1IZC
| Crystal Structure Analysis of Macrophomate synthase | Descriptor: | MAGNESIUM ION, PYRUVIC ACID, macrophomate synthase intermolecular Diels-Alderase | Authors: | Ose, T, Watanabe, K, Mie, T, Honma, M, Watanabe, H, Yao, M, Oikawa, H, Tanaka, I. | Deposit date: | 2002-10-01 | Release date: | 2003-04-01 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Insight into a natural Diels-Alder reaction from the structure of macrophomate synthase. Nature, 422, 2003
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1LZG
| DISSECTION OF PROTEIN-CARBOHYDRATE INTERACTIONS IN MUTANT HEN EGG-WHITE LYSOZYME COMPLEXES AND THEIR HYDROLYTIC ACTIVITY | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HEN EGG WHITE LYSOZYME | Authors: | Maenaka, K, Matsushima, M, Song, H, Watanabe, K, Kumagai, I. | Deposit date: | 1995-02-10 | Release date: | 1995-05-08 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Dissection of protein-carbohydrate interactions in mutant hen egg-white lysozyme complexes and their hydrolytic activity. J.Mol.Biol., 247, 1995
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6F97
| Crystal structure of the V465T mutant of 5-(Hydroxymethyl)furfural Oxidase (HMFO) | Descriptor: | 5-(hydroxymethyl)furfural oxidase, FLAVIN-ADENINE DINUCLEOTIDE | Authors: | Pickl, M, Swoboda, A, Romero, E, Winkler, C.K, Binda, C, Mattevi, A, Faber, K, Fraaije, M.W. | Deposit date: | 2017-12-14 | Release date: | 2018-02-14 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Kinetic Resolution of sec-Thiols by Enantioselective Oxidation with Rationally Engineered 5-(Hydroxymethyl)furfural Oxidase. Angew. Chem. Int. Ed. Engl., 57, 2018
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3W3D
| Crystal structure of smooth muscle G actin DNase I complex | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, Actin, gamma-enteric smooth muscle, ... | Authors: | Sakabe, N, Sakabe, K, Sasaki, K, Kondo, H, Shimomur, M. | Deposit date: | 2012-12-20 | Release date: | 2013-01-30 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Refined structure and solvent network of chicken gizzard G-actin DNase 1 complex at 1.8A resolution Acta Crystallogr.,Sect.A, 49, 1993
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4PDT
| Japanese Marasmius oreades lectin | Descriptor: | Mannose recognizing lectin, SULFATE ION | Authors: | Noma, Y, Shimokawa, M, Maeganeku, C, Motoshima, H, Watanabe, K, Minami, Y, Yagi, F. | Deposit date: | 2014-04-22 | Release date: | 2015-04-29 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | The structure of Japanese Marasmius oreades lectin at 1.40 Angstroms resolution. To Be Published
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4TKC
| Japanese Marasmius oreades lectin complexed with mannose | Descriptor: | GLYCEROL, Mannose recognizing lectin, alpha-D-mannopyranose, ... | Authors: | Noma, Y, Shimokawa, M, Maeganeku, C, Motoshima, H, Watanabe, K, Minami, Y, Yagi, F. | Deposit date: | 2014-05-26 | Release date: | 2015-06-03 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.29 Å) | Cite: | Structure of Japanese Marasmius oreades lectin complexed with mannose. To Be Published
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2HCJ
| Trypsin-modified Elongation Factor Tu in complex with tetracycline | Descriptor: | GLYOXYLIC ACID, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Mui, S, Heffron, S.E, Aorora, A, Abel, K, Bergmann, E, Jurnak, F. | Deposit date: | 2006-06-16 | Release date: | 2006-10-31 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.12 Å) | Cite: | Molecular complementarity between tetracycline and the GTPase active site of elongation factor Tu. Acta Crystallogr.,Sect.D, 62, 2006
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2HDN
| Trypsin-modified Elongation Factor Tu in complex with tetracycline at 2.8 Angstrom resolution | Descriptor: | Elongation factor EF-Tu, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Mui, S, Heffron, S.E, Aorora, A, Abel, K, Bergmann, E, Jurnak, F. | Deposit date: | 2006-06-20 | Release date: | 2006-10-31 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Molecular complementarity between tetracycline and the GTPase active site of elongation factor Tu. Acta Crystallogr.,Sect.D, 62, 2006
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1UE3
| Crystal structure of d(GCGAAAGC) containing hexaamminecobalt | Descriptor: | 5'-D(*GP*CP*GP*AP*AP*AP*GP*C)-3', CHLORIDE ION, COBALT HEXAMMINE(III), ... | Authors: | Sunami, T, Kondo, J, Hirao, I, Watanabe, K, Miura, K, Takenaka, A. | Deposit date: | 2003-05-08 | Release date: | 2004-01-13 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Structure of d(GCGAAAGC) (hexagonal form): a base-intercalated duplex as a stable structure. Acta Crystallogr.,Sect.D, 60, 2004
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4AV7
| Structure determination of the double mutant S233Y F250G from the sec- alkyl sulfatase PisA1 | Descriptor: | SEC-ALKYLSULFATASE, SULFATE ION, ZINC ION | Authors: | Knaus, T, Schober, M, Faber, K, Macharaux, P, Wagner, U. | Deposit date: | 2012-05-24 | Release date: | 2012-12-05 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Structure and Mechanism of an Inverting Alkylsulfatase from Pseudomonas Sp. Dsm6611 Specific for Secondary Alkylsulfates. FEBS J., 279, 2012
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3EC5
| The crystal structure of Thioflavin-T (ThT) binding OspA mutant | Descriptor: | Outer Surface Protein A, TETRAETHYLENE GLYCOL | Authors: | Biancalana, M, Makabe, K, Koide, A, Koide, S. | Deposit date: | 2008-08-28 | Release date: | 2009-02-03 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Molecular mechanism of thioflavin-T binding to the surface of beta-rich peptide self-assemblies J.Mol.Biol., 385, 2009
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4AXH
| Structure and mechanism of the first inverting alkylsulfatase specific for secondary alkylsulfatases | Descriptor: | SEC-ALKYLSULFATASE, SULFATE ION, ZINC ION | Authors: | Knaus, T, Schober, M, Faber, K, Macheroux, P, Wagner, U.G. | Deposit date: | 2012-06-13 | Release date: | 2012-12-05 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structure and Mechanism of an Inverting Alkylsulfatase from Pseudomonas Sp. Dsm6611 Specific for Secondary Alkylsulfates. FEBS J., 279, 2012
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5ZRU
| Crystal structure of Agl-KA catalytic domain | Descriptor: | 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, Alpha-1,3-glucanase, CALCIUM ION, ... | Authors: | Yano, S, Makabe, K. | Deposit date: | 2018-04-25 | Release date: | 2019-10-23 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.833 Å) | Cite: | Crystal structure of the catalytic unit of GH 87-type alpha-1,3-glucanase Agl-KA from Bacillus circulans. Sci Rep, 9, 2019
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1WVM
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6AIS
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1Y9Z
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2PI3
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1Z9H
| Microsomal prostaglandin E synthase type-2 | Descriptor: | ACETATE ION, CHLORIDE ION, INDOMETHACIN, ... | Authors: | Yamada, T, Komoto, J, Watanabe, K, Ohmiya, Y, Takusagawa, F. | Deposit date: | 2005-04-02 | Release date: | 2005-05-17 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Crystal Structure and Possible Catalytic Mechanism of Microsomal Prostaglandin E Synthase Type 2 (mPGES-2). J.Mol.Biol., 348, 2005
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2QBW
| The crystal structure of PDZ-Fibronectin fusion protein | Descriptor: | PDZ-Fibronectin fusion protein, Polypeptide | Authors: | Huang, J, Makabe, K, Koide, A, Koide, S. | Deposit date: | 2007-06-18 | Release date: | 2008-04-22 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Design of protein function leaps by directed domain interface evolution. Proc.Natl.Acad.Sci.Usa, 105, 2008
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6IEI
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6IYS
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7FAO
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6ICS
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6IDC
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7FJR
| Structure of a mutant of OspA | Descriptor: | DI(HYDROXYETHYL)ETHER, Outer surface protein A | Authors: | Shiga, S, Makabe, K. | Deposit date: | 2021-08-04 | Release date: | 2022-08-10 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | beta-Strand-mediated Domain-swapping in the Absence of Hydrophobic Core Repacking. J.Mol.Biol., 436, 2024
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