Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7EMT
DownloadVisualize
BU of 7emt by Molmil
Crystal Structure of the HasAp V37G Mutant Capturing Iron Tetraphenylporphyrin
分子名称: Heme acquisition protein HasAp, [5,10,15,20-tetraphenylporphyrinato(2-)-kappa~4~N~21~,N~22~,N~23~,N~24~]iron
著者Shisaka, Y, Sakakibara, E, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
7EMP
DownloadVisualize
BU of 7emp by Molmil
Crystal Structure of HasAp Capturing Chromium Tetraphenylporphyrin
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, GLYCEROL, ...
著者Shisaka, Y, Sakakibara, E, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
7EMV
DownloadVisualize
BU of 7emv by Molmil
Crystal Structure of the HasAp V37G Mutant Capturing Iron-5,10,15-Triphenylporphyrin
分子名称: 5,10,15-Triphenylporphyrin cpntaining FE, GLYCEROL, Heme acquisition protein HasAp, ...
著者Shisaka, Y, Sakakibara, E, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
7EMO
DownloadVisualize
BU of 7emo by Molmil
Crystal Structure of HasAp Capturing Iron Tetraphenylporphyrin
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, GLYCEROL, ...
著者Shisaka, Y, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
7EMR
DownloadVisualize
BU of 7emr by Molmil
Crystal Structure of HasAp Capturing Cobalt Tetraphenylporphyrin
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Co-5,10,15,20-Tetraphenylporphyrin, ...
著者Shisaka, Y, Sakakibara, E, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
7EMU
DownloadVisualize
BU of 7emu by Molmil
Crystal Structure of the HasAp V37G Mutant Capturing Manganese Tetraphenylporphyrin
分子名称: GLYCEROL, Heme acquisition protein HasAp, Mn-5,10,15,20-Tetraphenylporphyrin
著者Shisaka, Y, Sakakibara, E, Sugimoto, H, Shoji, O.
登録日2021-04-14
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Tetraphenylporphyrin Enters the Ring: First Example of a Complex between Highly Bulky Porphyrins and a Protein.
Chembiochem, 23, 2022
3VYM
DownloadVisualize
BU of 3vym by Molmil
Dimeric Hydrogenobacter thermophilus cytochrome c552
分子名称: Cytochrome c-552, HEME C
著者Hayashi, Y, Nagao, S, Osuka, H, Komori, H, Higuchi, Y, Hirota, S.
登録日2012-09-28
公開日2012-11-07
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Domain Swapping of the Heme and N-Terminal alpha-Helix in Hydrogenobacter thermophilus Cytochrome c(552) Dimer
Biochemistry, 51, 2012
5YBQ
DownloadVisualize
BU of 5ybq by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S in complex with preaustinoid A2
分子名称: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA, ...
著者Nakashima, Y, Senda, M.
登録日2017-09-05
公開日2018-01-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBM
DownloadVisualize
BU of 5ybm by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA
分子名称: PrhA
著者Nakashima, Y, Senda, M.
登録日2017-09-05
公開日2018-01-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.115 Å)
主引用文献Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBR
DownloadVisualize
BU of 5ybr by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S in complex with preaustinoid A3
分子名称: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA, ...
著者Nakashima, Y, Senda, M.
登録日2017-09-05
公開日2018-01-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.261 Å)
主引用文献Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBO
DownloadVisualize
BU of 5ybo by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA in complex with preaustinoid A1
分子名称: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA, ...
著者Nakashima, Y, Senda, M.
登録日2017-09-05
公開日2018-01-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.204 Å)
主引用文献Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBL
DownloadVisualize
BU of 5ybl by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AusE
分子名称: 2-OXOGLUTARIC ACID, MANGANESE (II) ION, Multifunctional dioxygenase ausE
著者Nakashima, Y, Senda, M.
登録日2017-09-05
公開日2018-01-24
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.108 Å)
主引用文献Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBT
DownloadVisualize
BU of 5ybt by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S/M241V in complex with berkeleyone A
分子名称: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA, ...
著者Nakashima, Y, Senda, M.
登録日2017-09-05
公開日2018-01-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
5YBS
DownloadVisualize
BU of 5ybs by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S in complex with berkeleyone A
分子名称: 2-OXOGLUTARIC ACID, FE (III) ION, PrhA, ...
著者Nakashima, Y, Senda, M.
登録日2017-09-05
公開日2018-01-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018
3VQF
DownloadVisualize
BU of 3vqf by Molmil
Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein
分子名称: E3 ubiquitin-protein ligase LNX
著者Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H.
登録日2012-03-22
公開日2013-03-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.199 Å)
主引用文献Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase
To be Published
3VMI
DownloadVisualize
BU of 3vmi by Molmil
Carbazole- and oxygen-bound complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
分子名称: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Ashikawa, Y, Nojiri, H.
登録日2011-12-12
公開日2012-08-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insight into the substrate- and dioxygenbinding manner in the catalytic cycle of rieske nonheme iron oxygenase system, carbazole 1,9adioxygenase
Bmc Struct.Biol., 12, 2012
3VQG
DownloadVisualize
BU of 3vqg by Molmil
Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein
分子名称: C-terminal peptide from Immunoglobulin superfamily member 5, E3 ubiquitin-protein ligase LNX, SULFATE ION
著者Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H.
登録日2012-03-23
公開日2013-03-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase
To be Published
3WUQ
DownloadVisualize
BU of 3wuq by Molmil
Structure of the entire stalk region of the dynein motor domain
分子名称: Cytoplasmic dynein 1 heavy chain 1
著者Nishikawa, Y, Oyama, T, Kamiya, N, Kon, T, Toyoshima, Y.Y, Nakamura, H, Kurisu, G.
登録日2014-05-01
公開日2014-08-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the entire stalk region of the Dynein motor domain
J.Mol.Biol., 426, 2014
3VMG
DownloadVisualize
BU of 3vmg by Molmil
Reduced carbazole-bound complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
分子名称: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Ashikawa, Y, Nojiri, H.
登録日2011-12-12
公開日2012-08-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural insight into the substrate- and dioxygenbinding manner in the catalytic cycle of rieske nonheme iron oxygenase system, carbazole 1,9adioxygenase
Bmc Struct.Biol., 12, 2012
3VMH
DownloadVisualize
BU of 3vmh by Molmil
Oxygen-bound complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
分子名称: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin component of carbazole, ...
著者Ashikawa, Y, Nojiri, H.
登録日2011-12-12
公開日2012-08-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural insight into the substrate- and dioxygenbinding manner in the catalytic cycle of rieske nonheme iron oxygenase system, carbazole 1,9adioxygenase
Bmc Struct.Biol., 12, 2012
5XSW
DownloadVisualize
BU of 5xsw by Molmil
Crystal structure of an archaeal chitinase in the substrate-complex form (P63)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, Chitinase, GLYCEROL, ...
著者Nishitani, Y, Miki, K.
登録日2017-06-15
公開日2018-05-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structures of an archaeal chitinase ChiD and its ligand complexes.
Glycobiology, 28, 2018
5XSV
DownloadVisualize
BU of 5xsv by Molmil
Crystal structure of an archaeal chitinase in the ligand-free form
分子名称: COBALT (II) ION, Chitinase, SULFATE ION
著者Nishitani, Y, Miki, K.
登録日2017-06-15
公開日2018-05-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.723 Å)
主引用文献Crystal structures of an archaeal chitinase ChiD and its ligand complexes.
Glycobiology, 28, 2018
5XSX
DownloadVisualize
BU of 5xsx by Molmil
Crystal structure of an archaeal chitinase in the substrate-complex form (P212121)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase, GLYCEROL, ...
著者Nishitani, Y, Miki, K.
登録日2017-06-15
公開日2018-05-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.642 Å)
主引用文献Crystal structures of an archaeal chitinase ChiD and its ligand complexes.
Glycobiology, 28, 2018
2EYZ
DownloadVisualize
BU of 2eyz by Molmil
CT10-Regulated Kinase isoform II
分子名称: v-crk sarcoma virus CT10 oncogene homolog isoform a
著者Kobashigawa, Y, Tanaka, S, Inagaki, F.
登録日2005-11-10
公開日2006-11-10
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Structural basis for the transforming activity of human cancer-related signaling adaptor protein CRK.
Nat.Struct.Mol.Biol., 14, 2007
2EYX
DownloadVisualize
BU of 2eyx by Molmil
C-Terminal SH3 domain of CT10-Regulated Kinase
分子名称: v-crk sarcoma virus CT10 oncogene homolog isoform a
著者Kobashigawa, Y, Tanaka, S, Inagaki, F.
登録日2005-11-10
公開日2006-11-10
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Structural basis for the transforming activity of human cancer-related signaling adaptor protein CRK.
Nat.Struct.Mol.Biol., 14, 2007

219515

件を2024-05-08に公開中

PDB statisticsPDBj update infoContact PDBjnumon