3V39
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![BU of 3v39 by Molmil](/molmil-images/mine/3v39) | Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus | Descriptor: | 2-AMINOETHANESULFONIC ACID, D-alanyl-D-alanine carboxypeptidase, SULFATE ION, ... | Authors: | Lovering, A.L, Lerner, T.R, Sockett, R.E. | Deposit date: | 2011-12-13 | Release date: | 2012-02-22 | Last modified: | 2012-04-11 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Specialized peptidoglycan hydrolases sculpt the intra-bacterial niche of predatory Bdellovibrio and increase population fitness. Plos Pathog., 8, 2012
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5JP6
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![BU of 5jp6 by Molmil](/molmil-images/mine/5jp6) | Bdellovibrio bacteriovorus peptidoglycan deacetylase Bd3279 | Descriptor: | MAGNESIUM ION, Putative polysaccharide deacetylase, ZINC ION | Authors: | Lovering, A.L. | Deposit date: | 2016-05-03 | Release date: | 2016-06-01 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Interrupting peptidoglycan deacetylation during Bdellovibrio predator-prey interaction prevents ultimate destruction of prey wall, liberating bacterial-ghosts. Sci Rep, 6, 2016
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6TAD
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![BU of 6tad by Molmil](/molmil-images/mine/6tad) | Bd0314 DslA E143Q mutant | Descriptor: | SLT domain-containing protein | Authors: | Lovering, A.L, Harding, C.J. | Deposit date: | 2019-10-29 | Release date: | 2020-07-15 | Last modified: | 2020-10-07 | Method: | X-RAY DIFFRACTION (1.822 Å) | Cite: | A lysozyme with altered substrate specificity facilitates prey cell exit by the periplasmic predator Bdellovibrio bacteriovorus. Nat Commun, 11, 2020
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6TAF
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![BU of 6taf by Molmil](/molmil-images/mine/6taf) | Bd0314 DslA E154Q mutant | Descriptor: | ACETATE ION, SLT domain-containing protein, SULFATE ION | Authors: | Lovering, A.L, Harding, C.J. | Deposit date: | 2019-10-29 | Release date: | 2020-07-15 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (1.336 Å) | Cite: | A lysozyme with altered substrate specificity facilitates prey cell exit by the periplasmic predator Bdellovibrio bacteriovorus. Nat Commun, 11, 2020
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6TA9
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![BU of 6ta9 by Molmil](/molmil-images/mine/6ta9) | Bd0314 DslA wild-type form 1 | Descriptor: | SLT domain-containing protein, SULFATE ION | Authors: | Lovering, A.L, Harding, C.J. | Deposit date: | 2019-10-29 | Release date: | 2020-07-15 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (1.361 Å) | Cite: | A lysozyme with altered substrate specificity facilitates prey cell exit by the periplasmic predator Bdellovibrio bacteriovorus. Nat Commun, 11, 2020
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6TAB
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![BU of 6tab by Molmil](/molmil-images/mine/6tab) | Bd0314 DslA wild-type form 2 | Descriptor: | SLT domain-containing protein, SULFATE ION | Authors: | Lovering, A.L, Harding, C.J. | Deposit date: | 2019-10-29 | Release date: | 2020-07-15 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (1.26 Å) | Cite: | A lysozyme with altered substrate specificity facilitates prey cell exit by the periplasmic predator Bdellovibrio bacteriovorus. Nat Commun, 11, 2020
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4NX8
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![BU of 4nx8 by Molmil](/molmil-images/mine/4nx8) | Structure of a PTP-like phytase from Bdellovibrio bacteriovorus | Descriptor: | GLYCEROL, MAGNESIUM ION, Protein-tyrosine phosphatase 2 | Authors: | Gruninger, R.J, Lovering, A.L. | Deposit date: | 2013-12-08 | Release date: | 2014-07-23 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.698 Å) | Cite: | Structural and biochemical analysis of a unique phosphatase from Bdellovibrio bacteriovorus reveals its structural and functional relationship with the protein tyrosine phosphatase class of phytase. Plos One, 9, 2014
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7O21
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![BU of 7o21 by Molmil](/molmil-images/mine/7o21) | |
8FW7
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![BU of 8fw7 by Molmil](/molmil-images/mine/8fw7) | Histone from Bdellovibrio bacteriovorus bound to dsDNA | Descriptor: | CBFD_NFYB_HMF domain-containing protein, DNA (5'-D(P*AP*T)-3'), DNA (5'-D(P*CP*AP*T)-3') | Authors: | Laursen, S.P, Luger, K. | Deposit date: | 2023-01-20 | Release date: | 2023-08-30 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Histones with an unconventional DNA-binding mode in vitro are major chromatin constituents in the bacterium Bdellovibrio bacteriovorus. Nat Microbiol, 8, 2023
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8FVX
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![BU of 8fvx by Molmil](/molmil-images/mine/8fvx) | Histone from Bdellovibrio bacteriovorus | Descriptor: | CBFD_NFYB_HMF domain-containing protein | Authors: | Laursen, S.P, Luger, K. | Deposit date: | 2023-01-19 | Release date: | 2023-08-30 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Histones with an unconventional DNA-binding mode in vitro are major chromatin constituents in the bacterium Bdellovibrio bacteriovorus. Nat Microbiol, 8, 2023
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5CEA
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![BU of 5cea by Molmil](/molmil-images/mine/5cea) | |
5CED
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![BU of 5ced by Molmil](/molmil-images/mine/5ced) | Penicillin G Acylated Bd3459 Predatory Endopeptidase from Bdellovibrio bacteriovorus in complex with immunity protein Bd3460 | Descriptor: | Bd3459, Bd3460, OPEN FORM - PENICILLIN G | Authors: | Lovering, A.L, Cadby, I.T, Lambert, C, Sockett, R.E. | Deposit date: | 2015-07-06 | Release date: | 2015-12-09 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.02 Å) | Cite: | Ankyrin-mediated self-protection during cell invasion by the bacterial predator Bdellovibrio bacteriovorus. Nat Commun, 6, 2015
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5CER
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![BU of 5cer by Molmil](/molmil-images/mine/5cer) | Bd0816 Predatory Endopeptidase from Bdellovibrio bacteriovorus in complex with immunity protein Bd3460 | Descriptor: | 1,2-ETHANEDIOL, Bd0816, Bd3460 | Authors: | Lovering, A.L, Cadby, I.T, Lambert, C, Sockett, R.E. | Deposit date: | 2015-07-07 | Release date: | 2015-12-09 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.48 Å) | Cite: | Ankyrin-mediated self-protection during cell invasion by the bacterial predator Bdellovibrio bacteriovorus. Nat Commun, 6, 2015
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5CEC
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![BU of 5cec by Molmil](/molmil-images/mine/5cec) | Bd3459 Predatory Endopeptidase from Bdellovibrio bacteriovorus in complex with immunity protein Bd3460 | Descriptor: | Bd3459, Bd3460, SULFATE ION | Authors: | Lovering, A.L, Cadby, I.T, Lambert, C, Sockett, R.E. | Deposit date: | 2015-07-06 | Release date: | 2015-12-09 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.36 Å) | Cite: | Ankyrin-mediated self-protection during cell invasion by the bacterial predator Bdellovibrio bacteriovorus. Nat Commun, 6, 2015
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5CEB
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![BU of 5ceb by Molmil](/molmil-images/mine/5ceb) | Bd3459 Predatory Endopeptidase from Bdellovibrio bacteriovorus, K38M form | Descriptor: | Bd3459 | Authors: | Lovering, A.L, Cadby, I.T, Lambert, C, Sockett, R.E. | Deposit date: | 2015-07-06 | Release date: | 2015-12-09 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.93 Å) | Cite: | Ankyrin-mediated self-protection during cell invasion by the bacterial predator Bdellovibrio bacteriovorus. Nat Commun, 6, 2015
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6HQ3
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![BU of 6hq3 by Molmil](/molmil-images/mine/6hq3) | |
6HQ4
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![BU of 6hq4 by Molmil](/molmil-images/mine/6hq4) | Structure of EAL enzyme Bd1971 - cAMP bound form | Descriptor: | ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, EAL Enzyme Bd1971, MAGNESIUM ION | Authors: | Lovering, A.L, Cadby, I.T. | Deposit date: | 2018-09-24 | Release date: | 2019-07-31 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (2.63 Å) | Cite: | Nucleotide signaling pathway convergence in a cAMP-sensing bacterial c-di-GMP phosphodiesterase. Embo J., 38, 2019
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3TMD
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![BU of 3tmd by Molmil](/molmil-images/mine/3tmd) | Bd1817, a HDG"Y"P protein from Bdellovibrio bacteriovorus | Descriptor: | FE (III) ION, PHOSPHATE ION, Uncharacterized protein | Authors: | Lovering, A.L. | Deposit date: | 2011-08-31 | Release date: | 2011-10-19 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.641 Å) | Cite: | The structure of an unconventional HD-GYP protein from Bdellovibrio reveals the roles of conserved residues in this class of cyclic-di-GMP phosphodiesterases. MBio, 2, 2011
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3TMC
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![BU of 3tmc by Molmil](/molmil-images/mine/3tmc) | Bd1817, a HDG"Y"P protein from Bdellovibrio bacteriovorus | Descriptor: | DIMETHYL SULFOXIDE, FE (III) ION, PHOSPHATE ION, ... | Authors: | Lovering, A.L. | Deposit date: | 2011-08-31 | Release date: | 2011-10-19 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | The structure of an unconventional HD-GYP protein from Bdellovibrio reveals the roles of conserved residues in this class of cyclic-di-GMP phosphodiesterases. MBio, 2, 2011
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6HQ5
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![BU of 6hq5 by Molmil](/molmil-images/mine/6hq5) | Structure of EAL Enzyme Bd1971 - cAMP and cyclic-di-GMP bound form | Descriptor: | 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CALCIUM ION, ... | Authors: | Lovering, A.L, Cadby, I.T. | Deposit date: | 2018-09-24 | Release date: | 2019-07-31 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (2.83 Å) | Cite: | Nucleotide signaling pathway convergence in a cAMP-sensing bacterial c-di-GMP phosphodiesterase. Embo J., 38, 2019
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6HQ2
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![BU of 6hq2 by Molmil](/molmil-images/mine/6hq2) | Structure of EAL Enzyme Bd1971 - apo form | Descriptor: | EAL Enzyme Bd1971 | Authors: | Lovering, A.L, Cadby, I.T. | Deposit date: | 2018-09-24 | Release date: | 2019-07-31 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (2.45 Å) | Cite: | Nucleotide signaling pathway convergence in a cAMP-sensing bacterial c-di-GMP phosphodiesterase. Embo J., 38, 2019
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6HQ7
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![BU of 6hq7 by Molmil](/molmil-images/mine/6hq7) | Structure of EAL Enzyme Bd1971 - cGMP bound form | Descriptor: | CYCLIC GUANOSINE MONOPHOSPHATE, EAL Enzyme Bd1971, MAGNESIUM ION | Authors: | Lovering, A.L, Cadby, I.T. | Deposit date: | 2018-09-24 | Release date: | 2019-07-31 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (2.46 Å) | Cite: | Nucleotide signaling pathway convergence in a cAMP-sensing bacterial c-di-GMP phosphodiesterase. Embo J., 38, 2019
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3TMB
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![BU of 3tmb by Molmil](/molmil-images/mine/3tmb) | Bd1817, a HDG"Y"P protein from Bdellovibrio bacteriovorus | Descriptor: | FE (III) ION, PHOSPHATE ION, Uncharacterized protein Bd1817 | Authors: | Lovering, A.L. | Deposit date: | 2011-08-31 | Release date: | 2011-10-19 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | The structure of an unconventional HD-GYP protein from Bdellovibrio reveals the roles of conserved residues in this class of cyclic-di-GMP phosphodiesterases. MBio, 2, 2011
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3TM8
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![BU of 3tm8 by Molmil](/molmil-images/mine/3tm8) | Bd1817, a HDG"Y"P protein from Bdellovibrio bacteriovorus | Descriptor: | 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, FE (III) ION, ... | Authors: | Lovering, A.L. | Deposit date: | 2011-08-31 | Release date: | 2011-10-19 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.28 Å) | Cite: | The structure of an unconventional HD-GYP protein from Bdellovibrio reveals the roles of conserved residues in this class of cyclic-di-GMP phosphodiesterases. MBio, 2, 2011
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8OJN
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![BU of 8ojn by Molmil](/molmil-images/mine/8ojn) | |