8GXX
 
 | | 3 nucleotide-bound V1EG of V/A-ATPase from Thermus thermophilus. | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | | Authors: | Nakanishi, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-09-21 | | Release date: | 2023-01-25 | | Last modified: | 2023-02-15 | | Method: | ELECTRON MICROSCOPY (3 Å) | | Cite: | Cryo-EM analysis of V/A-ATPase intermediates reveals the transition of the ground-state structure to steady-state structures by sequential ATP binding.
J.Biol.Chem., 299, 2023
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8GXY
 | | 2 sulfate-bound V1EG of V/A-ATPase from Thermus thermophilus. | | Descriptor: | SULFATE ION, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ... | | Authors: | Nakanishi, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-09-21 | | Release date: | 2023-01-25 | | Last modified: | 2023-02-15 | | Method: | ELECTRON MICROSCOPY (2.8 Å) | | Cite: | Cryo-EM analysis of V/A-ATPase intermediates reveals the transition of the ground-state structure to steady-state structures by sequential ATP binding.
J.Biol.Chem., 299, 2023
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8GXU
 | | 1 ATP-bound V1EG of V/A-ATPase from Thermus thermophilus | | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, SULFATE ION, V-type ATP synthase alpha chain, ... | | Authors: | Nakanishi, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-09-21 | | Release date: | 2023-01-25 | | Last modified: | 2023-02-15 | | Method: | ELECTRON MICROSCOPY (2.5 Å) | | Cite: | Cryo-EM analysis of V/A-ATPase intermediates reveals the transition of the ground-state structure to steady-state structures by sequential ATP binding.
J.Biol.Chem., 299, 2023
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8HH4
 | | F1 domain of FoF1-ATPase from Bacillus PS3,101 degrees, highATP | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ... | | Authors: | Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-11-16 | | Release date: | 2023-07-19 | | Method: | ELECTRON MICROSCOPY (3.1 Å) | | Cite: | Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
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8HHA
 | | F1 domain of FoF1-ATPase from Bacillus PS3,120 degrees,lowATP | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ... | | Authors: | Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-11-16 | | Release date: | 2023-07-19 | | Method: | ELECTRON MICROSCOPY (3.4 Å) | | Cite: | Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
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8HH3
 | | F1 domain of FoF1-ATPase from Bacillus PS3,90 degrees,highATP | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ... | | Authors: | Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-11-16 | | Release date: | 2023-07-19 | | Method: | ELECTRON MICROSCOPY (4.3 Å) | | Cite: | Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
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8HH1
 | | FoF1-ATPase from Bacillus PS3, 81 degrees, highATP | | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ATP synthase subunit alpha, ... | | Authors: | Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-11-16 | | Release date: | 2023-07-19 | | Method: | ELECTRON MICROSCOPY (2.9 Å) | | Cite: | Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
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8HHB
 | | F1 domain of FoF1-ATPase from Bacillus PS3,step waiting,lowATP | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ... | | Authors: | Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-11-16 | | Release date: | 2023-07-19 | | Method: | ELECTRON MICROSCOPY (3.5 Å) | | Cite: | Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
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8HH9
 | | F1 domain of FoF1-ATPase from Bacillus PS3, 90 degrees, low ATP | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ... | | Authors: | Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-11-16 | | Release date: | 2023-07-19 | | Method: | ELECTRON MICROSCOPY (3.6 Å) | | Cite: | Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
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8HH2
 | | F1 domain of FoF1-ATPase from Bacillus PS3,post-hyd,highATP | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ... | | Authors: | Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-11-16 | | Release date: | 2023-07-19 | | Method: | ELECTRON MICROSCOPY (3 Å) | | Cite: | Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
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8HHC
 | | F1 domain of FoF1-ATPase from Bacillus PS3,post-hyd',lowATP | | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ATP synthase subunit alpha, ... | | Authors: | Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-11-16 | | Release date: | 2023-07-19 | | Method: | ELECTRON MICROSCOPY (3.3 Å) | | Cite: | Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
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8HH6
 | | F1 domain of FoF1-ATPase from Bacillus PS3,step waiting,highATP | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ... | | Authors: | Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-11-16 | | Release date: | 2023-07-26 | | Method: | ELECTRON MICROSCOPY (2.9 Å) | | Cite: | Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
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8HH7
 | | F1 domain of FoF1-ATPase from Bacillus PS3, 81 degrees, lowATP | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ... | | Authors: | Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-11-16 | | Release date: | 2023-07-26 | | Method: | ELECTRON MICROSCOPY (2.5 Å) | | Cite: | Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
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8HH8
 | | F1 domain of FoF1-ATPase from Bacillus PS3,post-hyd,lowATP | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ... | | Authors: | Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-11-16 | | Release date: | 2023-07-26 | | Method: | ELECTRON MICROSCOPY (2.8 Å) | | Cite: | Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
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8HH5
 | | F1 domain of FoF1-ATPase from Bacillus PS3,120 degrees,highATP | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ... | | Authors: | Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-11-16 | | Release date: | 2023-07-26 | | Method: | ELECTRON MICROSCOPY (2.9 Å) | | Cite: | Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
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7XKO
 | | F1 domain of epsilon C-terminal domain deleted FoF1 from Bacillus PS3,state1,nucleotide depeleted | | Descriptor: | ATP synthase gamma chain, ATP synthase subunit alpha, ATP synthase subunit beta, ... | | Authors: | Nakano, A, Kishikawa, J, Nakanishi, A, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-04-20 | | Release date: | 2022-09-21 | | Last modified: | 2023-10-11 | | Method: | ELECTRON MICROSCOPY (3.4 Å) | | Cite: | Structural basis of unisite catalysis of bacterial F 0 F 1 -ATPase.
Pnas Nexus, 1, 2022
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7XKR
 | | F1 domain of FoF1-ATPase with the up form of epsilon subunit from Bacillus PS3 | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... | | Authors: | Nakano, A, Kishikawa, J, Nakanishi, A, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-04-20 | | Release date: | 2022-09-21 | | Last modified: | 2023-10-11 | | Method: | ELECTRON MICROSCOPY (2.6 Å) | | Cite: | Structural basis of unisite catalysis of bacterial F 0 F 1 -ATPase.
Pnas Nexus, 1, 2022
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7XKP
 | | F1 domain of epsilon C-terminal domain deleted FoF1 from Bacillus PS3,state1,unisite condition | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ATP synthase gamma chain, ATP synthase subunit alpha, ... | | Authors: | Nakano, A, Kishikawa, J, Nakanishi, A, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-04-20 | | Release date: | 2022-09-21 | | Last modified: | 2023-10-11 | | Method: | ELECTRON MICROSCOPY (3 Å) | | Cite: | Structural basis of unisite catalysis of bacterial F 0 F 1 -ATPase.
Pnas Nexus, 1, 2022
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7XKH
 | | Nucleotide-depleted F1 domain of FoF1-ATPase from Bacillus PS3, state1 | | Descriptor: | ATP synthase epsilon chain, ATP synthase gamma chain, ATP synthase subunit alpha, ... | | Authors: | Nakano, A, Kishikawa, J, Nakanishi, A, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-04-19 | | Release date: | 2022-09-21 | | Last modified: | 2023-10-11 | | Method: | ELECTRON MICROSCOPY (3.1 Å) | | Cite: | Structural basis of unisite catalysis of bacterial F 0 F 1 -ATPase.
Pnas Nexus, 1, 2022
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7XKQ
 | | F1 domain of FoF1-ATPase with the down form of epsilon subunit from Bacillus PS3 | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... | | Authors: | Nakano, A, Kishikawa, J, Nakanishi, A, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2022-04-20 | | Release date: | 2022-09-21 | | Last modified: | 2023-10-11 | | Method: | ELECTRON MICROSCOPY (3.3 Å) | | Cite: | Structural basis of unisite catalysis of bacterial F 0 F 1 -ATPase.
Pnas Nexus, 1, 2022
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1IU4
 | | Crystal Structure Analysis of the Microbial Transglutaminase | | Descriptor: | microbial transglutaminase | | Authors: | Kashiwagi, T, Yokoyama, K, Ishikawa, K, Ono, K, Ejima, D, Matsui, H, Suzuki, E. | | Deposit date: | 2002-02-27 | | Release date: | 2002-08-27 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Crystal structure of microbial transglutaminase from Streptoverticillium mobaraense
J.Biol.Chem., 277, 2002
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7VAU
 | | V1EG of V/A-ATPase from Thermus thermophilus at low ATP concentration, state2-2 | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | | Authors: | Kishikawa, J, Nakanishi, A, Nakano, A, Saeki, S, Furuta, A, Kato, T, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2021-08-30 | | Release date: | 2022-07-13 | | Method: | ELECTRON MICROSCOPY (3.3 Å) | | Cite: | Structural snapshots of V/A-ATPase reveal the rotary catalytic mechanism of rotary ATPases.
Nat Commun, 13, 2022
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7VAK
 | | Nucleotide-free V1EG domain of V/A-ATPase from Thermus thermophilus, state2 | | Descriptor: | V-type ATP synthase alpha chain, V-type ATP synthase beta chain, V-type ATP synthase subunit D, ... | | Authors: | Kishikawa, J, Nakanishi, A, Nakano, A, Saeki, S, Furuta, A, Kato, T, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2021-08-30 | | Release date: | 2022-07-13 | | Method: | ELECTRON MICROSCOPY (4.7 Å) | | Cite: | Structural snapshots of V/A-ATPase reveal the rotary catalytic mechanism of rotary ATPases.
Nat Commun, 13, 2022
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7VAW
 | | V1EG domain of V/A-ATPase from Thermus thermophilus at saturated ATP-gamma-S condition, state1-1 | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... | | Authors: | Kishikawa, J, Nakanishi, A, Nakano, A, Saeki, S, Furuta, A, Kato, T, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2021-08-30 | | Release date: | 2022-07-13 | | Method: | ELECTRON MICROSCOPY (2.7 Å) | | Cite: | Structural snapshots of V/A-ATPase reveal the rotary catalytic mechanism of rotary ATPases.
Nat Commun, 13, 2022
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7VAP
 | | V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state2-2 | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | | Authors: | Kishikawa, J, Nakanishi, A, Nakano, A, Saeki, S, Furuta, A, Kato, T, Mitsuoka, K, Yokoyama, K. | | Deposit date: | 2021-08-30 | | Release date: | 2022-07-13 | | Method: | ELECTRON MICROSCOPY (3 Å) | | Cite: | Structural snapshots of V/A-ATPase reveal the rotary catalytic mechanism of rotary ATPases.
Nat Commun, 13, 2022
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