2EBM
 
 | | Solution structure of the RWD domain of human RWD domain containing protein 1 | | Descriptor: | RWD domain-containing protein 1 | | Authors: | Yoneyama, M, Tomizawa, T, Koshiba, S, Watabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-02-09 | | Release date: | 2007-08-14 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the RWD domain of human RWD domain containing protein 1
To be Published
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1ERZ
 | | CRYSTAL STRUCTURE OF N-CARBAMYL-D-AMINO ACID AMIDOHYDROLASE WITH A NOVEL CATALYTIC FRAMEWORK COMMON TO AMIDOHYDROLASES | | Descriptor: | N-CARBAMYL-D-AMINO ACID AMIDOHYDROLASE | | Authors: | Nakai, T, Hasegawa, T, Yamashita, E, Yamamoto, M, Kumasaka, T, Ueki, T, Nanba, H, Ikenaka, Y, Takahashi, S, Sato, M, Tsukihara, T. | | Deposit date: | 2000-04-06 | | Release date: | 2001-04-06 | | Last modified: | 2024-02-07 | | Method: | X-RAY DIFFRACTION (1.7 Å) | | Cite: | Crystal structure of N-carbamyl-D-amino acid amidohydrolase with a novel catalytic framework common to amidohydrolases.
Structure Fold.Des., 8, 2000
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4BH5
 | | LytM domain of EnvC, an activator of cell wall amidases in Escherichia coli | | Descriptor: | CHLORIDE ION, GLYCEROL, IODIDE ION, ... | | Authors: | Morlot, C, Peters, N.T, Yang, D.C, Uehara, T, Vernet, T, Bernhardt, T.G. | | Deposit date: | 2013-03-29 | | Release date: | 2013-07-03 | | Last modified: | 2023-12-20 | | Method: | X-RAY DIFFRACTION (1.57 Å) | | Cite: | Structure-Function Analysis of the Lytm Domain of Envc, an Activator of Cell Wall Remodeling at the Escherichia Coli Division Site.
Mol.Microbiol., 89, 2013
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4FXC
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1V6C
 | | Crystal Structure of Psychrophilic Subtilisin-like Protease Apa1 from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 | | Descriptor: | CALCIUM ION, SULFATE ION, alkaline serine protease, ... | | Authors: | Dong, D, Ihara, T, Motoshima, H, Watanabe, K. | | Deposit date: | 2003-11-28 | | Release date: | 2004-12-28 | | Last modified: | 2024-10-23 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Crystal Structure of Psychrophilic Subtilisin-like Protease Apa1 from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11
To be Published
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1IOI
 | | x-ray crystalline structures of pyrrolidone carboxyl peptidase from a hyperthermophile, pyrococcus furiosus, and its cys-free mutant | | Descriptor: | PYRROLIDONE CARBOXYL PEPTIDASE | | Authors: | Tanaka, H, Chinami, M, Ota, M, Tsukihara, T, Yutani, K. | | Deposit date: | 2001-03-09 | | Release date: | 2001-03-21 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | X-ray crystalline structures of pyrrolidone carboxyl peptidase from a hyperthermophile, Pyrococcus furiosus, and its cys-free mutant.
J.Biochem., 130, 2001
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5H34
 | | Crystal structure of the C-terminal domain of methionyl-tRNA synthetase (MetRS-C) in Nanoarchaeum equitans | | Descriptor: | Methionine-tRNA ligase | | Authors: | Suzuki, H, Kaneko, A, Yamamoto, T, Nambo, M, Umehara, T, Yoshida, H, Park, S.Y, Tamura, K. | | Deposit date: | 2016-10-20 | | Release date: | 2017-06-21 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (1.748 Å) | | Cite: | Binding Properties of Split tRNA to the C-terminal Domain of Methionyl-tRNA Synthetase of Nanoarchaeum equitans.
J. Mol. Evol., 84, 2017
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1WQZ
 | | Complicated water orientations in the minor groove of B-DNA decamer D(CCATTAATGG)2 observed by neutron diffraction measurements | | Descriptor: | 5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3' | | Authors: | Arai, S, Chatake, T, Ohhara, T, Kurihara, K, Tanaka, I, Suzuki, N, Fujimoto, Z, Mizuno, H, Niimura, N. | | Deposit date: | 2004-10-07 | | Release date: | 2005-06-21 | | Last modified: | 2023-10-25 | | Method: | NEUTRON DIFFRACTION (3 Å) | | Cite: | Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)2 observed by neutron diffraction measurements
Nucleic Acids Res., 33, 2005
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1WQY
 | | X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution | | Descriptor: | 5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3' | | Authors: | Arai, S, Chatake, T, Ohhara, T, Kurihara, K, Tanaka, I, Suzuki, N, Fujimoto, Z, Mizuno, H, Niimura, N. | | Deposit date: | 2004-10-07 | | Release date: | 2005-06-21 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)2 observed by neutron diffraction measurements
Nucleic Acids Res., 33, 2005
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2DHZ
 | | Solution Structure of the RA Domain in the Human Link Guanine Nucleotide Exchange Factor II (Link-GEFII) | | Descriptor: | Rap guanine nucleotide exchange factor (GEF)-like 1 | | Authors: | Zhao, C, Kigawa, T, Yoneyama, M, Koshiba, S, Harada, T, Watanabe, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2006-03-27 | | Release date: | 2006-09-27 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution Structure of the RA Domain in the Human Link Guanine Nucleotide Exchange Factor II (Link-GEFII)
To be Published
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1IOF
 | | X-RAY CRYSTALLINE STRUCTURES OF PYRROLIDONE CARBOXYL PEPTIDASE FROM A HYPERTHERMOPHILE, PYROCOCCUS FURIOSUS, AND ITS CYS-FREE MUTANT | | Descriptor: | PYRROLIDONE CARBOXYL PEPTIDASE | | Authors: | Tanaka, H, Chinami, M, Ota, M, Tsukihara, T, Yutani, K. | | Deposit date: | 2001-03-09 | | Release date: | 2001-03-21 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | X-ray crystalline structures of pyrrolidone carboxyl peptidase from a hyperthermophile, Pyrococcus furiosus, and its cys-free mutant.
J.Biochem., 130, 2001
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7EIC
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7EID
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7EIE
 | | Crystal structure of YEATS2 YEATS domain | | Descriptor: | GLYCEROL, YEATS domain-containing protein 2 | | Authors: | Kikuchi, M, Umehara, T. | | Deposit date: | 2021-03-30 | | Release date: | 2022-04-06 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (1.67 Å) | | Cite: | Elucidation of binding preferences of YEATS domains to site-specific acetylated nucleosome core particles.
J.Biol.Chem., 298, 2022
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2DII
 | | Solution structure of the BSD domain of human TFIIH basal transcription factor complex p62 subunit | | Descriptor: | TFIIH basal transcription factor complex p62 subunit | | Authors: | Yoneyama, M, Tochio, N, Koshiba, S, Watabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2006-03-30 | | Release date: | 2006-09-30 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the BSD domain of human TFIIH basal transcription factor complex p62 subunit
To be Published
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2DI0
 | | Solution Structure of the CUE Domain in the Human Activating Signal Cointegrator 1 Complex Subunit 2 (ASCC2) | | Descriptor: | Activating signal cointegrator 1 complex subunit 2 | | Authors: | Zhao, C, Kigawa, T, Tochio, N, Koshiba, S, Harada, T, Watanabe, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2006-03-27 | | Release date: | 2006-09-27 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution Structure of the CUE Domain in the Human Activating Signal Cointegrator 1 Complex Subunit 2 (ASCC2)
To be Published
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2DMF
 | | An extended conformation of the RWD domain of human Ring finger protein 25 | | Descriptor: | RING finger protein 25 | | Authors: | Yoneyama, M, Tochio, N, Koshiba, S, Watabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2006-04-21 | | Release date: | 2006-10-21 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | An extended conformation of the RWD domain of human Ring finger protein 25
To be Published
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2DHK
 | | Solution structure of the PH domain of TBC1 domain family member 2 protein from human | | Descriptor: | TBC1 domain family member 2 | | Authors: | Li, H, Tochio, N, Koshiba, S, Harada, T, Watanabe, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2006-03-24 | | Release date: | 2006-09-24 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the PH domain of TBC1 domain family member 2 protein from human
To be Published
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2DKL
 | | Solution Structure of the UBA Domain in the Human Trinucleotide Repeat Containing 6C Protein (hTNRC6C) | | Descriptor: | Trinucleotide Repeat Containing 6C Protein | | Authors: | Zhao, C, Kigawa, T, Yoneyama, M, Koshiba, S, Harada, T, Watanabe, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2006-04-12 | | Release date: | 2006-10-12 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution Structure of the UBA Domain in the Human Trinucleotide Repeat Containing 6C Protein (hTNRC6C)
To be Published
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2DME
 | | Solution structure of the TFIIS domain II of human PHD finger protein 3 | | Descriptor: | PHD finger protein 3 | | Authors: | Yoneyama, M, Tochio, N, Koshiba, S, Watabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2006-04-21 | | Release date: | 2006-10-21 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the TFIIS domain II of human PHD finger protein 3
To be Published
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5H6R
 | | Crystal structure of LSD1-CoREST in complex with peptide 13 | | Descriptor: | FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Lysine-specific histone demethylase 1A, ... | | Authors: | Kkuchi, M, Amano, Y, Sato, S, Yokoyama, S, Umezawa, N, Higuchi, T, Umehara, T. | | Deposit date: | 2016-11-14 | | Release date: | 2017-04-12 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | Development and crystallographic evaluation of histone H3 peptide with N-terminal serine substitution as a potent inhibitor of lysine-specific demethylase 1.
Bioorg. Med. Chem., 25, 2017
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2EBK
 | | Solution structure of the RWD domain of human RWD domain containing protein 3 | | Descriptor: | RWD domain-containing protein 3 | | Authors: | Yoneyama, M, Koshiba, S, Watabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-02-09 | | Release date: | 2007-08-14 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the RWD domain of human RWD domain containing protein 3
To be Published
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2ECI
 | | Solution structure of the RING domain of the human TNF receptor-associated factor 6 protein | | Descriptor: | TNF receptor-associated factor 6, ZINC ION | | Authors: | Miyamoto, K, Sato, M, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-02-13 | | Release date: | 2008-03-18 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the RING domain of the human TNF receptor-associated factor 6 protein
To be Published
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2EDZ
 | | Solution structures of the PDZ domain of mus musculus PDZ domain-containing protein 1 | | Descriptor: | PDZ domain-containing protein 1 | | Authors: | Sato, M, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-02-15 | | Release date: | 2008-01-29 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution structures of the PDZ domain of mus musculus PDZ domain-containing protein 1
To be Published
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2EDY
 | | Solution structures of the fn3 domain of human receptor-type tyrosine-protein phosphatase F | | Descriptor: | Receptor-type tyrosine-protein phosphatase F | | Authors: | Sato, M, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-02-15 | | Release date: | 2007-08-21 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution structures of the fn3 domain of human receptor-type tyrosine-protein phosphatase F
To be Published
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