Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1A6C
DownloadVisualize
BU of 1a6c by Molmil
STRUCTURE OF TOBACCO RINGSPOT VIRUS
Descriptor: TOBACCO RINGSPOT VIRUS CAPSID PROTEIN
Authors:Johnson, J.E, Chandrasekar, V.
Deposit date:1998-02-23
Release date:1998-07-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The structure of tobacco ringspot virus: a link in the evolution of icosahedral capsids in the picornavirus superfamily.
Structure, 6, 1998
7KH1
DownloadVisualize
BU of 7kh1 by Molmil
Baseplate Complex for Myoviridae Phage XM1
Descriptor: baseplate organization protein, gp11, baseplate stabilizing protein, ...
Authors:Wang, Z, Klose, T, Jiang, W, Kuhn, R.J.
Deposit date:2020-10-19
Release date:2021-10-27
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv, 2021
7KLN
DownloadVisualize
BU of 7kln by Molmil
Myoviridae Phage XM1 Neck Region (12-fold)
Descriptor: Head completion protein, gp1, Portal protein
Authors:Wang, Z, Klose, T, Jiang, W, Kuhn, R.J.
Deposit date:2020-10-30
Release date:2021-11-03
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv, 2021
7KJK
DownloadVisualize
BU of 7kjk by Molmil
The Neck region of Phage XM1 (6-fold symmetry)
Descriptor: Collar spike protein, Head completion protein, Tail sheath protein, ...
Authors:Wang, Z, Klose, T, Jiang, W, Kuhn, R.J.
Deposit date:2020-10-26
Release date:2021-11-03
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv, 2021
7KMX
DownloadVisualize
BU of 7kmx by Molmil
The capsid of Myoviridae Phage XM1
Descriptor: Major capsid protein, Minor capsid protein
Authors:Wang, Z, Klose, T, Jiang, W, Kuhn, R.J.
Deposit date:2020-11-03
Release date:2021-11-10
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv, 2021
7LCH
DownloadVisualize
BU of 7lch by Molmil
The mature Usutu SAAR-1776, Model B
Descriptor: (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ...
Authors:Khare, B, Klose, T, Fang, Q, Kuhn, R.
Deposit date:2021-01-11
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (2.35 Å)
Cite:Structure of Usutu virus SAAR-1776 displays fusion loop asymmetry.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LCG
DownloadVisualize
BU of 7lcg by Molmil
The mature Usutu SAAR-1776, Model A
Descriptor: (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ...
Authors:Khare, B, Klose, T, Fang, Q, Kuhn, R.
Deposit date:2021-01-11
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (2.42 Å)
Cite:Structure of Usutu virus SAAR-1776 displays fusion loop asymmetry.
Proc.Natl.Acad.Sci.USA, 118, 2021
1CF9
DownloadVisualize
BU of 1cf9 by Molmil
Structure of the mutant VAL169CYS of catalase HPII from Escherichia coli
Descriptor: PROTEIN (CATALASE HPII), PROTOPORPHYRIN IX CONTAINING FE
Authors:Mate, M.J, Loewen, P.C, Fita, I.
Deposit date:1999-03-24
Release date:1999-04-06
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mutants that alter the covalent structure of catalase hydroperoxidase II from Escherichia coli.
J.Biol.Chem., 274, 1999
5ZAP
DownloadVisualize
BU of 5zap by Molmil
Atomic structure of the herpes simplex virus type 2 B-capsid
Descriptor: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
Authors:Yuan, S, Wang, J.L, Zhu, D.J, Wang, N, Gao, Q, Chen, W.Y, Tang, H, Wang, J.Z, Zhang, X.Z, Liu, H.R, Rao, Z.H, Wang, X.X.
Deposit date:2018-02-08
Release date:2018-04-18
Last modified:2018-09-05
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structure of a herpesvirus capsid at 3.1 angstrom.
Science, 360, 2018
1ZKU
DownloadVisualize
BU of 1zku by Molmil
Fitting of the gp9 structure in the EM density of bacteriophage T4 extended tail
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Baseplate structural protein Gp9
Authors:Kostyuchenko, V.A.
Deposit date:2005-05-04
Release date:2005-08-09
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (15 Å)
Cite:The tail structure of bacteriophage T4 and its mechanism of contraction.
Nat.Struct.Mol.Biol., 12, 2005
3C6D
DownloadVisualize
BU of 3c6d by Molmil
The pseudo-atomic structure of dengue immature virus
Descriptor: Polyprotein, prM
Authors:Li, L.
Deposit date:2008-02-04
Release date:2008-04-08
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (12.5 Å)
Cite:The flavivirus precursor membrane-envelope protein complex: structure and maturation
Science, 319, 2008
3C5X
DownloadVisualize
BU of 3c5x by Molmil
Crystal structure of the precursor membrane protein- envelope protein heterodimer from the dengue 2 virus at low pH
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, beta-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]alpha-D-altropyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, L.
Deposit date:2008-02-01
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The flavivirus precursor membrane-envelope protein complex: structure and maturation.
Science, 319, 2008
3C6E
DownloadVisualize
BU of 3c6e by Molmil
Crystal structure of the precursor membrane protein- envelope protein heterodimer from the dengue 2 virus at neutral pH
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ...
Authors:Li, L.
Deposit date:2008-02-04
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The flavivirus precursor membrane-envelope protein complex: structure and maturation.
Science, 319, 2008
3I50
DownloadVisualize
BU of 3i50 by Molmil
Crystal structure of the West Nile Virus envelope glycoprotein in complex with the E53 antibody Fab
Descriptor: Envelope glycoprotein, murine heavy chain (IgG3) of E53 monoclonal antibody Fab, murine kappa light chain of E53 monoclonal antibody Fab
Authors:Nybakken, G.E, Warren, J.T, Chen, B.R, Nelson, C.A, Fremont, D.H.
Deposit date:2009-07-03
Release date:2009-10-27
Last modified:2013-09-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for the preferential recognition of immature flaviviruses by a fusion-loop antibody.
Embo J., 28, 2009
3J26
DownloadVisualize
BU of 3j26 by Molmil
The 3.5 A resolution structure of the Sputnik virophage by cryo-EM
Descriptor: Minor virion protein, capsid protein V20
Authors:Zhang, X.Z.
Deposit date:2012-09-18
Release date:2012-10-24
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of Sputnik, a virophage, at 3.5-A resolution.
Proc.Natl.Acad.Sci.USA, 109, 2012
3GK8
DownloadVisualize
BU of 3gk8 by Molmil
X-ray crystal structure of the Fab from MAb 14, mouse antibody against Canine Parvovirus
Descriptor: Fab 14 Heavy Chain, Fab 14 Light Chain
Authors:Hafenstein, S, Bowman, V, Sun, T, Nelson, C, Palermo, L, Chipman, P, Battisti, A, Parrish, C.
Deposit date:2009-03-10
Release date:2009-06-16
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural comparison of different antibodies interacting with parvovirus capsids.
J.Virol., 83, 2009
1C47
DownloadVisualize
BU of 1c47 by Molmil
BINDING DRIVEN STRUCTURAL CHANGES IN CRYSTALINE PHOSPHOGLUCOMUTASE ASSOCIATED WITH CHEMICAL REACTION
Descriptor: 1,6-di-O-phosphono-alpha-D-glucopyranose, ALPHA-D-GLUCOSE 1,6-BISPHOSPHATE PHOSPHOTRANSFERASE, CADMIUM ION
Authors:Baranidharan, S, Ray Jr, W.J.
Deposit date:1999-08-11
Release date:1999-08-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Binding Driven Structural Changes in Crystaline Phosphoglucomutase Associated with Chemical Reaction
To be Published
1C4G
DownloadVisualize
BU of 1c4g by Molmil
PHOSPHOGLUCOMUTASE VANADATE BASED TRANSITION STATE ANALOG COMPLEX
Descriptor: ALPHA-D-GLUCOSE-1-PHOSPHATE-6-VANADATE, COBALT (II) ION, PROTEIN (ALPHA-D-GLUCOSE 1-PHOSPHATE PHOSPHOGLUCOMUTASE)
Authors:Baranidharan, S, Ray Jr, W.J.
Deposit date:1999-08-24
Release date:1999-08-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Relationships at the Active Site of Phos in Analog Complexes
To be Published
3PMG
DownloadVisualize
BU of 3pmg by Molmil
STRUCTURE OF RABBIT MUSCLE PHOSPHOGLUCOMUTASE AT 2.4 ANGSTROMS RESOLUTION. USE OF FREEZING POINT DEPRESSANT AND REDUCED TEMPERATURE TO ENHANCE DIFFRACTIVITY
Descriptor: MAGNESIUM ION, Phosphoglucomutase-1
Authors:Ray Junior, W.J, Liu, Y, Baranidharan, S.
Deposit date:1995-03-02
Release date:1995-12-07
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of rabbit muscle phosphoglucomutase refined at 2.4 A resolution.
Acta Crystallogr.,Sect.D, 53, 1997
2XFB
DownloadVisualize
BU of 2xfb by Molmil
CHIKUNGUNYA E1 E2 ENVELOPE GLYCOPROTEINS FITTED IN SINDBIS VIRUS cryo- EM MAP
Descriptor: E1 ENVELOPE GLYCOPROTEIN, E2 ENVELOPE GLYCOPROTEIN
Authors:Voss, J.E, Vaney, M.C, Duquerroy, S, Rey, F.A.
Deposit date:2010-05-21
Release date:2010-11-24
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Glycoprotein Organization of Chikungunya Virus Particles Revealed by X-Ray Crystallography
Nature, 468, 2010
1E93
DownloadVisualize
BU of 1e93 by Molmil
High resolution structure and biochemical properties of a recombinant catalase depleted in iron
Descriptor: ACETATE ION, CATALASE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Andreoletti, P, Sainz, G, Jaquinod, M, Gagnon, J, Jouve, H.M.
Deposit date:2000-10-05
Release date:2000-10-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-Resolution Structure and Biochemical Properties of a Recombinant Proteus Mirabilis Catalase Depleted in Iron.
Proteins: Struct.,Funct., Genet., 50, 2003
1H7K
DownloadVisualize
BU of 1h7k by Molmil
Formation of a tyrosyl radical intermediate in Proteus mirabilis catalase by directed mutagenesis and consequences for nucleotide reactivity
Descriptor: ACETATE ION, CATALASE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Andreoletti, P, Gambarelli, S, Gaillard, J, Sainz, G, Stojanoff, V, Jouve, H.M.
Deposit date:2001-07-08
Release date:2004-02-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Formation of a Tyrosyl Radical Intermediate in Proteus Mirabilis Catalase by Directed Mutagenesis and Consequences for Nucleotide Reactivity.
Biochemistry, 40, 2001
1H6N
DownloadVisualize
BU of 1h6n by Molmil
Formation of a tyrosyl radical intermediate in Proteus mirabilis catalase by directed mutagenesis and consequences for nucleotide reactivity
Descriptor: ACETATE ION, CATALASE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Andreoletti, P, Sainz, G, Jaquinod, M, Gagnon, J, Jouve, H.M.
Deposit date:2001-06-20
Release date:2003-10-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:High Resolution Structure and Biochemical Properties of a Recombinant Proteus Mirabilis Catalase Depleted in Iron.
Proteins: Struct.,Funct., Genet., 50, 2003
2CAG
DownloadVisualize
BU of 2cag by Molmil
CATALASE COMPOUND II
Descriptor: CATALASE COMPOUND II, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gouet, P, Jouve, H.M, Hajdu, J.
Deposit date:1996-06-12
Release date:1996-12-07
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Ferryl intermediates of catalase captured by time-resolved Weissenberg crystallography and UV-VIS spectroscopy.
Nat.Struct.Biol., 3, 1996
2CAH
DownloadVisualize
BU of 2cah by Molmil
STRUCTURE OF PROTEUS MIRABILIS PR CATALASE FOR THE NATIVE FORM (E-FE(III)) COMPLEXED WITH NADPH
Descriptor: CATALASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gouet, P, Jouve, H.-M, Dideberg, O.
Deposit date:1996-07-01
Release date:1997-01-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of Proteus mirabilis PR catalase with and without bound NADPH.
J.Mol.Biol., 249, 1995

220760

數據於2024-06-05公開中

PDB statisticsPDBj update infoContact PDBjnumon