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4JIV
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BU of 4jiv by Molmil
VCA0105 PAAR-repeat protein from Vibrio cholerae in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
分子名称: 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ...
著者Buth, S.A, Leiman, P.G, Shneider, M.M.
登録日2013-03-07
公開日2013-08-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
4JK5
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BU of 4jk5 by Molmil
Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Ser)
分子名称: 1,3,5-tris(bromomethyl)benzene, CHLORIDE ION, HEXAETHYLENE GLYCOL, ...
著者Buth, S.A, Leiman, P.G, Chen, S, Heinis, C.
登録日2013-03-09
公開日2013-07-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Improving binding affinity and stability of Peptide ligands by substituting glycines with d-amino acids.
Chembiochem, 14, 2013
4JK6
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BU of 4jk6 by Molmil
Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Aba)
分子名称: 1,3,5-tris(bromomethyl)benzene, CHLORIDE ION, HEXAETHYLENE GLYCOL, ...
著者Buth, S.A, Leiman, P.G, Chen, S, Heinis, C.
登録日2013-03-09
公開日2013-07-17
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Improving binding affinity and stability of Peptide ligands by substituting glycines with d-amino acids.
Chembiochem, 14, 2013
4KU0
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BU of 4ku0 by Molmil
Enterobacteria phage T4 gp5.4 PAAR repeat protein in complex with T4 gp5 beta-helix fragment
分子名称: 1,2-ETHANEDIOL, 9-OCTADECENOIC ACID, FE (III) ION, ...
著者Buth, S.A, Leiman, P.G, Shneider, M.M.
登録日2013-05-21
公開日2014-05-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Crystall structute of the business end of the T4 cell-puncturing device
To be Published
4MTK
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BU of 4mtk by Molmil
Crystal structure of PA0091 VgrG1, the central spike of the Type VI Secretion System
分子名称: SULFATE ION, TRIS(HYDROXYETHYL)AMINOMETHANE, VgrG1
著者Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2013-09-19
公開日2014-10-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.322 Å)
主引用文献The conserved architecture of the T6SS central spike complex
To be Published
4MTM
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BU of 4mtm by Molmil
Crystal structure of the tail fiber gp53 from Acinetobacter baumannii bacteriophage AP22
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, GLYCEROL, ...
著者Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2013-09-19
公開日2014-10-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.368 Å)
主引用文献Crystal Structure of the putative tail fiber protein gp53 from the Acinetobacter baumannii bacteriophage AP22
Biorxiv, 2019
6C72
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BU of 6c72 by Molmil
Crystal structure of a tailspike protein gp49 from Acinetobacter baumannii bacteriophage Fri1, a capsular polysaccharide depolymerase
分子名称: Particle-associated glycoside hydrolase, ZINC ION
著者Buth, S.A, Garcon, A, Popova, A.V, Shneider, M.M, Leiman, P.G.
登録日2018-01-19
公開日2019-01-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献Exopolysaccharide degrading enzymes - specificity determinants of Acinetobacter baumannii phages
To Be Published
6CL5
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BU of 6cl5 by Molmil
Structure of P. aeruginosa R1 pyocin fiber PALES_06171 comprising C-terminal residues 323-701
分子名称: FE (III) ION, MAGNESIUM ION, SODIUM ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2018-03-01
公開日2018-06-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.324 Å)
主引用文献Structure and Analysis of R1 and R2 Pyocin Receptor-Binding Fibers.
Viruses, 10, 2018
1K28
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BU of 1k28 by Molmil
The Structure of the Bacteriophage T4 Cell-Puncturing Device
分子名称: BASEPLATE STRUCTURAL PROTEIN GP27, PHOSPHATE ION, POTASSIUM ION, ...
著者Kanamaru, S, Leiman, P.G, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Arisaka, F, Rossmann, M.G.
登録日2001-09-26
公開日2002-02-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the cell-puncturing device of bacteriophage T4.
Nature, 415, 2002
6CL6
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BU of 6cl6 by Molmil
Structure of P. aeruginosa R2 pyocin fiber PA0620 comprising C-terminal residues 323-691
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, FE (III) ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2018-03-01
公開日2018-06-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Structure and Analysis of R1 and R2 Pyocin Receptor-Binding Fibers.
Viruses, 10, 2018
6E1R
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BU of 6e1r by Molmil
Crystal structure of the Acinetobacter phage vB_ApiP_P1 tailspike protein
分子名称: CHLORIDE ION, SODIUM ION, Tailspike protein
著者Plattner, M, Shneider, M.M, Oliveira, H, Azeredo, J, Leiman, P.G.
登録日2018-07-10
公開日2019-07-17
実験手法X-RAY DIFFRACTION (2.693 Å)
主引用文献Crystal structure of the Acinetobacter phage vB_ApiP_P1 tailspike protein
To Be Published
6E0W
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BU of 6e0w by Molmil
Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid
分子名称: 1,2-ETHANEDIOL, 1,5-anhydro-4,6-O-[(1R)-1-carboxyethylidene]-D-galactitol, Bacteriophage Phi92 gp150, ...
著者Plattner, M, Browning, C, Gerardy-Schahn, R, Shneider, M.M, Leiman, P.G, Schwarzer, D.
登録日2018-07-07
公開日2019-07-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid
To Be Published
6EU4
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BU of 6eu4 by Molmil
Structure of Acinetobacter phage vb_AbaP_AS12 gp42 tailspike
分子名称: Tail spike protein, ZINC ION
著者Taylor, N.M.I, Shneider, M.M, Leiman, P.G.
登録日2017-10-27
公開日2018-11-07
実験手法X-RAY DIFFRACTION (1.794 Å)
主引用文献Structure of Acinetobacter phage vb_AbaP_AS12 gp42 tailspike
To Be Published
4OSD
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BU of 4osd by Molmil
Dimer of a C-terminal fragment of phage T4 gp5 beta-helix
分子名称: 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ...
著者Buth, S.A, Leiman, P.G, Shneider, M.M.
登録日2014-02-12
公開日2015-02-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structure and Biophysical Properties of a Triple-Stranded Beta-Helix Comprising the Central Spike of Bacteriophage T4.
Viruses, 7, 2015
4QNL
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BU of 4qnl by Molmil
Crystal structure of tail fiber protein gp63.1 from E. coli phage G7C
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Riccio, C, Browning, C, Prokhorov, N, Letarov, A, Leiman, P.G.
登録日2014-06-18
公開日2015-06-24
最終更新日2017-12-20
実験手法X-RAY DIFFRACTION (2.411 Å)
主引用文献Function of bacteriophage G7C esterase tailspike in host cell adsorption.
Mol. Microbiol., 105, 2017
4RU4
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BU of 4ru4 by Molmil
Crystal structure of the tailspike protein gp49 from Pseudomonas phage LKA1
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, SODIUM ION, ...
著者Browning, C, Shneider, M.M, Leiman, P.G.
登録日2014-11-18
公開日2015-11-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence.
Sci Rep, 7, 2017
4RU5
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BU of 4ru5 by Molmil
Crystal Structure of the Pseudomonas phage phi297 tailspike gp61
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Browning, C, Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2014-11-18
公開日2015-11-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence.
Sci Rep, 7, 2017
4S36
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BU of 4s36 by Molmil
Crystal structure of the C-terminal domain of R2 pyocin membrane-piercing spike
分子名称: FE (III) ION, Phage baseplate protein
著者Browning, C.B, Leiman, P.G, Shneider, M.M.
登録日2015-01-26
公開日2016-01-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Crystal structure of the C-terminal domain of R2 pyocin membrane-piercing spike
To be Published
4RU3
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BU of 4ru3 by Molmil
Crystal structure of the cell puncturing protein Orf41 from Pseudomonas phage SN
分子名称: CALCIUM ION, FE (III) ION, GLYCEROL, ...
著者Browning, C, Shneider, M.M, Leiman, P.G.
登録日2014-11-18
公開日2015-11-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.172 Å)
主引用文献Crystal structure of the cell puncturing protein Orf41 from Pseudomonas phage SN
To be Published
4S37
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BU of 4s37 by Molmil
Crystal structure of R2 pyocin membrane-piercing spike
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Browning, C.B, Leiman, P.G, Shneider, M.M.
登録日2015-01-26
公開日2016-01-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of R2 pyocin membrane-piercing spike
To be Published
1PDI
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BU of 1pdi by Molmil
Fitting of the C-terminal part of the short tail fibers into the cryo-EM reconstruction of T4 baseplate
分子名称: Short tail fiber protein
著者Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2003-05-19
公開日2003-09-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Three-dimensional structure of bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
1PDP
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BU of 1pdp by Molmil
Fitting of gp9 structure into the bacteriophage T4 baseplate cryoEM reconstruction
分子名称: Baseplate structural protein Gp9
著者Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2003-05-19
公開日2003-09-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
3FO8
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BU of 3fo8 by Molmil
Crystal structure of the bacteriophage T4 tail sheath protein, protease resistant fragment gp18PR
分子名称: ACETATE ION, Tail sheath protein Gp18
著者Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2008-12-29
公開日2009-03-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009
3FOI
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BU of 3foi by Molmil
Fitting of gp18M crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 contracted tail
分子名称: Tail sheath protein Gp18
著者Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2008-12-30
公開日2009-03-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009
3FOA
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BU of 3foa by Molmil
Crystal structure of the bacteriophage T4 tail sheath protein, deletion mutant gp18M
分子名称: Tail sheath protein Gp18
著者Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2008-12-29
公開日2009-03-10
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009

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