Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6AAE
DownloadVisualize
BU of 6aae by Molmil
Crystal structure of Chloramphenicol-Metabolizaing Enzyme EstDL136
Descriptor: DI(HYDROXYETHYL)ETHER, Esterase, PENTAETHYLENE GLYCOL
Authors:Kim, S.H, Kang, P.A, Han, K.T, Lee, S.W, Rhee, S.K.
Deposit date:2018-07-18
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.641 Å)
Cite:Crystal structure of chloramphenicol-metabolizing enzyme EstDL136 from a metagenome.
PLoS ONE, 14, 2019
2ECR
DownloadVisualize
BU of 2ecr by Molmil
Crystal structure of the ligand-free form of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase
Descriptor: flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase
Authors:Kim, S.H, Hisano, T, Iwasaki, W, Ebihara, A, Miki, K.
Deposit date:2007-02-13
Release date:2008-01-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8: Structural basis for the flavin affinity
Proteins, 70, 2008
2R62
DownloadVisualize
BU of 2r62 by Molmil
Crystal structure of Helicobacter pylori ATP dependent protease, FtsH
Descriptor: Cell division protease ftsH homolog
Authors:Kim, S.H, Kang, G.B, Song, H.-E, Park, S.J, Bae, M.-H, Eom, S.H.
Deposit date:2007-09-05
Release date:2008-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural studies on Helicobacter pyloriATP-dependent protease, FtsH
J.SYNCHROTRON RADIAT., 15, 2008
2R65
DownloadVisualize
BU of 2r65 by Molmil
Crystal structure of Helicobacter pylori ATP dependent protease, FtsH ADP complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division protease ftsH homolog
Authors:Kim, S.H, Kang, G.B, Song, H.-E, Park, S.J, Bae, M.-H, Eom, S.H.
Deposit date:2007-09-05
Release date:2008-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural studies on Helicobacter pyloriATP-dependent protease, FtsH
J.SYNCHROTRON RADIAT., 15, 2008
2ED4
DownloadVisualize
BU of 2ed4 by Molmil
Crystal structure of flavin reductase HpaC complexed with FAD and NAD
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, flavin reductase (HpaC) of 4-hydroxyphenylacetate 3-monooxygenae
Authors:Kim, S.H, Hisano, T, Iwasaki, W, Ebihara, A, Miki, K.
Deposit date:2007-02-14
Release date:2008-01-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8: Structural basis for the flavin affinity
Proteins, 70, 2008
2ECU
DownloadVisualize
BU of 2ecu by Molmil
Crystal structure of flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, DODECAETHYLENE GLYCOL, flavin reductase (HpaC) of 4-hydroxyphenylacetate 3-monooxygnease
Authors:Kim, S.H, Hisano, T, Iwasaki, W, Ebihara, A, Miki, K.
Deposit date:2007-02-14
Release date:2008-01-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8: Structural basis for the flavin affinity
Proteins, 70, 2008
7VTF
DownloadVisualize
BU of 7vtf by Molmil
cytidine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
Descriptor: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, Pseudouridine kinase
Authors:Kim, S.H, Rhee, S.
Deposit date:2021-10-29
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.20203447 Å)
Cite:Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
7VTD
DownloadVisualize
BU of 7vtd by Molmil
Unliganded structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
Descriptor: POTASSIUM ION, Pseudouridine kinase
Authors:Kim, S.H, Rhee, S.
Deposit date:2021-10-29
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1505487 Å)
Cite:Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
7VTE
DownloadVisualize
BU of 7vte by Molmil
uridine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
Descriptor: POTASSIUM ION, Pseudouridine kinase, URIDINE
Authors:Kim, S.H, Rhee, S.
Deposit date:2021-10-29
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15296578 Å)
Cite:Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
7VVA
DownloadVisualize
BU of 7vva by Molmil
Pseudouridine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
Descriptor: 5-[(2~{S},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1~{H}-pyrimidine-2,4-dione, Pseudouridine kinase
Authors:Kim, S.H, Rhee, S.
Deposit date:2021-11-05
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.75029182 Å)
Cite:Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
7VTG
DownloadVisualize
BU of 7vtg by Molmil
Pseudouridine bound structure of Pseudouridine kinase (PUKI) S30A mutant from Escherichia coli strain B
Descriptor: 5-[(2~{S},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1~{H}-pyrimidine-2,4-dione, Pseudouridine kinase
Authors:Kim, S.H, Rhee, S.
Deposit date:2021-10-29
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.89859128 Å)
Cite:Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI.
J.Biol.Chem., 298, 2022
6IEY
DownloadVisualize
BU of 6iey by Molmil
Crystal structure of Chloramphenicol-Metabolizaing Enzyme EstDL136-Chloramphenicol complex
Descriptor: CHLORAMPHENICOL, Esterase
Authors:Kim, S.H, Kang, P.A, Han, K.T, Lee, S.W, Rhee, S.K.
Deposit date:2018-09-18
Release date:2019-02-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Crystal structure of chloramphenicol-metabolizing enzyme EstDL136 from a metagenome.
PLoS ONE, 14, 2019
7DP0
DownloadVisualize
BU of 7dp0 by Molmil
Crystal structure of FMN and NADPH-dependent nitroreductase NfnB from sphigopyxis sp. strain HMH
Descriptor: FLAVIN MONONUCLEOTIDE, Nitroreductase family protein
Authors:Kim, S.H, Park, S, Rhee, S.
Deposit date:2020-12-17
Release date:2021-09-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.10004139 Å)
Cite:Structure and substrate specificity determinants of NfnB, a dinitroaniline herbicide-catabolizing nitroreductase from Sphingopyxis sp. strain HMH.
J.Biol.Chem., 297, 2021
7DP1
DownloadVisualize
BU of 7dp1 by Molmil
Crystal structure of FMN and NADPH-dependent nitroreductase NfnB mutant Y88A derived from sphigopyxis sp. strain HMH
Descriptor: FLAVIN MONONUCLEOTIDE, Nitroreductase family protein
Authors:Kim, S.H, Park, S, Rhee, S.
Deposit date:2020-12-17
Release date:2021-09-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.003496 Å)
Cite:Structure and substrate specificity determinants of NfnB, a dinitroaniline herbicide-catabolizing nitroreductase from Sphingopyxis sp. strain HMH.
J.Biol.Chem., 297, 2021
7DP2
DownloadVisualize
BU of 7dp2 by Molmil
Crystal structure of FMN and NADPH-dependent nitroreductase NfnB mutant Y88F derived from sphigopyxis sp. strain HMH
Descriptor: FLAVIN MONONUCLEOTIDE, Nitroreductase family protein
Authors:Kim, S.H, Park, S, Rhee, S.
Deposit date:2020-12-17
Release date:2021-09-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.40008736 Å)
Cite:Structure and substrate specificity determinants of NfnB, a dinitroaniline herbicide-catabolizing nitroreductase from Sphingopyxis sp. strain HMH.
J.Biol.Chem., 297, 2021
7C1Z
DownloadVisualize
BU of 7c1z by Molmil
ATP bound structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PfkB-like carbohydrate kinase family protein, ...
Authors:Kim, S.H, Rhee, S.
Deposit date:2020-05-06
Release date:2020-11-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.09617043 Å)
Cite:Structural basis for the substrate specificity and catalytic features of pseudouridine kinase from Arabidopsis thaliana.
Nucleic Acids Res., 49, 2021
7C1X
DownloadVisualize
BU of 7c1x by Molmil
Unliganded structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
Descriptor: PfkB-like carbohydrate kinase family protein, SODIUM ION
Authors:Kim, S.H, Rhee, S.
Deposit date:2020-05-06
Release date:2020-11-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.38942838 Å)
Cite:Structural basis for the substrate specificity and catalytic features of pseudouridine kinase from Arabidopsis thaliana.
Nucleic Acids Res., 49, 2021
7C1Y
DownloadVisualize
BU of 7c1y by Molmil
Pseudouridine and ADP bound structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
Descriptor: 5-[(2~{S},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1~{H}-pyrimidine-2,4-dione, ADENOSINE-5'-DIPHOSPHATE, PfkB-like carbohydrate kinase family protein, ...
Authors:Kim, S.H, Rhee, S.
Deposit date:2020-05-06
Release date:2020-11-18
Last modified:2021-06-02
Method:X-RAY DIFFRACTION (2.083426 Å)
Cite:Structural basis for the substrate specificity and catalytic features of pseudouridine kinase from Arabidopsis thaliana.
Nucleic Acids Res., 49, 2021
4UZ0
DownloadVisualize
BU of 4uz0 by Molmil
Crystal Structure of apoptosis repressor with CARD (ARC)
Descriptor: GLYCEROL, NUCLEOLAR PROTEIN 3
Authors:Kim, S.H, Jeong, J.H, Jang, T.H, Kim, Y.G, Park, H.H.
Deposit date:2014-09-04
Release date:2015-07-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Crystal Structure of Caspase Recruiting Domain (Card) of Apoptosis Repressor with Card (Arc) and its Implication in Inhibition of Apoptosis.
Sci.Rep., 5, 2015
1HPB
DownloadVisualize
BU of 1hpb by Molmil
THE BACTERIAL PERIPLASMIC HISTIDINE-BINDING PROTEIN: STRUCTURE(SLASH)FUNCTION ANALYSIS OF THE LIGAND-BINDING SITE AND COMPARISON WITH RELATED PROTEINS
Descriptor: HISTIDINE, HISTIDINE-BINDING PROTEIN
Authors:Kim, S.H, Oh, B.H.
Deposit date:1993-09-30
Release date:1995-01-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The bacterial periplasmic histidine-binding protein. structure/function analysis of the ligand-binding site and comparison with related proteins.
J.Biol.Chem., 269, 1994
1JEO
DownloadVisualize
BU of 1jeo by Molmil
Crystal Structure of the Hypothetical Protein MJ1247 from Methanococcus jannaschii at 2.0 A Resolution Infers a Molecular Function of 3-Hexulose-6-Phosphate isomerase.
Descriptor: CITRIC ACID, HYPOTHETICAL PROTEIN MJ1247
Authors:Martinez-Cruz, L.A, Dreyer, M.K, Boisvert, D.C, Yokota, H, Martinez-Chantar, M.L, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2001-06-18
Release date:2002-02-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of MJ1247 protein from M. jannaschii at 2.0 A resolution infers a molecular function of 3-hexulose-6-phosphate isomerase.
Structure, 10, 2002
1S7D
DownloadVisualize
BU of 1s7d by Molmil
Crystal structure of refined tetragonal crystal of YodA from Escherichia coli
Descriptor: Metal-binding Protein yodA, ZINC ION
Authors:Shin, D.H, Yokota, H, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-29
Release date:2004-08-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structure of refined tetragonal crystal of YodA from Escherichia coli
TO BE PUBLISHED
1S7C
DownloadVisualize
BU of 1s7c by Molmil
Crystal structure of MES buffer bound form of glyceraldehyde 3-phosphate dehydrogenase from Escherichia coli
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Glyceraldehyde 3-phosphate dehydrogenase A, SULFATE ION
Authors:Shin, D.H, Thor, J, Yokota, H, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-29
Release date:2004-08-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of MES buffer bound form of glyceraldehyde 3-phosphate dehydrogenase from Escherichia coli
To be Published
1SBQ
DownloadVisualize
BU of 1sbq by Molmil
Crystal Structure of methenyltetrahydrofolate synthetase from Mycoplasma pneumoniae at 2.2 resolution
Descriptor: 5,10-Methenyltetrahydrofolate synthetase homolog, SULFATE ION
Authors:Chen, S, Shin, D.H, Pufan, R, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-02-10
Release date:2004-08-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of methenyltetrahydrofolate synthetase from Mycoplasma pneumoniae (GI: 13508087) at 2.2 A resolution
Proteins, 56, 2004
1CKP
DownloadVisualize
BU of 1ckp by Molmil
HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE INHIBITOR PURVALANOL B
Descriptor: 1,2-ETHANEDIOL, PROTEIN (CYCLIN-DEPENDENT PROTEIN KINASE 2), PURVALANOL B
Authors:Gray, N.S, Thunnissen, A.M.W.H, Schultz, P.G, Kim, S.H.
Deposit date:1998-07-14
Release date:1999-01-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Exploiting chemical libraries, structure, and genomics in the search for kinase inhibitors.
Science, 281, 1998

226262

數據於2024-10-16公開中

PDB statisticsPDBj update infoContact PDBjnumon