3BN4
| Carboxysome Subunit, CcmK1 | Descriptor: | Carbon dioxide-concentrating mechanism protein ccmK homolog 1, SULFATE ION | Authors: | Tanaka, S, Sawaya, M.R, Yeates, T.O. | Deposit date: | 2007-12-13 | Release date: | 2008-03-04 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Atomic-level models of the bacterial carboxysome shell. Science, 319, 2008
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2ZRQ
| Crystal structure of S324A-subtilisin | Descriptor: | CALCIUM ION, Tk-subtilisin | Authors: | Tanaka, S, Takeuchi, Y, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2008-08-28 | Release date: | 2009-03-03 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.16 Å) | Cite: | Crystal structure of Tk-subtilisin folded without propeptide: requirement of propeptide for acceleration of folding Febs Lett., 582, 2008
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5AUP
| Crystal structure of the HypAB complex | Descriptor: | ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog, ... | Authors: | Watanabe, S, Kawashima, T, Nishitani, Y, Miki, K. | Deposit date: | 2015-05-27 | Release date: | 2015-06-24 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (3.102 Å) | Cite: | Structural basis of a Ni acquisition cycle for [NiFe] hydrogenase by Ni-metallochaperone HypA and its enhancer Proc.Natl.Acad.Sci.USA, 112, 2015
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5AUN
| Crystal structure of the HypAB-Ni complex | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ATPase involved in chromosome partitioning, ParA/MinD family, ... | Authors: | Watanabe, S, Kawashima, T, Nishitani, Y, Miki, K. | Deposit date: | 2015-05-27 | Release date: | 2015-06-24 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.63 Å) | Cite: | Structural basis of a Ni acquisition cycle for [NiFe] hydrogenase by Ni-metallochaperone HypA and its enhancer Proc.Natl.Acad.Sci.USA, 112, 2015
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2Z2Z
| Crystal structure of unautoprocessed form of Tk-subtilisin soaked by 10mM CaCl2 | Descriptor: | CALCIUM ION, Tk-subtilisin precursor | Authors: | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2007-05-29 | Release date: | 2007-12-04 | Last modified: | 2024-10-09 | Method: | X-RAY DIFFRACTION (1.87 Å) | Cite: | Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation J.Mol.Biol., 372, 2007
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2D2F
| Crystal structure of atypical cytoplasmic ABC-ATPase SufC from Thermus thermophilus HB8 | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ... | Authors: | Watanabe, S, Kita, A, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2005-09-08 | Release date: | 2005-10-25 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal Structure of Atypical Cytoplasmic ABC-ATPase SufC from Thermus thermophilus HB8. J.Mol.Biol., 353, 2005
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3A3P
| Crystal structure of complex between E201A/SA-subtilisin and Tk-propeptide | Descriptor: | CALCIUM ION, Tk-subtilisin, ZINC ION | Authors: | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2009-06-15 | Release date: | 2009-08-18 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin J.Mol.Biol., 394, 2009
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2Z1E
| Crystal structure of HypE from Thermococcus kodakaraensis (outward form) | Descriptor: | Hydrogenase expression/formation protein HypE | Authors: | Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K. | Deposit date: | 2007-05-08 | Release date: | 2007-07-17 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling Mol.Cell, 27, 2007
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2Z1C
| Crystal structure of HypC from Thermococcus kodakaraensis KOD1 | Descriptor: | GLYCEROL, Hydrogenase expression/formation protein HypC, TETRAETHYLENE GLYCOL | Authors: | Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K. | Deposit date: | 2007-05-08 | Release date: | 2007-07-17 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling Mol.Cell, 27, 2007
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2Z9H
| Ethanolamine utilization protein, EutN | Descriptor: | (4R)-2-METHYLPENTANE-2,4-DIOL, CHLORIDE ION, Ethanolamine utilization protein eutN | Authors: | Tanaka, S, Sawaya, M.R, Yeates, T.O. | Deposit date: | 2007-09-20 | Release date: | 2007-10-02 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.71 Å) | Cite: | The crystal structure of ethanolamine utilization protein EutN from E. coli To be Published
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2Z1F
| Crystal structure of HypE from Thermococcus kodakaraensis (inward form) | Descriptor: | Hydrogenase expression/formation protein HypE | Authors: | Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K. | Deposit date: | 2007-05-08 | Release date: | 2007-07-17 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling Mol.Cell, 27, 2007
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2ZHH
| Crystal structure of SoxR | Descriptor: | 2,3-DIHYDROXY-1,4-DITHIOBUTANE, FE2/S2 (INORGANIC) CLUSTER, Redox-sensitive transcriptional activator soxR | Authors: | Watanabe, S, Kita, A, Kobayashi, K, Miki, K. | Deposit date: | 2008-02-05 | Release date: | 2008-03-25 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | Crystal structure of the [2Fe-2S] oxidative-stress sensor SoxR bound to DNA Proc.Natl.Acad.Sci.Usa, 105, 2008
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2J88
| Hyaluronidase in complex with a monoclonal IgG Fab fragment | Descriptor: | FAB, HYALURONONGLUCOSAMINIDASE | Authors: | Padavattan, S, Schirmer, T, Markovic-Housley, Z. | Deposit date: | 2006-10-23 | Release date: | 2007-04-03 | Last modified: | 2024-10-09 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Identification of a B-Cell Epitope of Hyaluronidase, a Major Bee Venom Allergen, from its Crystal Structure in Complex with a Specific Fab. J.Mol.Biol., 368, 2007
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3A43
| Crystal structure of HypA | Descriptor: | Hydrogenase nickel incorporation protein hypA, ZINC ION | Authors: | Watanabe, S, Arai, T, Matsumi, R, Aromi, H, Imanaka, T, Miki, K. | Deposit date: | 2009-06-30 | Release date: | 2009-10-06 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structure of HypA, a nickel-binding metallochaperone for [NiFe] hydrogenase maturation. J.Mol.Biol., 394, 2009
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5FD9
| X-ray Crystal Structure of ESCRT-III Snf7 core domain (conformation B) | Descriptor: | Vacuolar-sorting protein SNF7 | Authors: | Tang, S, Henne, W.M, Borbat, P.P, Buchkovich, N.J, Freed, J.H, Mao, Y, Fromme, J.C, Emr, S.D. | Deposit date: | 2015-12-15 | Release date: | 2015-12-30 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Structural basis for activation, assembly and membrane binding of ESCRT-III Snf7 filaments. Elife, 4, 2015
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2ZQ5
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6CYJ
| Mycobacterium tuberculosis transcriptional regulator | Descriptor: | HTH-type transcriptional regulator PrpR, IRON/SULFUR CLUSTER, SUCCINYL-COENZYME A | Authors: | Tang, S, Sacchettini, J. | Deposit date: | 2018-04-05 | Release date: | 2019-04-17 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (2.699 Å) | Cite: | Structural and functional insight into the Mycobacterium tuberculosis protein PrpR reveals a novel type of transcription factor. Nucleic Acids Res., 47, 2019
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6CZ6
| Mycobacterium tuberculosis transcriptional regulator | Descriptor: | COENZYME A, HTH-type transcriptional regulator PrpR, IRON/SULFUR CLUSTER | Authors: | Tang, S, Sacchettini, J. | Deposit date: | 2018-04-08 | Release date: | 2019-04-17 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structural and functional insight into the Mycobacterium tuberculosis protein PrpR reveals a novel type of transcription factor. Nucleic Acids Res., 47, 2019
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6D2S
| Mycobacterium tuberculosis transcriptional regulator | Descriptor: | 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ... | Authors: | Tang, S, Sacchettini, J. | Deposit date: | 2018-04-13 | Release date: | 2019-04-17 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (1.819 Å) | Cite: | Structural and functional insight into the Mycobacterium tuberculosis protein PrpR reveals a novel type of transcription factor. Nucleic Acids Res., 47, 2019
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6CYY
| Mycobacterium tuberculosis transcriptional regulator | Descriptor: | COENZYME A, HTH-type transcriptional regulator PrpR, IRON/SULFUR CLUSTER | Authors: | Tang, S, Sacchettini, J. | Deposit date: | 2018-04-07 | Release date: | 2019-04-17 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (2.506 Å) | Cite: | Structural and functional insight into the Mycobacterium tuberculosis protein PrpR reveals a novel type of transcription factor. Nucleic Acids Res., 47, 2019
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2Z1D
| Crystal structure of [NiFe] hydrogenase maturation protein, HypD from Thermococcus kodakaraensis | Descriptor: | Hydrogenase expression/formation protein hypD, IRON/SULFUR CLUSTER | Authors: | Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K. | Deposit date: | 2007-05-08 | Release date: | 2007-07-17 | Last modified: | 2024-10-09 | Method: | X-RAY DIFFRACTION (2.07 Å) | Cite: | Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling Mol.Cell, 27, 2007
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6D8I
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2PY8
| RbcX | Descriptor: | 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CHLORIDE ION, Hypothetical protein rbcX | Authors: | Tanaka, S, Sawaya, M.R, Kerfeld, C.A, Yeates, T.O. | Deposit date: | 2007-05-15 | Release date: | 2007-10-09 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.45 Å) | Cite: | Structure of the RuBisCO chaperone RbcX from Synechocystis sp. PCC6803. Acta Crystallogr.,Sect.D, 63, 2007
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5FD7
| X-ray Crystal Structure of ESCRT-III Snf7 core domain (conformation A) | Descriptor: | Vacuolar-sorting protein SNF7 | Authors: | Tang, S, Henne, W.M, Borbat, P.P, Buchkovich, N.J, Freed, J.H, Mao, Y, Fromme, J.C, Emr, S.D. | Deposit date: | 2015-12-15 | Release date: | 2015-12-30 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Structural basis for activation, assembly and membrane binding of ESCRT-III Snf7 filaments. Elife, 4, 2015
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3A44
| Crystal structure of HypA in the dimeric form | Descriptor: | Hydrogenase nickel incorporation protein hypA, ZINC ION | Authors: | Watanabe, S, Arai, T, Matsumi, R, Atomi, H, Imanaka, T, Miki, K. | Deposit date: | 2009-06-30 | Release date: | 2009-10-06 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.31 Å) | Cite: | Crystal structure of HypA, a nickel-binding metallochaperone for [NiFe] hydrogenase maturation. J.Mol.Biol., 394, 2009
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