel type III polyketide synthases from Citrus microcarpa
To be Published
3WD8
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BU of 3wd8 by Molmil
TypeIII polyketide synthases
Descriptor: GLYCEROL, Type III polyketide synthase quinolone synthase
Authors:Mori, T, Shimokawa, Y, Matsui, T, Morita, H, Abe, I.
Deposit date:2013-06-10
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.463 Å)
Cite:Cloning, characterization, and crystal structure analysis of novel type III polyketide synthases from Citrus microcarpa
To be Published
3X27
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BU of 3x27 by Molmil
Structure of McbB in complex with tryptophan
Descriptor: Cucumopine synthase, TRYPTOPHAN
Authors:Mori, T, Sahashi, S, Morita, H, Abe, I.
Deposit date:2014-12-10
Release date:2015-10-28
Last modified:2015-11-04
Method:X-RAY DIFFRACTION (2.481 Å)
Cite:Structural Basis for beta-Carboline Alkaloid Production by the Microbial Homodimeric Enzyme McbB
Chem.Biol., 22, 2015
4YZK
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BU of 4yzk by Molmil
Crystal structure of the indole prenyltransferase TleC apo structure
Descriptor: Tryptophan dimethylallyltransferase
Authors:Mori, T, Morita, H, Abe, I.
Deposit date:2015-03-25
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
4YZL
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BU of 4yzl by Molmil
Crystal structure of the indole prenyltransferase TleC complexed with indolactam V and DMSPP
Descriptor: (2S,5S)-5-(hydroxymethyl)-1-methyl-2-(propan-2-yl)-1,2,4,5,6,8-hexahydro-3H-[1,4]diazonino[7,6,5-cd]indol-3-one, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Tryptophan dimethylallyltransferase
Authors:Mori, T, Morita, H, Abe, I.
Deposit date:2015-03-25
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.096 Å)
Cite:Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
4YZJ
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BU of 4yzj by Molmil
Crystal structure of selnomethionin-labeled indole prenyltransferase TleC
Descriptor: Tryptophan dimethylallyltransferase
Authors:Mori, T, Matsui, T, Morita, H, Abe, I.
Deposit date:2015-03-25
Release date:2016-03-16
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (2.106 Å)
Cite:Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
7VBR
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BU of 7vbr by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxI
Descriptor: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxI
Authors:Li, X, Awakawa, T, Mori, T, Abe, I.
Deposit date:2021-09-01
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Heterodimeric Non-heme Iron Enzymes in Fungal Meroterpenoid Biosynthesis.
J.Am.Chem.Soc., 143, 2021
7VBQ
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BU of 7vbq by Molmil
Heterodimer structure of Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxIJ
Descriptor: FE (III) ION, Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxI, Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxJ, ...
Authors:Li, X, Awakawa, T, Mori, T, Abe, I.
Deposit date:2021-09-01
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Heterodimeric Non-heme Iron Enzymes in Fungal Meroterpenoid Biosynthesis.
J.Am.Chem.Soc., 143, 2021

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