Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5V5X
DownloadVisualize
BU of 5v5x by Molmil
Protocadherin gammaB7 EC3-6 cis-dimer structure
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Goodman, K.M, Mannepalli, S, Bahna, F, Honig, B, Shapiro, L.
Deposit date:2017-03-15
Release date:2017-11-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Protocadherin cis-dimer architecture and recognition unit diversity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1PQY
DownloadVisualize
BU of 1pqy by Molmil
Crystal structure of formyl-coA transferase yfdW from E. coli
Descriptor: Hypothetical protein yfdW
Authors:Gogos, A, Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-06-19
Release date:2003-09-30
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of Escherichia coli YfdW, a type III CoA transferase.
Acta Crystallogr.,Sect.D, 60, 2004
1M0W
DownloadVisualize
BU of 1m0w by Molmil
Yeast Glutathione Synthase Bound to gamma-glutamyl-cysteine, AMP-PNP and 2 Magnesium Ions
Descriptor: GAMMA-GLUTAMYLCYSTEINE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Gogos, A, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2002-06-14
Release date:2002-12-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Large Conformational Changes in the Catalytic Cycle of Glutathione Synthase
Structure, 10, 2002
1T5J
DownloadVisualize
BU of 1t5j by Molmil
Crystal structure of ribosylglycohydrolase MJ1187 from Methanococcus jannaschii
Descriptor: Hypothetical protein MJ1187, MAGNESIUM ION
Authors:Gogos, A, Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-05-04
Release date:2004-05-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of Hypothetical protein MJ1187 from Methanococcus jannaschii
To be Published
1Q6Y
DownloadVisualize
BU of 1q6y by Molmil
Hypothetical protein YfdW from E. coli bound to Coenzyme A
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, COENZYME A, Hypothetical protein yfdW
Authors:Gogos, A, Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-08-14
Release date:2003-09-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structure of Escherichia coli YfdW, a type III CoA transferase.
Acta Crystallogr.,Sect.D, 60, 2004
6CV7
DownloadVisualize
BU of 6cv7 by Molmil
Mouse Protocadherin-15 Extracellular Cadherin Domains 1 through 3
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Dionne, G, Shapiro, L.
Deposit date:2018-03-27
Release date:2018-08-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.692 Å)
Cite:Mechanotransduction by PCDH15 Relies on a Novel cis-Dimeric Architecture.
Neuron, 99, 2018
6CG6
DownloadVisualize
BU of 6cg6 by Molmil
mouse cadherin-10 EC1-2 adhesive fragment
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Cadherin-10, ...
Authors:Brasch, J, Harrison, O.J, Shapiro, L.
Deposit date:2018-02-19
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.707 Å)
Cite:Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
Cell Rep, 23, 2018
6CGU
DownloadVisualize
BU of 6cgu by Molmil
mouse cadherin-6 EC1-2 adhesive fragment
Descriptor: CALCIUM ION, Cadherin-6
Authors:Brasch, J, Harrison, O.J, Shapiro, L.
Deposit date:2018-02-20
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
Cell Rep, 23, 2018
8VI8
DownloadVisualize
BU of 8vi8 by Molmil
Engineered glutamine binding protein and a cobaloxime ligand - no GLN bound
Descriptor: AZIDOBIS (DIMETHYLGLYOXIMATO) PYRIDINECOBALT, Amino acid ABC transporter substrate-binding protein, SODIUM ION, ...
Authors:Boggs, D.G, Fatima, S, Olshansky, L, Bridwell-Rabb, J.
Deposit date:2024-01-03
Release date:2024-09-04
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Conformation-Dependent Hydrogen-Bonding Interactions in a Switchable Artificial Metalloprotein.
Biochemistry, 63, 2024
6CGB
DownloadVisualize
BU of 6cgb by Molmil
chimera of mouse cadherin-11 EC1 and mouse cadherin-6 EC2
Descriptor: ACETATE ION, CALCIUM ION, Cadherin-11, ...
Authors:Brasch, J, Harrison, O.J, Shapiro, L, Kaeser, B.
Deposit date:2018-02-19
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.994 Å)
Cite:Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
Cell Rep, 23, 2018
5DZX
DownloadVisualize
BU of 5dzx by Molmil
Protocadherin beta 6 extracellular cadherin domains 1-4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Protocadherin beta 6, ...
Authors:Goodman, K.M, Mannepalli, S, Bahna, F, Honig, B, Shapiro, L.
Deposit date:2015-09-26
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.879 Å)
Cite:Structural Basis of Diverse Homophilic Recognition by Clustered alpha- and beta-Protocadherins.
Neuron, 90, 2016
5DZW
DownloadVisualize
BU of 5dzw by Molmil
Protocadherin alpha 4 extracellular cadherin domains 1-4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Protocadherin alpha-4, ...
Authors:Goodman, K.M, Bahna, F, Mannepalli, S, Honig, B, Shapiro, L.
Deposit date:2015-09-26
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural Basis of Diverse Homophilic Recognition by Clustered alpha- and beta-Protocadherins.
Neuron, 90, 2016
7TTM
DownloadVisualize
BU of 7ttm by Molmil
Crystal structure of potent neutralizing antibody 10-40 in complex with Sarbecovirus bat SHC014 receptor-binding domain
Descriptor: 1040 heavy chain, 1040 light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Reddem, E.R, Shapiro, L.
Deposit date:2022-02-01
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:An antibody class with a common CDRH3 motif broadly neutralizes sarbecoviruses.
Sci Transl Med, 14, 2022
7TTX
DownloadVisualize
BU of 7ttx by Molmil
Crystal structure of potent neutralizing antibody 10-40 in complex with Sarbecovirus bat RaTG13 receptor-binding domain
Descriptor: 1040 heavy chain, 1040 light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Reddem, E.R, Shapiro, L.
Deposit date:2022-02-02
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:An antibody class with a common CDRH3 motif broadly neutralizes sarbecoviruses.
Sci Transl Med, 14, 2022
6BIT
DownloadVisualize
BU of 6bit by Molmil
SIRPalpha antibody complex
Descriptor: KWAR23 Fab heavy chain, KWAR23 Fab light chain, Tyrosine-protein phosphatase non-receptor type substrate 1
Authors:Ring, N.G, Herndler-Brandstetter, D, Weiskopf, K, Shan, L, Volkmer, J.P, George, B.M, Lietzenmayer, M, McKenna, K.M, Naik, T.J, McCarty, A, Zheng, Y, Ring, A.M, Flavell, R.A, Weissman, I.L.
Deposit date:2017-11-03
Release date:2017-12-06
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.191 Å)
Cite:Anti-SIRP alpha antibody immunotherapy enhances neutrophil and macrophage antitumor activity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6CG7
DownloadVisualize
BU of 6cg7 by Molmil
mouse cadherin-22 EC1-2 adhesive fragment
Descriptor: CALCIUM ION, Cadherin-22
Authors:Brasch, J, Harrison, O.J, Shapiro, L.
Deposit date:2018-02-19
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.705 Å)
Cite:Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
Cell Rep, 23, 2018
6CGS
DownloadVisualize
BU of 6cgs by Molmil
mouse cadherin-7 EC1-2 adhesive fragment
Descriptor: CALCIUM ION, Cadherin-7, GLYCEROL
Authors:Brasch, J, Harrison, O.J, Kaczynska, A, Shapiro, L.
Deposit date:2018-02-20
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
Cell Rep, 23, 2018
9B1V
DownloadVisualize
BU of 9b1v by Molmil
Crystal structure of PqqT with PQQ and Gd3+ bound
Descriptor: 1,2-ETHANEDIOL, GADOLINIUM ION, PYRROLOQUINOLINE QUINONE, ...
Authors:Boggs, G.D, Bruchs, A.T, Thompson, P.J, Olshansky, L, Bridwell-Rabb, J.
Deposit date:2024-03-13
Release date:2024-08-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure-driven development of a biomimetic rare earth artificial metalloprotein.
Proc.Natl.Acad.Sci.USA, 121, 2024
5ERP
DownloadVisualize
BU of 5erp by Molmil
Crystal structure of human Desmocollin-2 ectodomain fragment EC2-5
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Harrison, O.J, Brasch, J, Shapiro, L.
Deposit date:2015-11-14
Release date:2016-06-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of adhesive binding by desmocollins and desmogleins.
Proc.Natl.Acad.Sci.USA, 113, 2016
9B1U
DownloadVisualize
BU of 9b1u by Molmil
Crystal structure of PqqT with PQQ bound
Descriptor: PYRROLOQUINOLINE QUINONE, Putative ABC transporter periplasmic solute-binding protein, SODIUM ION
Authors:Boggs, D, Bruchs, A, Thompson, P, Olshansky, L, Bridwell-Rabb, J.
Deposit date:2024-03-13
Release date:2024-08-21
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structure-driven development of a biomimetic rare earth artificial metalloprotein.
Proc.Natl.Acad.Sci.USA, 121, 2024
5DZY
DownloadVisualize
BU of 5dzy by Molmil
Protocadherin beta 8 extracellular cadherin domains 1-4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Pcdhb8 protein, ...
Authors:Goodman, K.M, Bahna, F, Mannepalli, S, Honig, B, Shapiro, L.
Deposit date:2015-09-26
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Basis of Diverse Homophilic Recognition by Clustered alpha- and beta-Protocadherins.
Neuron, 90, 2016
5ERD
DownloadVisualize
BU of 5erd by Molmil
Crystal structure of human Desmoglein-2 ectodomain
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Brasch, J, Harrison, O.J, Shapiro, L.
Deposit date:2015-11-13
Release date:2016-06-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of adhesive binding by desmocollins and desmogleins.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EQX
DownloadVisualize
BU of 5eqx by Molmil
Crystal structure of human Desmoglein-3 ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Harrison, O.J, Brasch, J, Shapiro, L.
Deposit date:2015-11-13
Release date:2016-06-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural basis of adhesive binding by desmocollins and desmogleins.
Proc.Natl.Acad.Sci.USA, 113, 2016
5DZV
DownloadVisualize
BU of 5dzv by Molmil
Protocadherin alpha 7 extracellular cadherin domains 1-5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Protein Pcdha7, ...
Authors:Goodman, K.M, Bahna, F, Honig, B, Shapiro, L.
Deposit date:2015-09-26
Release date:2016-05-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural Basis of Diverse Homophilic Recognition by Clustered alpha- and beta-Protocadherins.
Neuron, 90, 2016
7TTY
DownloadVisualize
BU of 7tty by Molmil
Crystal structure of potent neutralizing antibody 10-40 in complex with bat WIV1 receptor-binding domain
Descriptor: 1040 heavy chain, 1040 light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Reddem, E.R, Shapiro, L.
Deposit date:2022-02-02
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:An antibody class with a common CDRH3 motif broadly neutralizes sarbecoviruses.
Sci Transl Med, 14, 2022

225158

数据于2024-09-18公开中

PDB statisticsPDBj update infoContact PDBjnumon