Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1IDZ
DownloadVisualize
BU of 1idz by Molmil
STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, 20 STRUCTURES
Descriptor: MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3
Authors:Furukawa, K, Oda, M, Nakamura, H.
Deposit date:1996-08-15
Release date:1996-12-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A small engineered protein lacks structural uniqueness by increasing the side-chain conformational entropy.
Proc.Natl.Acad.Sci.USA, 93, 1996
1IDY
DownloadVisualize
BU of 1idy by Molmil
STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3
Authors:Furukawa, K, Oda, M, Nakamura, H.
Deposit date:1996-08-15
Release date:1996-12-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A small engineered protein lacks structural uniqueness by increasing the side-chain conformational entropy.
Proc.Natl.Acad.Sci.USA, 93, 1996
5XFV
DownloadVisualize
BU of 5xfv by Molmil
Crystal structures of FMN-bound form of dihydroorotate dehydrogenase from Trypanosoma brucei
Descriptor: Dihydroorotate dehydrogenase (fumarate), FLAVIN MONONUCLEOTIDE, MALONATE ION
Authors:Kubota, T, Tani, O, Yamaguchi, T, Namatame, I, Sakashita, H, Furukawa, K, Yamasaki, K.
Deposit date:2017-04-11
Release date:2018-04-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structures of FMN-bound and FMN-free forms of dihydroorotate dehydrogenase fromTrypanosoma brucei.
FEBS Open Bio, 8, 2018
5XFW
DownloadVisualize
BU of 5xfw by Molmil
Crystal structures of FMN-free form of dihydroorotate dehydrogenase from Trypanosoma brucei
Descriptor: Dihydroorotate dehydrogenase (fumarate), MALONATE ION
Authors:Kubota, T, Tani, O, Yamaguchi, T, Namatame, I, Sakashita, H, Furukawa, K, Yamasaki, K.
Deposit date:2017-04-11
Release date:2018-04-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of FMN-bound and FMN-free forms of dihydroorotate dehydrogenase fromTrypanosoma brucei.
FEBS Open Bio, 8, 2018
5XDH
DownloadVisualize
BU of 5xdh by Molmil
His/DOPA ligated cytochrome c from an anammox organism KSU-1
Descriptor: ACETATE ION, HEME C, Putative cytochrome c, ...
Authors:Hira, D, Kitamura, R, Nakamura, T, Yamagata, Y, Furukawa, K, Fujii, T.
Deposit date:2017-03-28
Release date:2018-03-28
Last modified:2019-10-02
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Anammox Organism KSU-1 Expresses a Novel His/DOPA Ligated Cytochrome c.
J. Mol. Biol., 430, 2018
4RUM
DownloadVisualize
BU of 4rum by Molmil
Crystal structure of the NiCo transition-metal riboswitch bound to cobalt
Descriptor: COBALT (II) ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Ramesh, A, Winkler, W.C.
Deposit date:2014-11-21
Release date:2015-04-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6426 Å)
Cite:Bacterial riboswitches cooperatively bind Ni(2+) or Co(2+) ions and control expression of heavy metal transporters.
Mol.Cell, 57, 2015
7YDO
DownloadVisualize
BU of 7ydo by Molmil
Crystal structure of Atg44
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, Uncharacterized protein C26A3.14c
Authors:Maruyama, T, Noda, N.N.
Deposit date:2022-07-04
Release date:2023-05-17
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The mitochondrial intermembrane space protein mitofissin drives mitochondrial fission required for mitophagy.
Mol.Cell, 83, 2023
6L7V
DownloadVisualize
BU of 6l7v by Molmil
Crystal structure of Cet1 from Trypanosoma cruzi in complex with tripolyphosphate, manganese and iodide ions.
Descriptor: IODIDE ION, MANGANESE (II) ION, TRIPHOSPHATE, ...
Authors:Kuwabara, N, Ho, K.
Deposit date:2019-11-03
Release date:2020-06-03
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of the RNA triphosphatase fromTrypanosoma cruziprovide insights into how it recognizes the 5'-end of the RNA substrate.
J.Biol.Chem., 295, 2020
6L7X
DownloadVisualize
BU of 6l7x by Molmil
Crystal structure of Cet1 from Trypanosoma cruzi in complex with #951 ligand
Descriptor: 1,3-dimethyl-7-propyl-purine-2,6-dione, SULFATE ION, mRNA_triPase domain-containing protein
Authors:Kuwabara, N, Ho, K.
Deposit date:2019-11-03
Release date:2020-06-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal structures of the RNA triphosphatase fromTrypanosoma cruziprovide insights into how it recognizes the 5'-end of the RNA substrate.
J.Biol.Chem., 295, 2020
6L7W
DownloadVisualize
BU of 6l7w by Molmil
Crystal structure of Cet1 from Trypanosoma cruzi in complex with manganese ion.
Descriptor: MANGANESE (II) ION, mRNA_triPase domain-containing protein
Authors:Kuwabara, N, Ho, K.
Deposit date:2019-11-03
Release date:2020-06-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of the RNA triphosphatase fromTrypanosoma cruziprovide insights into how it recognizes the 5'-end of the RNA substrate.
J.Biol.Chem., 295, 2020
6L7Y
DownloadVisualize
BU of 6l7y by Molmil
Crystal structure of Cet1 from Trypanosoma cruzi in complex with #466 ligand.
Descriptor: 3,4,6,7-tetrahydroacridine-1,8(2H,5H)-dione, SULFATE ION, mRNA_triPase domain-containing protein
Authors:Kuwabara, N, Ho, K.
Deposit date:2019-11-03
Release date:2020-06-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Crystal structures of the RNA triphosphatase fromTrypanosoma cruziprovide insights into how it recognizes the 5'-end of the RNA substrate.
J.Biol.Chem., 295, 2020
8H3M
DownloadVisualize
BU of 8h3m by Molmil
Conformation 1 of SARS-CoV-2 Omicron BA.1 Variant Spike protein complexed with MO1 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MO1 heavy chain, Spike glycoprotein
Authors:Ishimaru, H, Nishimura, M, Sutandhio, S, Shigematsu, H, Kato, K, Hasegawa, N, Mori, Y.
Deposit date:2022-10-09
Release date:2023-05-10
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (2.48 Å)
Cite:Identification and Analysis of Monoclonal Antibodies with Neutralizing Activity against Diverse SARS-CoV-2 Variants.
J.Virol., 97, 2023
8H3N
DownloadVisualize
BU of 8h3n by Molmil
Conformation 2 of SARS-CoV-2 Omicron BA.1 Variant Spike protein complexed with MO1 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MO1 heavy-chain, MO1 light chain, ...
Authors:Ishimaru, H, Nishimura, M, Sutandhio, S, Shigematsu, H, Kato, K, Hasegawa, N, Mori, Y.
Deposit date:2022-10-09
Release date:2023-05-10
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Identification and Analysis of Monoclonal Antibodies with Neutralizing Activity against Diverse SARS-CoV-2 Variants.
J.Virol., 97, 2023
5B1R
DownloadVisualize
BU of 5b1r by Molmil
Crystal structure of mouse CD72a CTLD
Descriptor: ACETATE ION, B-cell differentiation antigen CD72, GLYCEROL
Authors:Shinagawa, K, Numoto, N, Tsubata, T, Ito, N.
Deposit date:2015-12-15
Release date:2016-10-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:CD72 negatively regulates B lymphocyte responses to the lupus-related endogenous toll-like receptor 7 ligand Sm/RNP
J.Exp.Med., 213, 2016
3WJ2
DownloadVisualize
BU of 3wj2 by Molmil
Crystal structure of ESTFA (FE-lacking apo form)
Descriptor: Carboxylesterase
Authors:Ohara, K, Unno, H, Oshima, Y, Furukawa, K, Fujino, N, Hirooka, K, Hemmi, H, Takahashi, S, Nishino, T, Kusunoki, M, Nakayama, T.
Deposit date:2013-10-03
Release date:2014-07-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural insights into the low pH adaptation of a unique carboxylesterase from Ferroplasma: altering the pH optima of two carboxylesterases.
J.Biol.Chem., 289, 2014
3WJ1
DownloadVisualize
BU of 3wj1 by Molmil
Crystal structure of SSHESTI
Descriptor: Carboxylesterase, octyl beta-D-glucopyranoside
Authors:Ohara, K, Unno, H, Oshima, Y, Furukawa, K, Fujino, N, Hirooka, K, Hemmi, H, Takahashi, S, Nishino, T, Kusunoki, M, Nakayama, T.
Deposit date:2013-10-03
Release date:2014-07-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into the low pH adaptation of a unique carboxylesterase from Ferroplasma: altering the pH optima of two carboxylesterases.
J.Biol.Chem., 289, 2014

225946

數據於2024-10-09公開中

PDB statisticsPDBj update infoContact PDBjnumon