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4LXC
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BU of 4lxc by Molmil
The antimicrobial peptidase lysostaphin from Staphylococcus simulans
分子名称: Lysostaphin, SULFATE ION, ZINC ION
著者Sabala, I, Jagielska, E, Bardelang, P.T, Czapinska, H, Dahms, S.O, Sharpe, J.A, James, R, Than, M.E, Thomas, N.R, Bochtler, M.
登録日2013-07-29
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of the antimicrobial peptidase lysostaphin from Staphylococcus simulans.
Febs J., 281, 2014
4QPB
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Catalytic domain of the antimicrobial peptidase lysostaphin from Staphylococcus simulans crystallized in the absence of phosphate
分子名称: 1,2-ETHANEDIOL, Lysostaphin, ZINC ION
著者Sabala, I, Jagielska, E, Bardelang, P.T, Czapinska, H, Dahms, S.O, Sharpe, J.A, James, R, Than, M.E, Thomas, N.R, Bochtler, M.
登録日2014-06-22
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of the antimicrobial peptidase lysostaphin from Staphylococcus simulans.
Febs J., 281, 2014
4QP5
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Catalytic domain of the antimicrobial peptidase lysostaphin from Staphylococcus simulans crystallized in the presence of phosphate
分子名称: GLYCEROL, Lysostaphin, PHOSPHATE ION, ...
著者Sabala, I, Jagielska, E, Bardelang, P.T, Czapinska, H, Dahms, S.O, Sharpe, J.A, James, R, Than, M.E, Thomas, N.R, Bochtler, M.
登録日2014-06-22
公開日2014-07-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Crystal structure of the antimicrobial peptidase lysostaphin from Staphylococcus simulans.
Febs J., 281, 2014
1TZP
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BU of 1tzp by Molmil
MEPA, inactive form without ZN in P21
分子名称: 1,4-BUTANEDIOL, Penicillin-insensitive murein endopeptidase, SULFATE ION
著者Marcyjaniak, M, Odintsov, S.G, Sabala, I, Bochtler, M.
登録日2004-07-11
公開日2004-09-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Peptidoglycan amidase MepA is a LAS metallopeptidase
J.Biol.Chem., 279, 2004
5LEO
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BU of 5leo by Molmil
Complex structure of lysostaphin SH3b domain with peptidoglycan fragment
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLY-GLY-GLY-GLY-GLY, Lysostaphin, ...
著者Jagielska, E, Nowak, E, Bochtler, M, Sabala, I.
登録日2016-06-30
公開日2017-07-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Complex structure of lysostaphin SH3doamin with peptidoglycan fragment
To Be Published
1ZJC
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Aminopeptidase S from S. aureus
分子名称: COBALT (II) ION, aminopeptidase ampS
著者Odintsov, S.G, Sabala, I, Bourenkov, G, Rybin, V, Bochtler, M.
登録日2005-04-28
公開日2005-06-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Staphylococcus aureus Aminopeptidase S Is a Founding Member of a New Peptidase Clan.
J.Biol.Chem., 280, 2005
4ZYB
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BU of 4zyb by Molmil
High resolution structure of M23 peptidase LytM with substrate analogue
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
著者Grabowska, M, Jagielska, E, Czapinska, H, Bochtler, M, Sabala, I.
登録日2015-05-21
公開日2015-10-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献High resolution structure of an M23 peptidase with a substrate analogue.
Sci Rep, 5, 2015
7BNH
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BU of 7bnh by Molmil
Complex structure at atomic resolution of SH3b domain with benzoic acid
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, BENZOIC ACID, GLYCEROL, ...
著者Malecki, P.H, Sabala, I.
登録日2021-01-22
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (0.84 Å)
主引用文献Complex structure of SH3b domain with benzoic acid
To Be Published
7BNI
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Complex structure of SH3b domain with 2-hydroxybenzoic acid
分子名称: 2-HYDROXYBENZOIC ACID, GLYCEROL, Lysostaphin, ...
著者Malecki, P.H, Sabala, I.
登録日2021-01-22
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Complex structure of SH3b domain with 2-hydroxybenzoic acid
To Be Published
7BNG
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Complex structure of SH3b domain with L-canavanine
分子名称: GLYCEROL, L-CANAVANINE, Lysostaphin, ...
著者Malecki, P.H, Sabala, I.
登録日2021-01-22
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Complex structure of SH3b domain with L-canavanine
To Be Published
1U10
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BU of 1u10 by Molmil
MEPA, active form with ZN in P1
分子名称: Penicillin-insensitive murein endopeptidase, SULFATE ION, ZINC ION
著者Marcyjaniak, M, Odintsov, S.G, Sabala, I, Bochtler, M.
登録日2004-07-14
公開日2004-09-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Peptidoglycan amidase MepA is a LAS metallopeptidase
J.Biol.Chem., 279, 2004
2AYI
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BU of 2ayi by Molmil
Wild-type AmpT from Thermus thermophilus
分子名称: Aminopeptidase T, ZINC ION
著者Odintsov, S.G, Sabala, I, Bourenkov, G, Rybin, V, Bochtler, M.
登録日2005-09-07
公開日2005-11-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Substrate Access to the Active Sites in Aminopeptidase T, a Representative of a New Metallopeptidase Clan.
J.Mol.Biol., 354, 2005
6SMK
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BU of 6smk by Molmil
Crystal structure of catalytic domain A109H mutant of prophage-encoded M23 protein EnpA from Enterococcus faecalis.
分子名称: Peptidase_M23 domain-containing protein, ZINC ION
著者Malecki, P.H, Mitkowski, P, Czapinska, H, Sabala, I.
登録日2019-08-22
公開日2020-09-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.997 Å)
主引用文献Structural Characterization of EnpA D,L-Endopeptidase from Enterococcus faecalis Prophage Provides Insights into Substrate Specificity of M23 Peptidases.
Int J Mol Sci, 22, 2021
1QWY
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BU of 1qwy by Molmil
Latent LytM at 1.3 A resolution
分子名称: ZINC ION, peptidoglycan hydrolase
著者Odintsov, S.G, Sabala, I, Marcyjaniak, M, Bochtler, M.
登録日2003-09-03
公開日2004-01-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Latent LytM at 1.3A resolution.
J.Mol.Biol., 335, 2004
4OUN
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BU of 4oun by Molmil
Crystal Structure of Mini-ribonuclease 3 from Bacillus subtilis
分子名称: Mini-ribonuclease 3
著者Chojnowski, G, Czarnecka, J, Nowak, E, Pianka, D, Glow, D, Sabala, I, Skowronek, K, Nowotny, M, Bujnicki, J.M.
登録日2014-02-18
公開日2015-02-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Sequence-specific cleavage of dsRNA by Mini-III RNase
Nucleic Acids Res., 43, 2015
6RK4
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BU of 6rk4 by Molmil
Lysostaphin SH3b P4-G5 complex, synchrotron dataset
分子名称: (2~{R})-2-[[(2~{S})-2-[[(4~{R})-5-azanyl-4-[[(2~{S})-2-azanylpropanoyl]amino]-5-oxidanylidene-pentanoyl]amino]-6-[2-[2-[2-[2-(2-azanylethanoylamino)ethanoylamino]ethanoylamino]ethanoylamino]ethanoylamino]hexanoyl]amino]propanoic acid, 1,2-ETHANEDIOL, Lysostaphin
著者Walters-Morgan, H, Lovering, A.L.
登録日2019-04-30
公開日2019-10-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Two-site recognition of Staphylococcus aureus peptidoglycan by lysostaphin SH3b.
Nat.Chem.Biol., 16, 2020
6RJE
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BU of 6rje by Molmil
Lysostaphin SH3b P4-G5 complex, homesource dataset
分子名称: (2~{R})-2-[[(2~{S})-2-[[(4~{R})-5-azanyl-4-[[(2~{S})-2-azanylpropanoyl]amino]-5-oxidanylidene-pentanoyl]amino]-6-[2-[2-[2-[2-(2-azanylethanoylamino)ethanoylamino]ethanoylamino]ethanoylamino]ethanoylamino]hexanoyl]amino]propanoic acid, Lysostaphin
著者Walters-Morgan, H, Lovering, A.L.
登録日2019-04-26
公開日2019-10-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Two-site recognition of Staphylococcus aureus peptidoglycan by lysostaphin SH3b.
Nat.Chem.Biol., 16, 2020
2B0P
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truncated S. aureus LytM, P212121 crystal form
分子名称: ACETATE ION, CACODYLATE ION, Glycyl-glycine endopeptidase lytM, ...
著者Firczuk, M, Mucha, A, Bochtler, M.
登録日2005-09-14
公開日2006-01-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structures of active LytM.
J.Mol.Biol., 354, 2005
2B13
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Truncated S. aureus LytM, P41 crystal form
分子名称: Glycyl-glycine endopeptidase lytM, L(+)-TARTARIC ACID, ZINC ION
著者Firczuk, M, Mucha, A, Bochtler, M.
登録日2005-09-15
公開日2006-01-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structures of active LytM.
J.Mol.Biol., 354, 2005

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