Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1DZT
DownloadVisualize
BU of 1dzt by Molmil
RMLC FROM SALMONELLA TYPHIMURIUM
Descriptor: 3'-O-ACETYLTHYMIDINE-(5' DIPHOSPHATE PHENYL ESTER), 3'-O-ACETYLTHYMIDINE-5'-DIPHOSPHATE, DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, ...
Authors:Naismith, J.H, Giraud, M.F.
Deposit date:2000-03-07
Release date:2000-04-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Rmlc, the Third Enzyme of Dtdp-L-Rhamnose Pathway, is a New Class of Epimerase.
Nat.Struct.Biol., 7, 2000
1DZR
DownloadVisualize
BU of 1dzr by Molmil
RmlC from Salmonella typhimurium
Descriptor: DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, GLYCEROL, SULFATE ION
Authors:Naismith, J.H, Giraud, M.F.
Deposit date:2000-03-07
Release date:2000-04-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Rmlc, the Third Enzyme of Dtdp-L-Rhamnose Pathway, is a New Class of Epimerase.
Nat.Struct.Biol., 7, 2000
1FQ0
DownloadVisualize
BU of 1fq0 by Molmil
KDPG ALDOLASE FROM ESCHERICHIA COLI
Descriptor: CITRIC ACID, KDPG ALDOLASE
Authors:Naismith, J.H.
Deposit date:2000-09-01
Release date:2000-10-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Directed evolution of a new catalytic site in 2-keto-3-deoxy-6-phosphogluconate aldolase from Escherichia coli.
Structure, 9, 2001
1FWR
DownloadVisualize
BU of 1fwr by Molmil
CRYSTAL STRUCTURE OF KDPG ALDOLASE DOUBLE MUTANT K133Q/T161K
Descriptor: CITRIC ACID, KDPG ALDOLASE
Authors:Naismith, J.H, Buchanan, L.V.
Deposit date:2000-09-24
Release date:2000-10-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Directed evolution of a new catalytic site in 2-keto-3-deoxy-6-phosphogluconate aldolase from Escherichia coli.
Structure, 9, 2001
2VG1
DownloadVisualize
BU of 2vg1 by Molmil
Rv1086 E,E-farnesyl diphosphate complex
Descriptor: FARNESYL DIPHOSPHATE, GLYCEROL, PHOSPHATE ION, ...
Authors:Naismith, J.H, Wang, W, Dong, C.
Deposit date:2007-11-07
Release date:2007-11-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structural basis of chain length control in Rv1086.
J. Mol. Biol., 381, 2008
2VFW
DownloadVisualize
BU of 2vfw by Molmil
Rv1086 native
Descriptor: SHORT-CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHETASE, SULFATE ION
Authors:Naismith, J.H, Wang, W, Dong, C.
Deposit date:2007-11-05
Release date:2007-11-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structural basis of chain length control in Rv1086.
J. Mol. Biol., 381, 2008
2V81
DownloadVisualize
BU of 2v81 by Molmil
Native KDPGal structure
Descriptor: 2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE ALDOLASE
Authors:Naismith, J.H.
Deposit date:2007-08-02
Release date:2007-08-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Characterization and crystal structure of Escherichia coli KDPGal aldolase.
Bioorg. Med. Chem., 16, 2008
2XUV
DownloadVisualize
BU of 2xuv by Molmil
The structure of HdeB
Descriptor: HDEB, SULFATE ION
Authors:Naismith, J.H, Wang, W.
Deposit date:2010-10-21
Release date:2011-08-24
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Salt Bridges Regulate Both Dimer Formation and Monomeric Flexibility in Hdeb and May Have a Role in Periplasmic Chaperone Function.
J.Mol.Biol., 415, 2012
4CQJ
DownloadVisualize
BU of 4cqj by Molmil
Fluorinase substrate flexibility enables last step aqueous and ambient 18F fluorination of a RGD peptide for positron emission tomography
Descriptor: 5'-FLUORO-5'-DEOXY-ADENOSINE SYNTHASE, 5'-deoxy-2-ethynyl-5'-fluoroadenosine
Authors:McMahon, S.A, Thompson, S, O'Hagan, D, Naismith, J.H.
Deposit date:2014-02-17
Release date:2014-05-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structure of a Bacterial Fluorinating Enzyme with
To be Published
8B3Y
DownloadVisualize
BU of 8b3y by Molmil
Native Thermogutta terrifontis endoglucanase catalytic domain with a linker at C-terminal from glycoside hydrolase family 5 (TtEnd5A-CDC)
Descriptor: Endoglucanase, SULFATE ION
Authors:Hussain, N, Naismith, J.H, Mikolajek, H.
Deposit date:2022-09-17
Release date:2022-10-12
Last modified:2025-01-15
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural and functional snapshots of a broad-specificity endoglucanase from Thermogutta terrifontis for biomass saccharification.
Arch.Biochem.Biophys., 764, 2024
2IXH
DownloadVisualize
BU of 2ixh by Molmil
RmlC P aeruginosa with dTDP-rhamnose
Descriptor: 2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE, DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE
Authors:Dong, C, Naismith, J.H.
Deposit date:2006-07-08
Release date:2006-10-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:RmlC, a C3' and C5' carbohydrate epimerase, appears to operate via an intermediate with an unusual twist boat conformation.
J. Mol. Biol., 365, 2007
6FCT
DownloadVisualize
BU of 6fct by Molmil
Catalytic subunit HisG from Psychrobacter arcticus ATP phosphoribosyltransferase (HisZG ATPPRT) in complex with PRPP and ATP
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, ADENOSINE-5'-TRIPHOSPHATE, ATP phosphoribosyltransferase, ...
Authors:Alphey, M.S, Ge, Y, Fisher, G, Czekster, C.M, Naismith, J.H, da Silva, R.G.
Deposit date:2017-12-21
Release date:2018-10-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Catalytic and Anticatalytic Snapshots of a Short-Form ATP Phosphoribosyltransferase
Acs Catalysis, 2018
4CL6
DownloadVisualize
BU of 4cl6 by Molmil
Crystal Structure of 3-hydroxydecanoyl-Acyl Carrier Protein Dehydratase (FabA) from Pseudomonas aeruginosa in complex with N-(4- Chlorobenzyl)-3-(2-furyl)-1H-1,2,4-triazol-5-amine
Descriptor: 3-HYDROXYDECANOYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE, N-(4-chlorobenzyl)-5-(furan-2-yl)-1H-1,2,4-triazol-3-amine
Authors:Moynie, L, McMahon, S.A, Duthie, F.G, Naismith, J.H.
Deposit date:2014-01-13
Release date:2015-01-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:A Substrate Mimic Allows High Throughput Assay of the Faba Protein and Consequently the Identification of a Novel Inhibitor of Pseudomonas Aeruginosa Faba.
J.Mol.Biol., 428, 2016
4UVQ
DownloadVisualize
BU of 4uvq by Molmil
PatG Domain of Unknown Function
Descriptor: THIAZOLINE OXIDASE/SUBTILISIN-LIKE PROTEASE, ZINC ION
Authors:Mann, G, Koehnke, J, Bent, A.F, Graham, R, Schwarz-Linek, U, Naismith, J.H.
Deposit date:2014-08-07
Release date:2014-09-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.724 Å)
Cite:The Structure of the Cyanobactin Domain of Unknown Function from Patg in the Patellamide Gene Cluster
Acta Crystallogr.,Sect.F, 70, 2014
4UDS
DownloadVisualize
BU of 4uds by Molmil
Crystal structure of MbdR regulator from Azoarcus sp. CIB
Descriptor: MBDR REGULATOR
Authors:Liu, H, Liu, H.X, MacMahon, S.A, Juarez, J.F, Zamarro, M.T, Eberlein, C, Boll, M, Carmona, M, Diaz, E, Naismith, J.H.
Deposit date:2014-12-11
Release date:2014-12-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Unraveling the Specific Regulation of the Mbd Central Pathway for the Anaerobic Degradation of 3-Methylbenzoate.
J.Biol.Chem., 290, 2015
6TSC
DownloadVisualize
BU of 6tsc by Molmil
OphMA I407P complex with SAH
Descriptor: GLY-PHE-PRO-TRP-MVA-ILE-MVA-VAL-GLY-VAL-PRO-GLY, Peptide N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Song, H, Naismith, J.H.
Deposit date:2019-12-20
Release date:2020-06-24
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Substrate Plasticity of a Fungal Peptide alpha-N-Methyltransferase.
Acs Chem.Biol., 15, 2020
4V1U
DownloadVisualize
BU of 4v1u by Molmil
Heterocyclase in complex with substrate and Cofactor
Descriptor: ADENOSINE MONOPHOSPHATE, CALCIUM ION, LYND, ...
Authors:Koehnke, J, Naismith, J.H.
Deposit date:2014-10-02
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structural Analysis of Leader Peptide Binding Enables Leader-Free Cyanobactin Processing.
Nat.Chem.Biol., 11, 2015
4V1T
DownloadVisualize
BU of 4v1t by Molmil
Heterocyclase in complex with substrate and Cofactor
Descriptor: ADENOSINE-5'-DIPHOSPHATE, LYND, MAGNESIUM ION, ...
Authors:Koehnke, J, Naismith, J.H.
Deposit date:2014-10-02
Release date:2015-01-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural Analysis of Leader Peptide Binding Enables Leader-Free Cyanobactin Processing
Nat.Chem.Biol., 11, 2015
4V1V
DownloadVisualize
BU of 4v1v by Molmil
Heterocyclase in complex with substrate and Cofactor
Descriptor: LYND, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Koehnke, J, Naismith, J.H.
Deposit date:2014-10-02
Release date:2015-01-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Structural Analysis of Leader Peptide Binding Enables Leader-Free Cyanobactin Processing.
Nat.Chem.Biol., 11, 2015
4UW0
DownloadVisualize
BU of 4uw0 by Molmil
Low resolution structure of WbdD with C-terminal bundle ordered to residue 505
Descriptor: S-ADENOSYLMETHIONINE, WBDD
Authors:Hagelueken, G, Huang, H, Naismith, J.H.
Deposit date:2014-08-08
Release date:2014-08-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.87 Å)
Cite:A Coiled-Coil Domain Acts as a Molecular Ruler to Regulate O-Antigen Chain Length in Lipopolysaccharide.
Nat.Struct.Mol.Biol., 22, 2015
2IXL
DownloadVisualize
BU of 2ixl by Molmil
RmlC S. suis with dTDP-rhamnose
Descriptor: 2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE, DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, NICKEL (II) ION
Authors:Dong, C, Naismith, J.H.
Deposit date:2006-07-08
Release date:2006-10-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Rmlc, a C3' and C5' Carbohydrate Epimerase, Appears to Operate Via an Intermediate with an Unusual Twist Boat Conformation.
J.Mol.Biol., 365, 2007
2IXC
DownloadVisualize
BU of 2ixc by Molmil
RmlC M. tuberculosis with dTDP-rhamnose
Descriptor: 2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE, DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE RMLC
Authors:Dong, C, Naismith, J.H.
Deposit date:2006-07-07
Release date:2006-10-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Rmlc, a C3' and C5' Carbohydrate Epimerase, Appears to Operate Via an Intermediate with an Unusual Twist Boat Conformation.
J.Mol.Biol., 365, 2007
3FFE
DownloadVisualize
BU of 3ffe by Molmil
Structure of Achromobactin Synthetase Protein D, (AcsD)
Descriptor: AcsD
Authors:McMahon, S.A, Liu, H, Carter, L, Oke, M, Johnson, K.A, Schmelz, S, Challis, G.L, White, M.F, Naismith, J.H, Scottish Structural Proteomics Facility (SSPF)
Deposit date:2008-12-03
Release date:2009-02-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:AcsD catalyzes enantioselective citrate desymmetrization in siderophore biosynthesis
Nat.Chem.Biol., 5, 2009
3LCC
DownloadVisualize
BU of 3lcc by Molmil
Structure of a SAM-dependent halide methyltransferase from Arabidopsis thaliana
Descriptor: CHLORIDE ION, Putative methyl chloride transferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Schmidberger, J.W, O'Hagan, D, Naismith, J.H.
Deposit date:2010-01-10
Release date:2010-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Halomethane Biosynthesis: Structure of a SAM-Dependent Halide Methyltransferase from Arabidopsis thaliana
Angew.Chem.Int.Ed.Engl., 49, 2010
8BJZ
DownloadVisualize
BU of 8bjz by Molmil
crystal structure of antibody Fab with SiaLac-amidine-Lys
Descriptor: (2~{S})-2-acetamido-6-(2-sulfanylethanimidoylamino)hexanamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, BAR-1 Fab heavy chain, ...
Authors:Moynie, L, Naismith, J.H.
Deposit date:2022-11-08
Release date:2023-09-27
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:crystal structure of antibody Fab with SiaLac-amidine-Lys
To Be Published

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon