Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7B3C
DownloadVisualize
BU of 7b3c by Molmil
Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with Remdesivir at position -4 (structure 2)
Descriptor: DNA/RNA (5'-R(P*CP*UP*AP*CP*GP*CP*A)-D(P*(RMP))-R(P*GP*UP*G)-3'), Non-structural protein 7, Non-structural protein 8, ...
Authors:Kokic, G, Hillen, H.S, Tegunov, D, Dienemann, C, Seitz, F, Schmitzova, J, Farnung, L, Siewert, A, Hoebartner, C, Cramer, P.
Deposit date:2020-11-30
Release date:2020-12-23
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Mechanism of SARS-CoV-2 polymerase stalling by remdesivir.
Nat Commun, 12, 2021
9BZ0
DownloadVisualize
BU of 9bz0 by Molmil
Structure of an STK19-containing TC-NER complex
Descriptor: DET1- and DDB1-associated protein 1, DNA (35-MER), DNA (49-MER), ...
Authors:Mevissen, T.E.T, Kuemmecke, M, Farnung, L, Walter, J.C.
Deposit date:2024-05-24
Release date:2024-12-25
Last modified:2025-01-15
Method:ELECTRON MICROSCOPY (1.9 Å)
Cite:STK19 positions TFIIH for cell-free transcription-coupled DNA repair.
Cell, 187, 2024
9EGY
DownloadVisualize
BU of 9egy by Molmil
RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-nucleosome, bp +27
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ...
Authors:Markert, J, Farnung, L.
Deposit date:2024-11-21
Release date:2024-12-18
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of H3K36 trimethylation by SETD2 during chromatin transcription.
Science, 387, 2025
9EGX
DownloadVisualize
BU of 9egx by Molmil
RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-hexasome, bp +27
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ...
Authors:Markert, J, Farnung, L.
Deposit date:2024-11-21
Release date:2024-12-18
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of H3K36 trimethylation by SETD2 during chromatin transcription.
Science, 387, 2025
9EGZ
DownloadVisualize
BU of 9egz by Molmil
RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, bp +27
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ...
Authors:Markert, J.W, Farnung, L.
Deposit date:2024-11-21
Release date:2024-12-18
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of H3K36 trimethylation by SETD2 during chromatin transcription.
Science, 387, 2025
9EH0
DownloadVisualize
BU of 9eh0 by Molmil
RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, 30 bp upstream
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ...
Authors:Markert, J, Farnung, L.
Deposit date:2024-11-21
Release date:2024-12-18
Last modified:2025-02-12
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of H3K36 trimethylation by SETD2 during chromatin transcription.
Science, 387, 2025
9EH2
DownloadVisualize
BU of 9eh2 by Molmil
RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-FACT nucleosome upstream
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ...
Authors:Markert, J, Farnung, L.
Deposit date:2024-11-21
Release date:2024-12-18
Last modified:2025-02-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of H3K36 trimethylation by SETD2 during chromatin transcription.
Science, 387, 2025
9EAR
DownloadVisualize
BU of 9ear by Molmil
CHD1-nucleosome complex (closed state)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromodomain-helicase-DNA-binding protein 1, ...
Authors:James, A.M, Farnung, L.
Deposit date:2024-11-11
Release date:2025-05-07
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of human CHD1 nucleosome recruitment and pausing.
Mol.Cell, 85, 2025
9EH1
DownloadVisualize
BU of 9eh1 by Molmil
RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, 20 bp upstream
Descriptor: DNA-directed RNA polymerase I, II, and III subunit RPABC5, ...
Authors:Markert, J, Farnung, L.
Deposit date:2024-11-21
Release date:2024-12-18
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of H3K36 trimethylation by SETD2 during chromatin transcription.
Science, 387, 2025
8P4B
DownloadVisualize
BU of 8p4b by Molmil
Structural insights into human co-transcriptional capping - structure 2
Descriptor: DNA (35-MER), DNA (5'-D(P*AP*GP*CP*GP*GP*CP*GP*GP*AP*GP*CP*CP*AP*GP*CP*AP*GP*GP*GP*AP*GP*CP*TP*G)-3'), DNA-directed RNA polymerase II subunit E, ...
Authors:Garg, G, Dienemann, C, Farnung, L, Schwarz, J, Linden, A, Urlaub, H, Cramer, P.
Deposit date:2023-05-20
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into human co-transcriptional capping.
Mol.Cell, 83, 2023
8P4C
DownloadVisualize
BU of 8p4c by Molmil
Structural insights into human co-transcriptional capping - structure 3
Descriptor: DNA (32-MER), DNA (41-MER), DNA-directed RNA polymerase II subunit E, ...
Authors:Garg, G, Dienemann, C, Farnung, L, Schwarz, J, Linden, A, Urlaub, H, Cramer, P.
Deposit date:2023-05-20
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insights into human co-transcriptional capping.
Mol.Cell, 83, 2023
8P4A
DownloadVisualize
BU of 8p4a by Molmil
Structural insights into human co-transcriptional capping - structure 1
Descriptor: DNA (29-MER), DNA (38-MER), DNA-directed RNA polymerase II subunit E, ...
Authors:Garg, G, Dienemann, C, Farnung, L, Schwarz, J, Linden, A, Urlaub, H, Cramer, P.
Deposit date:2023-05-20
Release date:2023-08-16
Last modified:2025-07-09
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insights into human co-transcriptional capping.
Mol.Cell, 83, 2023
8P4D
DownloadVisualize
BU of 8p4d by Molmil
Structural insights into human co-transcriptional capping - structure 4
Descriptor: DNA (32-MER), DNA (41-MER), DNA-directed RNA polymerase II subunit E, ...
Authors:Garg, G, Dienemann, C, Farnung, L, Schwarz, J, Linden, A, Urlaub, H, Cramer, P.
Deposit date:2023-05-20
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insights into human co-transcriptional capping.
Mol.Cell, 83, 2023
9GD0
DownloadVisualize
BU of 9gd0 by Molmil
Structure of a hexasome-nucleosome complex with a dyad-to-dyad distance of 103 bp.
Descriptor: DNA (250-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Engeholm, M, Roske, J.J, Oberbeckmann, E, Dienemann, C, Lidschreiber, M, Cramer, P, Farnung, L.
Deposit date:2024-08-04
Release date:2024-09-18
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT.
Mol.Cell, 84, 2024
9GD2
DownloadVisualize
BU of 9gd2 by Molmil
Structure of Chd1 bound to a dinucleosome with a dyad-to-dyad distance of 103 bp.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromo domain-containing protein 1, ...
Authors:Engeholm, M, Roske, J.J, Oberbeckmann, E, Dienemann, C, Lidschreiber, M, Cramer, P, Farnung, L.
Deposit date:2024-08-04
Release date:2024-09-18
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT.
Mol.Cell, 84, 2024
9GD1
DownloadVisualize
BU of 9gd1 by Molmil
Structure of Chd1 bound to a hexasome-nucleosome complex with a dyad-to-dyad distance of 103 bp.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromo domain-containing protein 1, ...
Authors:Engeholm, M, Roske, J.J, Oberbeckmann, E, Dienemann, C, Lidschreiber, M, Cramer, P, Farnung, L.
Deposit date:2024-08-04
Release date:2024-09-18
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT.
Mol.Cell, 84, 2024
9GD3
DownloadVisualize
BU of 9gd3 by Molmil
Structure of a mononucleosome bound by one copy of Chd1 with the DBD on the exit-side DNA.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromo domain-containing protein 1, ...
Authors:Engeholm, M, Roske, J.J, Oberbeckmann, E, Dienemann, C, Lidschreiber, M, Cramer, P, Farnung, L.
Deposit date:2024-08-04
Release date:2024-09-18
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT.
Mol.Cell, 84, 2024
6S01
DownloadVisualize
BU of 6s01 by Molmil
Structure of LEDGF PWWP domain bound H3K36 methylated nucleosome
Descriptor: Histone H2A, Histone H2B 1.1, Histone H3, ...
Authors:Wang, H, Farnung, L, Dienemann, C, Cramer, P.
Deposit date:2019-06-13
Release date:2019-12-18
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of H3K36-methylated nucleosome-PWWP complex reveals multivalent cross-gyre binding.
Nat.Struct.Mol.Biol., 27, 2020
6TED
DownloadVisualize
BU of 6ted by Molmil
Structure of complete, activated transcription complex Pol II-DSIF-PAF-SPT6 uncovers allosteric elongation activation by RTF1
Descriptor: DNA (37-MER), DNA-directed RNA polymerase II subunit RPB9, DNA-directed RNA polymerase subunit, ...
Authors:Vos, S.M, Farnung, L, Cramer, P.
Deposit date:2019-11-11
Release date:2020-07-22
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of complete Pol II-DSIF-PAF-SPT6 transcription complex reveals RTF1 allosteric activation.
Nat.Struct.Mol.Biol., 27, 2020
<12

 

238582

數據於2025-07-09公開中

PDB statisticsPDBj update infoContact PDBjnumon