Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2VLA
DownloadVisualize
BU of 2vla by Molmil
Crystal structure of restriction endonuclease BpuJI recognition domain in complex with cognate DNA
分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 5'-D(*GP*GP*TP*AP*CP*CP*CP*GP*TP*GP *GP*A)-3', 5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*TP*AP *CP*C)-3', ...
著者Sukackaite, R, Grazulis, S, Bochtler, M, Siksnys, V.
登録日2008-01-11
公開日2008-05-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The Recognition Domain of the Bpuji Restriction Endonuclease in Complex with Cognate DNA at 1.3-A Resolution.
J.Mol.Biol., 378, 2008
3PRH
DownloadVisualize
BU of 3prh by Molmil
tryptophanyl-tRNA synthetase Val144Pro mutant from B. subtilis
分子名称: Tryptophanyl-tRNA synthetase
著者Antonczak, A.K, Simova, Z, Yonemoto, I, Bochtler, M, Piasecka, A, Czapinska, H, Brancale, A, Tippmann, E.M.
登録日2010-11-29
公開日2011-01-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Importance of single molecular determinants in the fidelity of expanded genetic codes.
Proc.Natl.Acad.Sci.USA, 108, 2011
2B0P
DownloadVisualize
BU of 2b0p by Molmil
truncated S. aureus LytM, P212121 crystal form
分子名称: ACETATE ION, CACODYLATE ION, Glycyl-glycine endopeptidase lytM, ...
著者Firczuk, M, Mucha, A, Bochtler, M.
登録日2005-09-14
公開日2006-01-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structures of active LytM.
J.Mol.Biol., 354, 2005
2B13
DownloadVisualize
BU of 2b13 by Molmil
Truncated S. aureus LytM, P41 crystal form
分子名称: Glycyl-glycine endopeptidase lytM, L(+)-TARTARIC ACID, ZINC ION
著者Firczuk, M, Mucha, A, Bochtler, M.
登録日2005-09-15
公開日2006-01-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structures of active LytM.
J.Mol.Biol., 354, 2005
1X9Y
DownloadVisualize
BU of 1x9y by Molmil
The prostaphopain B structure
分子名称: cysteine proteinase
著者Filipek, R, Szczepanowski, R, Sabat, A, Potempa, J, Bochtler, M.
登録日2004-08-24
公開日2004-11-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Prostaphopain B structure: a comparison of proregion-mediated and staphostatin-mediated protease inhibition.
Biochemistry, 43, 2004
2B44
DownloadVisualize
BU of 2b44 by Molmil
Truncated S. aureus LytM, P 32 2 1 crystal form
分子名称: Glycyl-glycine endopeptidase lytM, PHOSPHATE ION, ZINC ION
著者Firczuk, M, Mucha, A, Bochtler, M.
登録日2005-09-22
公開日2006-01-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Crystal structures of active LytM.
J.Mol.Biol., 354, 2005
1YR3
DownloadVisualize
BU of 1yr3 by Molmil
Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene
分子名称: SULFATE ION, XANTHINE, Xanthosine phosphorylase
著者Dandanell, G, Szczepanowski, R.H, Kierdaszuk, B, Shugar, D, Bochtler, M.
登録日2005-02-03
公開日2005-04-19
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene
J.Mol.Biol., 348, 2005
1YQU
DownloadVisualize
BU of 1yqu by Molmil
Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene
分子名称: GUANINE, PHOSPHATE ION, Xanthosine phosphorylase
著者Dandanell, G, Szczepanowski, R.H, Kierdaszuk, B, Shugar, D, Bochtler, M.
登録日2005-02-02
公開日2005-04-19
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene
J.Mol.Biol., 348, 2005
1YQQ
DownloadVisualize
BU of 1yqq by Molmil
Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene
分子名称: GUANINE, PHOSPHATE ION, Xanthosine phosphorylase
著者Dandanell, G, Szczepanowski, R.H, Kierdaszuk, B, Shugar, D, Bochtler, M.
登録日2005-02-02
公開日2005-04-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Escherichia coli Purine Nucleoside Phosphorylase II, the Product of the xapA Gene
J.Mol.Biol., 348, 2005
1Z7L
DownloadVisualize
BU of 1z7l by Molmil
Crystal structure of fragment of mouse ubiquitin-activating enzyme
分子名称: HEXATANTALUM DODECABROMIDE, Ubiquitin-activating enzyme E1 1
著者Szczepanowski, R.H, Filipek, R, Bochtler, M.
登録日2005-03-25
公開日2005-04-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of a fragment of mouse ubiquitin-activating enzyme.
J.Biol.Chem., 280, 2005
1ZJC
DownloadVisualize
BU of 1zjc by Molmil
Aminopeptidase S from S. aureus
分子名称: COBALT (II) ION, aminopeptidase ampS
著者Odintsov, S.G, Sabala, I, Bourenkov, G, Rybin, V, Bochtler, M.
登録日2005-04-28
公開日2005-06-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Staphylococcus aureus Aminopeptidase S Is a Founding Member of a New Peptidase Clan.
J.Biol.Chem., 280, 2005
1ZRS
DownloadVisualize
BU of 1zrs by Molmil
wild-type LD-carboxypeptidase
分子名称: hypothetical protein
著者Korza, H.J, Bochtler, M.
登録日2005-05-21
公開日2005-09-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Pseudomonas aeruginosa LD-carboxypeptidase, a serine peptidase with a Ser-His-Glu triad and a nucleophilic elbow.
J.Biol.Chem., 280, 2005
2AYI
DownloadVisualize
BU of 2ayi by Molmil
Wild-type AmpT from Thermus thermophilus
分子名称: Aminopeptidase T, ZINC ION
著者Odintsov, S.G, Sabala, I, Bourenkov, G, Rybin, V, Bochtler, M.
登録日2005-09-07
公開日2005-11-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Substrate Access to the Active Sites in Aminopeptidase T, a Representative of a New Metallopeptidase Clan.
J.Mol.Biol., 354, 2005
2AUN
DownloadVisualize
BU of 2aun by Molmil
Active site His285Ala mutant of LD-carboxypeptidase
分子名称: hypothetical protein
著者Korza, H.J, Bochtler, M.
登録日2005-08-28
公開日2005-09-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Pseudomonas aeruginosa LD-carboxypeptidase, a serine peptidase with a Ser-His-Glu triad and a nucleophilic elbow.
J.Biol.Chem., 280, 2005
2AUM
DownloadVisualize
BU of 2aum by Molmil
Active site Ser115Ala mutant of LD-carboxypeptidase
分子名称: hypothetical protein
著者Korza, H.J, Bochtler, M.
登録日2005-08-28
公開日2005-09-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Pseudomonas aeruginosa LD-carboxypeptidase, a serine peptidase with a Ser-His-Glu triad and a nucleophilic elbow.
J.Biol.Chem., 280, 2005
1M4Y
DownloadVisualize
BU of 1m4y by Molmil
Crystal structure of HslV from Thermotoga maritima
分子名称: ATP-dependent protease hslV, SODIUM ION
著者Song, H.K, Ramachandran, R, Bochtler, M.B, Hartmann, C, Azim, M.K, Huber, R.
登録日2002-07-05
公開日2003-05-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Isolation and characterization of the prokaryotic proteasome homolog HslVU (ClpQY) from Thermotoga maritima and the crystal structure of HslV.
BIOPHYS.CHEM., 100, 2003
8UOO
DownloadVisualize
BU of 8uoo by Molmil
Structure of atypical asparaginase from Rhodospirillum rubrum
分子名称: Asparaginase, CHLORIDE ION, GLYCEROL
著者Lubkowski, J, Wlodawer, A, Zhang, D.
登録日2023-10-20
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases.
Protein Sci., 33, 2024
8UOW
DownloadVisualize
BU of 8uow by Molmil
Structure of atypical asparaginase from Rhodospirillum rubrum (mutant Y21A)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Asparaginase
著者Lubkowski, J, Wlodawer, A, Zhang, D.
登録日2023-10-20
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases.
Protein Sci., 33, 2024
8UP6
DownloadVisualize
BU of 8up6 by Molmil
Structure of atypical asparaginase from Rhodospirillum rubrum (mutant K19A) in complex with L-Asp
分子名称: ASPARTIC ACID, Asparaginase, TETRAETHYLENE GLYCOL
著者Lubkowski, J, Wlodawer, A, Zhang, D.
登録日2023-10-21
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases.
Protein Sci., 33, 2024
8UOR
DownloadVisualize
BU of 8uor by Molmil
Structure of atypical asparaginase from Rhodospirillum rubrum (mutant K19E)
分子名称: 1,2-ETHANEDIOL, Asparaginase, CHLORIDE ION
著者Lubkowski, J, Wlodawer, A, Zhang, D.
登録日2023-10-20
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases.
Protein Sci., 33, 2024
8UP8
DownloadVisualize
BU of 8up8 by Molmil
Structure of atypical asparaginase from Rhodospirillum rubrum (mutant Y21F, complex with L-Asp)
分子名称: ASPARTIC ACID, Asparaginase, CHLORIDE ION, ...
著者Lubkowski, J, Wlodawer, A, Zhang, D.
登録日2023-10-21
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases.
Protein Sci., 33, 2024
8UOU
DownloadVisualize
BU of 8uou by Molmil
Structure of atypical asparaginase from Rhodospirillum rubrum in complex with L-Asp
分子名称: ASPARTIC ACID, Asparaginase, CHLORIDE ION
著者Lubkowski, J, Wlodawer, A, Zhang, D.
登録日2023-10-20
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases.
Protein Sci., 33, 2024
8UPC
DownloadVisualize
BU of 8upc by Molmil
Structure of atypical asparaginase from Rhodospirillum rubrum (mutant K158M)
分子名称: Asparaginase, CHLORIDE ION, GLYCEROL
著者Lubkowski, J, Wlodawer, A, Zhang, D.
登録日2023-10-22
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases.
Protein Sci., 33, 2024
8UP3
DownloadVisualize
BU of 8up3 by Molmil
Structure of atypical asparaginase from Rhodospirillum rubrum (mutant Y21F)
分子名称: 1,2-ETHANEDIOL, ASPARTIC ACID, Asparaginase, ...
著者Lubkowski, J, Wlodawer, A, Zhang, D.
登録日2023-10-20
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases.
Protein Sci., 33, 2024
8UP9
DownloadVisualize
BU of 8up9 by Molmil
Structure of atypical asparaginase from Rhodospirillum rubrum (mutant K19Q)
分子名称: 1,2-ETHANEDIOL, Asparaginase, CHLORIDE ION, ...
著者Lubkowski, J, Wlodawer, A, Zhang, D.
登録日2023-10-21
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases.
Protein Sci., 33, 2024

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon