Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8BDC
DownloadVisualize
BU of 8bdc by Molmil
Human apo TRPM8 in a closed state (composite map)
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CHOLESTEROL HEMISUCCINATE, SODIUM ION, ...
Authors:Palchevskyi, S, Czarnocki-Cieciura, M, Vistoli, G, Gervasoni, S, Nowak, E, Beccari, A.R, Nowotny, M, Talarico, C.
Deposit date:2022-10-19
Release date:2023-11-01
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.65 Å)
Cite:Structure of human TRPM8 channel.
Commun Biol, 6, 2023
7O24
DownloadVisualize
BU of 7o24 by Molmil
Structure of the foamy viral protease-reverse transcriptase in complex with dsDNA.
Descriptor: DNA (5'-D(*AP*AP*CP*AP*GP*AP*GP*TP*GP*CP*GP*AP*CP*AP*CP*CP*TP*GP*AP*TP*TP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*CP*GP*CP*AP*CP*TP*CP*TP*G)-3'), Pr125Pol
Authors:Nowotny, M, Czarnocki-Cieciura, M.
Deposit date:2021-03-30
Release date:2021-06-30
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structures of Substrate Complexes of Foamy Viral Protease-Reverse Transcriptase.
J.Virol., 95, 2021
7Z0Z
DownloadVisualize
BU of 7z0z by Molmil
Abortive infection DNA polymerase AbiK from Lactococcus lactis, Y44F variant
Descriptor: AbiK
Authors:Figiel, M, Gapinska, M, Czarnocki-Cieciura, M, Zajko, W, Nowotny, M.
Deposit date:2022-02-24
Release date:2022-09-07
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Mechanism of protein-primed template-independent DNA synthesis by Abi polymerases.
Nucleic Acids Res., 50, 2022
7R06
DownloadVisualize
BU of 7r06 by Molmil
Abortive infection DNA polymerase AbiK from Lactococcus lactis
Descriptor: AbiK, DNA (5'-D(*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*C)-3')
Authors:Figiel, M, Nowotny, M, Gapinska, M, Czarnocki-Cieciura, M, Zajko, W.
Deposit date:2022-02-01
Release date:2022-09-07
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.27 Å)
Cite:Mechanism of protein-primed template-independent DNA synthesis by Abi polymerases.
Nucleic Acids Res., 50, 2022
7R07
DownloadVisualize
BU of 7r07 by Molmil
Abortive infection DNA polymerase AbiK from Lactococcus lactis
Descriptor: AbiK, DNA (5'-D(*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*C)-3'), MAGNESIUM ION
Authors:Figiel, M, Gapinska, M, Czarnocki-Cieciura, M, Zajko, W, Nowotny, M.
Deposit date:2022-02-01
Release date:2022-09-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mechanism of protein-primed template-independent DNA synthesis by Abi polymerases.
Nucleic Acids Res., 50, 2022
7PIK
DownloadVisualize
BU of 7pik by Molmil
Cryo-EM structure of E. coli TnsB in complex with right end fragment of Tn7 transposon
Descriptor: Right end fragment of Tn7 transposon, Transposon Tn7 transposition protein TnsB
Authors:Kaczmarska, Z, Czarnocki-Cieciura, M, Rawski, M, Nowotny, M.
Deposit date:2021-08-20
Release date:2022-06-15
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Structural basis of transposon end recognition explains central features of Tn7 transposition systems.
Mol.Cell, 82, 2022
8AB0
DownloadVisualize
BU of 8ab0 by Molmil
Complex of RecO-RecR-DNA from Thermus thermophilus.
Descriptor: DNA repair protein RecO, Oligo1, Oligo2, ...
Authors:Nirwal, S, Czarnocki-Cieciura, M, Chaudhary, A, Zajko, W, Skowronek, K, Chamera, S, Figiel, M, Nowotny, M.
Deposit date:2022-07-04
Release date:2023-04-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (6.09 Å)
Cite:Mechanism of RecF-RecO-RecR cooperation in bacterial homologous recombination.
Nat.Struct.Mol.Biol., 30, 2023
8A8J
DownloadVisualize
BU of 8a8j by Molmil
Complex of RecF and DNA from Thermus thermophilus.
Descriptor: DNA replication and repair protein RecF, MAGNESIUM ION, Oligo1, ...
Authors:Nirwal, S, Czarnocki-Cieciura, M, Chaudhary, A, Zajko, W, Skowronek, K, Chamera, S, Figiel, M, Nowotny, M.
Deposit date:2022-06-23
Release date:2023-04-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of RecF-RecO-RecR cooperation in bacterial homologous recombination.
Nat.Struct.Mol.Biol., 30, 2023
8A93
DownloadVisualize
BU of 8a93 by Molmil
Complex of RecF-RecR-DNA from Thermus thermophilus.
Descriptor: DNA replication and repair protein RecF, MAGNESIUM ION, Oligo1, ...
Authors:Nirwal, S, Czarnocki-Cieciura, M, Chaudhary, A, Zajko, W, Skowronek, K, Chamera, S, Figiel, M, Nowotny, M.
Deposit date:2022-06-27
Release date:2023-04-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Mechanism of RecF-RecO-RecR cooperation in bacterial homologous recombination.
Nat.Struct.Mol.Biol., 30, 2023
8BPR
DownloadVisualize
BU of 8bpr by Molmil
Complex of RecF-RecO-RecR-DNA from Thermus thermophilus (low resolution reconstruction).
Descriptor: DNA repair protein RecO, DNA replication and repair protein RecF, MAGNESIUM ION, ...
Authors:Nirwal, S, Czarnocki-Cieciura, M, Chaudhary, A, Zajko, W, Skowronek, K, Chamera, S, Figiel, M, Nowotny, M.
Deposit date:2022-11-17
Release date:2023-04-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Mechanism of RecF-RecO-RecR cooperation in bacterial homologous recombination.
Nat.Struct.Mol.Biol., 30, 2023
7O0H
DownloadVisualize
BU of 7o0h by Molmil
Structure of the foamy viral protease-reverse transcriptase dRH in complex with ds DNA.
Descriptor: DNA (5'-D(*AP*AP*CP*AP*GP*AP*GP*TP*GP*CP*GP*AP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*TP*CP*GP*CP*AP*CP*TP*CP*TP*G)-3'), Pr125Pol
Authors:Nowak, E, Nowacka, M, Nowotny, M.
Deposit date:2021-03-26
Release date:2021-06-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Structures of Substrate Complexes of Foamy Viral Protease-Reverse Transcriptase.
J.Virol., 95, 2021
7O0G
DownloadVisualize
BU of 7o0g by Molmil
Structure of the foamy viral protease-reverse transcriptase in complex with RNA/DNA hybrid.
Descriptor: DNA (5'-D(*CP*CP*TP*CP*TP*CP*CP*TP*GP*GP*AP*CP*AP*AP*G)-3'), Pr125Pol, RNA (5'-R(*UP*UP*CP*UP*UP*GP*UP*CP*CP*AP*GP*GP*AP*GP*AP*GP*G)-3')
Authors:Nowak, E, Nowacka, M, Nowotny, M.
Deposit date:2021-03-26
Release date:2021-06-30
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of Substrate Complexes of Foamy Viral Protease-Reverse Transcriptase.
J.Virol., 95, 2021
4CT5
DownloadVisualize
BU of 4ct5 by Molmil
DDX6
Descriptor: ACETATE ION, DDX6
Authors:Ozgur, S, Basquin, J, Conti, E.
Deposit date:2014-03-12
Release date:2014-05-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and Biochemical Insights to the Role of the Ccr4-not Complex and Ddx6 ATPase in Microrna Repression.
Mol.Cell, 54, 2014
4CT6
DownloadVisualize
BU of 4ct6 by Molmil
CNOT9-CNOT1 complex
Descriptor: CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1, CELL DIFFERENTIATION PROTEIN RCD1 HOMOLOG
Authors:Basquin, J, Ozgur, S, Conti, E.
Deposit date:2014-03-12
Release date:2014-05-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Structural and Biochemical Insights to the Role of the Ccr4-not Complex and Ddx6 ATPase in Microrna Repression.
Mol.Cell, 54, 2014
8P00
DownloadVisualize
BU of 8p00 by Molmil
Cryo-EM structure of Rotavirus B NSP2
Descriptor: Non-structural protein 2
Authors:Chamera, S, Nowotny, M.
Deposit date:2023-05-09
Release date:2024-02-28
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of rotavirus B NSP2 reveals its unique tertiary architecture.
J.Virol., 98, 2024
6F3H
DownloadVisualize
BU of 6f3h by Molmil
Crystal structure of Dss1 exoribonuclease active site mutant D477N from Candida glabrata
Descriptor: Exoribonuclease II, mitochondrial, MAGNESIUM ION, ...
Authors:Razew, M, Nowak, E, Nowotny, M.
Deposit date:2017-11-28
Release date:2018-01-17
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Structural analysis of mtEXO mitochondrial RNA degradosome reveals tight coupling of nuclease and helicase components.
Nat Commun, 9, 2018
6F4A
DownloadVisualize
BU of 6f4a by Molmil
Yeast mitochondrial RNA degradosome complex mtEXO
Descriptor: Exoribonuclease II, mitochondrial, RNA (5'-R(P*AP*GP*AP*UP*AP*C)-3'), ...
Authors:Razew, M, Nowak, E, Nowotny, M.
Deposit date:2017-11-29
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Structural analysis of mtEXO mitochondrial RNA degradosome reveals tight coupling of nuclease and helicase components.
Nat Commun, 9, 2018
7R08
DownloadVisualize
BU of 7r08 by Molmil
Abortive infection DNA polymerase Abi-P2
Descriptor: Reverse transcriptase
Authors:Gapinska, M.A, Figiel, M, Czarnocki Cieciura, M, Nowotny, M, Zajko, W.
Deposit date:2022-02-01
Release date:2022-09-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mechanism of protein-primed template-independent DNA synthesis by Abi polymerases.
Nucleic Acids Res., 50, 2022
4CT4
DownloadVisualize
BU of 4ct4 by Molmil
CNOT1 MIF4G domain - DDX6 complex
Descriptor: CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Ozgur, S, Basquin, J, Conti, E.
Deposit date:2014-03-12
Release date:2014-05-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Biochemical Insights to the Role of the Ccr4- not Complex and Ddx6 ATPase in Microrna Repression.
Mol.Cell, 54, 2014
4CT7
DownloadVisualize
BU of 4ct7 by Molmil
CNOT9-CNOT1 complex with bound tryptophan
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1, CELL DIFFERENTIATION PROTEIN RCD1 HOMOLOG, ...
Authors:Basquin, J, Ozgur, S, Conti, E.
Deposit date:2014-03-12
Release date:2014-05-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.897 Å)
Cite:Structural and Biochemical Insights to the Role of the Ccr4-not Complex and Ddx6 ATPase in Microrna Repression.
Mol.Cell, 54, 2014
4CV5
DownloadVisualize
BU of 4cv5 by Molmil
yeast NOT1 CN9BD-CAF40 complex
Descriptor: GENERAL NEGATIVE REGULATOR OF TRANSCRIPTION SUBUNIT 1, HEXATANTALUM DODECABROMIDE, PROTEIN CAF40
Authors:Basquin, J, Conti, E.
Deposit date:2014-03-23
Release date:2014-05-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.807 Å)
Cite:Structural and Biochemical Insights to the Role of the Ccr4-not Complex and Ddx6 ATPase in Microrna Repression.
Mol.Cell, 54, 2014

227111

數據於2024-11-06公開中

PDB statisticsPDBj update infoContact PDBjnumon