7BE9
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7BG8
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4BTQ
| Coordinates of the bacteriophage phi6 capsid subunits fitted into the cryoEM map EMD-1206 | Descriptor: | MAJOR INNER PROTEIN P1 | Authors: | Nemecek, D, Boura, E, Wu, W, Cheng, N, Plevka, P, Qiao, J, Mindich, L, Heymann, J.B, Hurley, J.H, Steven, A.C. | Deposit date: | 2013-06-18 | Release date: | 2013-12-11 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (7.5 Å) | Cite: | Subunit Folds and Maturation Pathway of a Dsrna Virus Capsid. Structure, 21, 2013
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4BTG
| Coordinates of the bacteriophage phi6 capsid subunits (P1A and P1B) fitted into the cryoEM reconstruction of the procapsid at 4.4 A resolution | Descriptor: | MAJOR INNER PROTEIN P1 | Authors: | Nemecek, D, Boura, E, Wu, W, Cheng, N, Plevka, P, Qiao, J, Mindich, L, Heymann, J.B, Hurley, J.H, Steven, A.C. | Deposit date: | 2013-06-17 | Release date: | 2013-08-14 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (4.4 Å) | Cite: | Subunit Folds and Maturation Pathway of a Dsrna Virus Capsid. Structure, 21, 2013
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5O6A
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5O6V
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6TO8
| Neck of empty GTA particle computed with C12 symmetry | Descriptor: | Adaptor protein Rcc01688, Portal protein Rcc01684 | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | Deposit date: | 2019-12-11 | Release date: | 2020-07-22 | Last modified: | 2024-05-22 | Method: | ELECTRON MICROSCOPY (3.36 Å) | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
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6TEA
| Tail of native GTA particle computed with helical refinement, C6 symmetry | Descriptor: | Phage major tail protein, TP901-1 family | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | Deposit date: | 2019-11-11 | Release date: | 2020-07-22 | Last modified: | 2024-05-22 | Method: | ELECTRON MICROSCOPY (3.89 Å) | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
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6TB9
| Capsid of native GTA particle computed with C5 symmetry | Descriptor: | Head spike base Rcc01079, Head spike fiber Rcc01080, Major capsid protein Rcc01687 | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | Deposit date: | 2019-11-01 | Release date: | 2020-07-22 | Last modified: | 2022-02-16 | Method: | ELECTRON MICROSCOPY (3.56 Å) | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
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6TSU
| Capsid of empty GTA particle computed with C5 symmetry | Descriptor: | Major capsid protein Rcc01687, Uncharacterized protein | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | Deposit date: | 2019-12-21 | Release date: | 2020-07-22 | Last modified: | 2022-02-16 | Method: | ELECTRON MICROSCOPY (3.42 Å) | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
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6TOA
| Neck of empty GTA particle computed with C6 symmetry | Descriptor: | Adaptor protein Rcc01688, Portal protein Rcc01684, Stopper protein Rcc01689, ... | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | Deposit date: | 2019-12-11 | Release date: | 2020-07-22 | Last modified: | 2024-05-22 | Method: | ELECTRON MICROSCOPY (3.47 Å) | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
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6TE9
| Neck of native GTA particle computed with C6 symmetry | Descriptor: | Adaptor protein Rcc01688, Phage major tail protein, TP901-1 family, ... | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | Deposit date: | 2019-11-11 | Release date: | 2020-07-22 | Last modified: | 2024-05-22 | Method: | ELECTRON MICROSCOPY (3.58 Å) | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
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6TSV
| Tail of empty GTA particle computed with helical refinement, C6 symmetry | Descriptor: | Tail tube protein Rcc01691 | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | Deposit date: | 2019-12-21 | Release date: | 2020-07-22 | Last modified: | 2024-05-22 | Method: | ELECTRON MICROSCOPY (3.78 Å) | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
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6TSW
| Isometric capsid of empty GTA particle computed with I4(I,n25r) symmetry | Descriptor: | Major capsid protein Rcc01687 | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | Deposit date: | 2019-12-21 | Release date: | 2020-07-22 | Last modified: | 2024-05-22 | Method: | ELECTRON MICROSCOPY (4.03 Å) | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
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6TE8
| Neck of native GTA particle computed with C12 symmetry | Descriptor: | Adaptor protein Rcc01688, Phage portal protein, HK97 family | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | Deposit date: | 2019-11-11 | Release date: | 2020-07-22 | Last modified: | 2024-05-22 | Method: | ELECTRON MICROSCOPY (3.32 Å) | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
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6TEB
| Tail-baseplate interface of native GTA particle computed with C6 symmetry | Descriptor: | Distal tail protein Rcc01695, Tail tube protein Rcc01691 | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | Deposit date: | 2019-11-11 | Release date: | 2020-07-22 | Last modified: | 2024-05-22 | Method: | ELECTRON MICROSCOPY (4.14 Å) | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
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6TBA
| Virion of native gene transfer agent (GTA) particle | Descriptor: | IRON/SULFUR CLUSTER, Phage major capsid protein, HK97 family, ... | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | Deposit date: | 2019-11-01 | Release date: | 2020-07-22 | Last modified: | 2024-05-22 | Method: | ELECTRON MICROSCOPY (4.54 Å) | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
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6TEH
| Baseplate of native GTA particle computed with C3 symmetry | Descriptor: | IRON/SULFUR CLUSTER, Putative gene transfer agent protein | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | Deposit date: | 2019-11-12 | Release date: | 2020-07-22 | Last modified: | 2024-05-22 | Method: | ELECTRON MICROSCOPY (3.99 Å) | Cite: | Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
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6TUI
| Virion of empty GTA particle | Descriptor: | Adaptor protein Rcc01688, Phage major capsid protein, HK97 family, ... | Authors: | Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. | Deposit date: | 2020-01-07 | Release date: | 2020-10-14 | Last modified: | 2024-05-22 | Method: | ELECTRON MICROSCOPY (10.47 Å) | Cite: | Virion of empty GTA particle Nat Commun, 11, 2020
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5L8Q
| Structure of deformed wing virus, a honeybee pathogen | Descriptor: | URIDINE-5'-MONOPHOSPHATE, VP1, VP2, ... | Authors: | Skubnik, K, Novacek, J, Fuzik, T, Pridal, A, Paxton, R, Plevka, P. | Deposit date: | 2016-06-08 | Release date: | 2017-03-29 | Last modified: | 2024-05-15 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Structure of deformed wing virus, a major honey bee pathogen. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
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5L7Q
| Structure of deformed wing virus, a honeybee pathogen | Descriptor: | VP1, vp2, vp3 | Authors: | Skubnik, K, Novacek, J, Fuzik, T, Pridal, A, Paxton, R, Plevka, P. | Deposit date: | 2016-06-03 | Release date: | 2017-03-29 | Last modified: | 2024-05-15 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Structure of deformed wing virus, a major honey bee pathogen. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
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5LK8
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5LVC
| Aichi virus 1: empty particle | Descriptor: | VP0, VP1, VP3 | Authors: | Sabin, C, Fuzik, T, Skubnik, K, Palkova, L, Lindberg, A.M, Plevka, P. | Deposit date: | 2016-09-13 | Release date: | 2016-12-14 | Last modified: | 2024-05-15 | Method: | ELECTRON MICROSCOPY (4.2 Å) | Cite: | Structure of Aichi Virus 1 and Its Empty Particle: Clues to Kobuvirus Genome Release Mechanism. J.Virol., 90, 2016
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5LK7
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5LI4
| bacteriophage phi812K1-420 tail sheath protein after contraction | Descriptor: | tail sheath protein | Authors: | Novacek, J, Siborova, M, Benesik, M, Pantucek, R, Doskar, J, Plevka, P. | Deposit date: | 2016-07-14 | Release date: | 2017-07-19 | Last modified: | 2024-05-15 | Method: | ELECTRON MICROSCOPY (4.2 Å) | Cite: | Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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