Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4QO1
DownloadVisualize
BU of 4qo1 by Molmil
p53 DNA binding domain in complex with Nb139
Descriptor: Cellular tumor antigen p53, Nb139 Nanobody against the DNA-binding domain of p53, ZINC ION
Authors:De Gieter, S, Bethuyne, J, Gettemans, J, Garcia-Pino, A, Loris, R.
Deposit date:2014-06-19
Release date:2014-10-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.924 Å)
Cite:A nanobody modulates the p53 transcriptional program without perturbing its functional architecture.
Nucleic Acids Res., 42, 2014
3ZBE
DownloadVisualize
BU of 3zbe by Molmil
E. coli O157 ParE2-associated antitoxin 2 (PaaA2)
Descriptor: PAAA2
Authors:Sterckx, Y.G.J, Van Nuland, N.A.J, Vranken, W.F, Loris, R.
Deposit date:2012-11-08
Release date:2014-01-15
Last modified:2024-01-31
Method:SOLUTION NMR
Cite:Small-Angle X-Ray Scattering- and Nuclear Magnetic Resonance-Derived Conformational Ensemble of the Highly Flexible Antitoxin Paaa2.
Structure, 22, 2014
4ELY
DownloadVisualize
BU of 4ely by Molmil
CCDBVFI:GYRA14EC
Descriptor: CHLORIDE ION, CcdB, DNA gyrase subunit A, ...
Authors:De Jonge, N, Simic, R, Buts, L, Haesaerts, S, Roelants, K, Garcia-Pino, A, Sterckx, Y, De Greve, H, Lah, J, Loris, R.
Deposit date:2012-04-11
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.932 Å)
Cite:Alternative interactions define gyrase specificity in the CcdB family.
Mol.Microbiol., 84, 2012
3M7H
DownloadVisualize
BU of 3m7h by Molmil
Crystal structure of the bacteriocin LLPA from Pseudomonas sp.
Descriptor: Putidacin L1
Authors:Garcia-Pino, A, Loris, R.
Deposit date:2010-03-16
Release date:2011-03-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Determinants for Activity and Specificity of the Bacterial Toxin LlpA
Plos Pathog., 9, 2013
1G8W
DownloadVisualize
BU of 1g8w by Molmil
IMPROVED STRUCTURE OF PHYTOHEMAGGLUTININ-L FROM THE KIDNEY BEAN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, LEUCOAGGLUTINATING PHYTOHEMAGGLUTININ, ...
Authors:Buts, L, Hamelryck, T.W, Dao-Thi, M, Loris, R, Wyns, L, Etzler, M.E.
Deposit date:2000-11-21
Release date:2000-12-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Weak protein-protein interactions in lectins: the crystal structure of a vegetative lectin from the legume Dolichos biflorus.
J.Mol.Biol., 309, 2001
1LES
DownloadVisualize
BU of 1les by Molmil
LENTIL LECTIN COMPLEXED WITH SUCROSE
Descriptor: CALCIUM ION, LENTIL LECTIN, MANGANESE (II) ION, ...
Authors:Hamelryck, T, Loris, R.
Deposit date:1995-08-23
Release date:1995-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:NMR, molecular modeling, and crystallographic studies of lentil lectin-sucrose interaction.
J.Biol.Chem., 270, 1995
4Z33
DownloadVisualize
BU of 4z33 by Molmil
Crystal structure of the syntenin PDZ1 and PDZ2 tandem in complex with the Frizzled 7 C-terminal fragment and PIP2
Descriptor: ACETATE ION, D-MYO-INOSITOL-4,5-BISPHOSPHATE, GLYCEROL, ...
Authors:Egea-Jimenez, A.L, Gallardo, R, Garcia-Pino, A, Ivarsson, Y, Wawrzyniak, A.M, Kashyap, R, Loris, R, Schymkowitz, J, Rousseau, F, Zimmermann, P.
Deposit date:2015-03-30
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of the syntenin PDZ1 and PDZ2 tandem in complex with the Frizzled 7 C-terminal fragment and PIP2
To Be Published
8A0X
DownloadVisualize
BU of 8a0x by Molmil
Crystal structure of the HigB2-HigA2 tetramer in complex with operator DNA
Descriptor: Antitoxin HigA-2, DNA (30-MER), DNA (31-MER), ...
Authors:Hadzi, S, Loris, R.
Deposit date:2022-05-30
Release date:2023-05-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.296 Å)
Cite:Fuzzy DNA recognition by a prokaryotic transcription factor
To Be Published
8A0W
DownloadVisualize
BU of 8a0w by Molmil
Crystal structure of the HigA2 antitoxin in complex with operator DNA
Descriptor: Antitoxin HigA-2, DNA (17-MER), PHOSPHATE ION
Authors:Hadzi, S, Loris, R.
Deposit date:2022-05-30
Release date:2023-05-03
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.334 Å)
Cite:Fuzzy recognition by the prokaryotic transcription factor HigA2 from Vibrio cholerae.
Nat Commun, 15, 2024
4HOH
DownloadVisualize
BU of 4hoh by Molmil
RIBONUCLEASE T1 (THR93ALA MUTANT) COMPLEXED WITH 2'GMP
Descriptor: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, PROTEIN (RIBONUCLEASE T1)
Authors:Langhorst, U, Loris, R, Denisov, V.P, Doumen, J, Roose, P, Maes, D, Halle, B, Steyaert, J.
Deposit date:1998-09-14
Release date:1998-09-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Dissection of the structural and functional role of a conserved hydration site in RNase T1.
Protein Sci., 8, 1999
4ELZ
DownloadVisualize
BU of 4elz by Molmil
CCDBVFI:GYRA14VFI
Descriptor: CcdB, DNA gyrase subunit A, GLYCEROL
Authors:De Jonge, N, Simic, M, Buts, L, Haesaerts, S, Roelants, K, Garcia-Pino, A, Sterckx, Y, De Greve, H, Lah, J, Loris, R.
Deposit date:2012-04-11
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Alternative interactions define gyrase specificity in the CcdB family.
Mol.Microbiol., 84, 2012
6XX9
DownloadVisualize
BU of 6xx9 by Molmil
Arabidopsis thaliana Casein Kinase 2 (CK2) alpha-1 crystal form III
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Casein kinase II subunit alpha-1, SULFATE ION
Authors:Demulder, M, De Veylder, L, Loris, R.
Deposit date:2020-01-27
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of Arabidopsis thaliana casein kinase 2 alpha 1.
Acta Crystallogr.,Sect.F, 76, 2020
6XX7
DownloadVisualize
BU of 6xx7 by Molmil
Arabidopsis thaliana Casein Kinase 2 (CK2) alpha-1 crystal in complex with ANP
Descriptor: CHLORIDE ION, Casein kinase II subunit alpha-1, MAGNESIUM ION, ...
Authors:Demulder, M, De Veylder, L, Loris, R.
Deposit date:2020-01-27
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Arabidopsis thaliana casein kinase 2 alpha 1.
Acta Crystallogr.,Sect.F, 76, 2020
5MI3
DownloadVisualize
BU of 5mi3 by Molmil
Structure of phosphorylated translation elongation factor EF-Tu from E. coli
Descriptor: Elongation factor Tu 1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Talavera, A, Hendrix, J, Versees, W, De Gieter, S, Castro-Roa, D, Jurenas, D, Van Nerom, K, Vandenberk, N, Barth, A, De Greve, H, Hofkens, J, Zenkin, N, Loris, R, Garcia-Pino, A.
Deposit date:2016-11-27
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors.
Sci Adv, 4, 2018
5MJE
DownloadVisualize
BU of 5mje by Molmil
Crystal structure of the HigB2 toxin in complex with Nb8
Descriptor: Cytotoxic translational repressor of toxin-antitoxin stability system, DI(HYDROXYETHYL)ETHER, Nanobody 8, ...
Authors:Hadzi, S, Loris, R.
Deposit date:2016-11-30
Release date:2017-04-05
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
6Y2S
DownloadVisualize
BU of 6y2s by Molmil
Escherichia coli R318A RnlA endoribonuclease (single alanine mutant of RnlA)
Descriptor: mRNA endoribonuclease toxin LS
Authors:Garcia-Rodriguez, G, Loris, R.
Deposit date:2020-02-17
Release date:2021-03-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.79 Å)
Cite:Quaternary structure changes control ribonuclease activity of RnlA toxin.
To Be Published
6Y2R
DownloadVisualize
BU of 6y2r by Molmil
Escherichia coli R255A RnlA endoribonuclease (single alanine mutant of RnlA)
Descriptor: mRNA endoribonuclease toxin LS
Authors:Garcia-Rodriguez, G, Loris, R.
Deposit date:2020-02-17
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.89 Å)
Cite:Alternative dimerization is required for activity and inhibition of the HEPN ribonuclease RnlA.
Nucleic Acids Res., 49, 2021
5MI8
DownloadVisualize
BU of 5mi8 by Molmil
Structure of the phosphomimetic mutant of EF-Tu T383E
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, BETA-MERCAPTOETHANOL, ...
Authors:Talavera, A, Hendrix, J, Versees, W, De Gieter, S, Castro-Roa, D, Jurenas, D, Van Nerom, K, Vandenberk, N, Barth, A, De Greve, H, Hofkens, J, Zenkin, N, Loris, R, Garcia-Pino, A.
Deposit date:2016-11-27
Release date:2017-12-20
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors.
Sci Adv, 4, 2018
5MI9
DownloadVisualize
BU of 5mi9 by Molmil
Structure of the phosphomimetic mutant of the elongation factor EF-Tu T62E
Descriptor: Elongation factor Tu 1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Talavera, A, Hendrix, J, Versees, W, De Gieter, S, Castro-Roa, D, Jurenas, D, Van Nerom, K, Vandenberk, N, Barth, A, De Greve, H, Hofkens, J, Zenkin, N, Loris, R, Garcia-Pino, A.
Deposit date:2016-11-27
Release date:2017-12-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors.
Sci Adv, 4, 2018
7AEX
DownloadVisualize
BU of 7aex by Molmil
NRD-HEPN domains (N-terminal truncation) of Escherichia coli RnlA endoribonuclease
Descriptor: mRNA endoribonuclease toxin LS
Authors:Garcia-Rodriguez, G, Loris, R.
Deposit date:2020-09-18
Release date:2021-06-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Alternative dimerization is required for activity and inhibition of the HEPN ribonuclease RnlA.
Nucleic Acids Res., 49, 2021
1FZU
DownloadVisualize
BU of 1fzu by Molmil
RNAse T1 V78A mutant
Descriptor: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, GUANYL-SPECIFIC RIBONUCLEASE T1
Authors:De Vos, S, Loris, R, Steyaert, J.
Deposit date:2000-10-04
Release date:2000-10-25
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Hydrophobic core manipulations in ribonuclease T1.
Biochemistry, 40, 2001
1G02
DownloadVisualize
BU of 1g02 by Molmil
Ribonuclease T1 V16S mutant
Descriptor: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, GUANYL-SPECIFIC RIBONUCLEASE T1
Authors:De Vos, S, Loris, R, Steyaert, J.
Deposit date:2000-10-05
Release date:2000-10-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Hydrophobic core manipulations in ribonuclease T1.
Biochemistry, 40, 2001
1G9F
DownloadVisualize
BU of 1g9f by Molmil
CRYSTAL STRUCTURE OF THE SOYBEAN AGGLUTININ IN A COMPLEX WITH A BIANTENNARY BLOOD GROUP ANTIGEN ANALOG
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, LECTIN, ...
Authors:Buts, L, Hamelryck, T.W, Dao-Thi, M.-H, Loris, R, Wyns, L, Etzler, M.E.
Deposit date:2000-11-23
Release date:2001-06-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Weak protein-protein interactions in lectins: the crystal structure of a vegetative lectin from the legume Dolichos biflorus.
J.Mol.Biol., 309, 2001
1FYS
DownloadVisualize
BU of 1fys by Molmil
Ribonuclease T1 V16C mutant
Descriptor: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, GUANYL-SPECIFIC RIBONUCLEASE T1
Authors:De Vos, S, Loris, R, Steyaert, J.
Deposit date:2000-10-03
Release date:2000-10-25
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Hydrophobic core manipulations in ribonuclease T1.
Biochemistry, 40, 2001
1GNZ
DownloadVisualize
BU of 1gnz by Molmil
LECTIN I-B4 FROM GRIFFONIA SIMPLICIFOLIA (GS I-B4)METAL FREE FORM
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GSI-B4 ISOLECTIN, PHOSPHATE ION
Authors:Lescar, J, Loris, R, Mitchell, E, Gautier, C, Imberty, A.
Deposit date:2001-10-11
Release date:2001-11-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Isolectins I-A and I-B of Griffonia (Bandeiraea) Simplicifolia. Crystal Structure of Metal-Free Gs I-B(4) and Molecular Basis for Metal Binding and Monosaccharide Specificity.
J.Biol.Chem., 277, 2002

221051

數據於2024-06-12公開中

PDB statisticsPDBj update infoContact PDBjnumon