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1F85
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BU of 1f85 by Molmil
SOLUTION STRUCTURE OF HCV IRES RNA DOMAIN IIIE
分子名称: HCV-1B IRES RNA DOMAIN IIIE
著者Lukavsky, P.J, Otto, G.A, Lancaster, A.M, Sarnow, P, Puglisi, J.D.
登録日2000-06-28
公開日2000-11-17
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Structures of two RNA domains essential for hepatitis C virus internal ribosome entry site function.
Nat.Struct.Biol., 7, 2000
1F84
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BU of 1f84 by Molmil
SOLUTION STRUCTURE OF HCV IRES RNA DOMAIN IIID
分子名称: HCV-1B IRES RNA DOMAIN IIID
著者Lukavsky, P.J, Otto, G.A, Lancaster, A.M, Sarnow, P, Puglisi, J.D.
登録日2000-06-28
公開日2000-11-17
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Structures of two RNA domains essential for hepatitis C virus internal ribosome entry site function.
Nat.Struct.Biol., 7, 2000
1FYP
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BU of 1fyp by Molmil
EUKARYOTIC DECODING REGION A-SITE RNA-PAROMOMYCIN COMPLEX
分子名称: FRAGMENT OF 18S RIBOSOMAL RNA, PAROMOMYCIN
著者Lynch, S.R, Puglisi, J.D.
登録日2000-10-02
公開日2001-03-14
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Structural origins of aminoglycoside specificity for prokaryotic ribosomes.
J.Mol.Biol., 306, 2001
1FYO
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BU of 1fyo by Molmil
EUKARYOTIC DECODING REGION A-SITE RNA
分子名称: FRAGMENT OF 18S RIBOSOMAL RNA
著者Lynch, S.R, Puglisi, J.D.
登録日2000-10-02
公開日2001-03-14
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Structure of a eukaryotic decoding region A-site RNA.
J.Mol.Biol., 306, 2001
1I3X
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BU of 1i3x by Molmil
SOLUTION STRUCTURE OF THE A LOOP OF 23S RIBOSOMAL RNA
分子名称: 5'-R(*GP*GP*CP*UP*GP*GP*CP*UP*GP*UP*UP*CP*GP*CP*CP*AP*GP*CP*C)-3'
著者Blanchard, S.C, Puglisi, J.D.
登録日2001-02-17
公開日2001-04-04
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of the A loop of 23S ribosomal RNA.
Proc.Natl.Acad.Sci.USA, 98, 2001
1A3M
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BU of 1a3m by Molmil
PAROMOMYCIN BINDING INDUCES A LOCAL CONFORMATIONAL CHANGE IN THE A SITE OF 16S RRNA, NMR, 20 STRUCTURES
分子名称: 16S RRNA (5'-R(*GP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*UP*UP*C)-3'), 16S RRNA (5'-R(*GP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*CP*C)-3')
著者Fourmy, D, Yoshizawa, S, Puglisi, J.D.
登録日1998-01-22
公開日1998-04-29
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Paromomycin binding induces a local conformational change in the A-site of 16 S rRNA.
J.Mol.Biol., 277, 1998
1BYJ
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BU of 1byj by Molmil
GENTAMICIN C1A A-SITE COMPLEX
分子名称: 2,6-diamino-2,3,4,6-tetradeoxy-alpha-D-erythro-hexopyranose, 3,5-DIAMINO-CYCLOHEXANOL, 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranose, ...
著者Yoshizawa, S, Fourmy, D, Puglisi, J.D.
登録日1998-10-16
公開日1999-10-29
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structural origins of gentamicin antibiotic action.
EMBO J., 17, 1998
1OR5
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BU of 1or5 by Molmil
SOLUTION STRUCTURE OF THE HOLO-FORM OF THE FRENOLICIN ACYL CARRIER PROTEIN, MINIMIZED MEAN STRUCTURE
分子名称: acyl carrier protein
著者Li, Q, Khosla, C, Puglisi, J, Liu, C.W.
登録日2003-03-11
公開日2003-07-01
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution Structure and Backbone Dynamics of the Holo Form of the Frenolicin Acyl Carrier Protein
Biochemistry, 42, 2003
5WNP
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Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者DeMirci, H.
登録日2017-08-01
公開日2018-02-21
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
5WNV
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Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: (1R,2S,3S,4R,6R)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-alpha-L-altropyranosyl)-beta-L-arabinofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-allopyranoside, 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, ...
著者DeMirci, H.
登録日2017-08-01
公開日2018-02-21
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
5WNQ
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BU of 5wnq by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者DeMirci, H.
登録日2017-08-01
公開日2018-02-21
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
5WNU
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BU of 5wnu by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: (1R,2S,3S,4R,6R)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-alpha-L-altropyranosyl)-beta-L-arabinofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-allopyranoside, 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, ...
著者DeMirci, H.
登録日2017-08-01
公開日2018-02-21
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
8P09
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BU of 8p09 by Molmil
48S late-stage initiation complex with non methylated mRNA
分子名称: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
著者Guca, E, Lima, L.H.F, Boissier, F, Hashem, Y.
登録日2023-05-09
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献N 6 -methyladenosine in 5' UTR does not promote translation initiation.
Mol.Cell, 84, 2024
8P03
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BU of 8p03 by Molmil
48S late-stage initiation complex with m6A mRNA
分子名称: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
著者Guca, E, Lima, L.H.F, Boissier, F, Hashem, Y.
登録日2023-05-09
公開日2024-03-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献N 6 -methyladenosine in 5' UTR does not promote translation initiation.
Mol.Cell, 84, 2024
5WNS
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BU of 5wns by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者DeMirci, H.
登録日2017-08-01
公開日2018-02-21
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
5WNR
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BU of 5wnr by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者DeMirci, H.
登録日2017-08-01
公開日2018-02-21
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
5WNT
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BU of 5wnt by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称: (1R,2S,3S,4R,6R)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-alpha-L-altropyranosyl)-beta-L-arabinofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-allopyranoside, 16S Ribosomal RNA rRNA, MAGNESIUM ION, ...
著者DeMirci, H.
登録日2017-08-01
公開日2018-02-21
最終更新日2020-10-21
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation.
Nat. Struct. Mol. Biol., 25, 2018
1AKX
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BU of 1akx by Molmil
HIV-2 TRANS ACTIVATING REGION RNA COMPLEX WITH ARGININAMIDE, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: ARGININE, TAR RNA
著者Brodsky, A.S, Williamson, J.R.
登録日1997-05-27
公開日1997-11-19
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Solution structure of the HIV-2 TAR-argininamide complex.
J.Mol.Biol., 267, 1997
1AJU
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BU of 1aju by Molmil
HIV-2 TAR-ARGININAMIDE COMPLEX, NMR, 20 STRUCTURES
分子名称: ARGININE, TAR RNA
著者Brodsky, A.S, Williamson, J.R.
登録日1997-05-10
公開日1997-12-17
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Solution structure of the HIV-2 TAR-argininamide complex.
J.Mol.Biol., 267, 1997
1ARJ
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ARG-BOUND TAR RNA, NMR
分子名称: ARGININE, TAR RNA
著者Aboul-Ela, F, Varani, G, Karn, J.
登録日1995-08-30
公開日1996-11-08
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献The structure of the human immunodeficiency virus type-1 TAR RNA reveals principles of RNA recognition by Tat protein.
J.Mol.Biol., 253, 1995
1ZBN
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BU of 1zbn by Molmil
Solution structure of BIV TAR hairpin complexed to JDV Tat arginine-rich motif
分子名称: BIV mRNA, JDV tat protein
著者Calabro, V, Daugherty, M.D, Frankel, A.D.
登録日2005-04-08
公開日2005-04-19
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献A single intermolecular contact mediates intramolecular stabilization of both RNA and protein.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1ANR
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CIS-ACTING RNA REGULATORY ELEMENT (HIV-1 TAR), NMR, 20 STRUCTURES
分子名称: RNA REGULATORY ELEMENT TAR
著者Aboul-Ela, F, Varani, G, Karn, J.
登録日1996-07-06
公開日1997-01-11
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge.
Nucleic Acids Res., 24, 1996
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