3CH8
 
 | | The crystal structure of PDZ-Fibronectin fusion protein | | Descriptor: | C-terminal octapeptide from protein ARVCF, MAGNESIUM ION, fusion protein PDZ-Fibronectin,Fibronectin | | Authors: | Makabe, K, Huang, J, Koide, A, Koide, S. | | Deposit date: | 2008-03-08 | | Release date: | 2009-03-31 | | Last modified: | 2024-02-21 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Structural basis for exquisite specificity of affinity clamps, synthetic binding proteins generated through directed domain-interface evolution.
J.Mol.Biol., 392, 2009
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3AUM
 | | Crystal structure of OspA mutant | | Descriptor: | Outer surface protein A | | Authors: | Makabe, K. | | Deposit date: | 2011-02-10 | | Release date: | 2012-02-15 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | Aromatic cluster mutations produce focal modulations of beta-sheet structure.
Protein Sci., 24, 2015
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3EEX
 | | The crystal structure of OspA mutant | | Descriptor: | HEXAETHYLENE GLYCOL, Outer Surface Protein A | | Authors: | Makabe, K, Biancalana, M, Koide, S. | | Deposit date: | 2008-09-06 | | Release date: | 2009-09-08 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (2.49 Å) | | Cite: | Minimalist design of water-soluble cross-{beta} architecture.
Proc.Natl.Acad.Sci.USA, 107, 2010
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6LA0
 | | Crystal structure of AoRut | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoside hydrolase family 5 | | Authors: | Koseki, T, Makabe, K. | | Deposit date: | 2019-11-11 | | Release date: | 2020-11-11 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (1.75 Å) | | Cite: | Aspergillus oryzae Rutinosidase: Biochemical and Structural Investigation.
Appl.Environ.Microbiol., 87, 2021
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6J48
 | | Glycine mutation on single layer beta-sheet of OspAsm1 | | Descriptor: | Outer surface protein A, TETRAETHYLENE GLYCOL | | Authors: | Makabe, K, Hori, Y. | | Deposit date: | 2019-01-08 | | Release date: | 2019-03-06 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (1.201 Å) | | Cite: | Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
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6J47
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6J49
 | | Grafting VLADV sequence into OspAsm1 | | Descriptor: | Outer surface protein A, TETRAETHYLENE GLYCOL | | Authors: | Makabe, K, Hori, Y. | | Deposit date: | 2019-01-08 | | Release date: | 2019-03-06 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
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5YS7
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5B2A
 | | Crystal structure of a mutant of OspA | | Descriptor: | Outer surface protein A | | Authors: | Hori , Y, Makabe, K. | | Deposit date: | 2016-01-13 | | Release date: | 2017-01-18 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
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5ZRU
 | | Crystal structure of Agl-KA catalytic domain | | Descriptor: | 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, Alpha-1,3-glucanase, CALCIUM ION, ... | | Authors: | Yano, S, Makabe, K. | | Deposit date: | 2018-04-25 | | Release date: | 2019-10-23 | | Last modified: | 2024-03-27 | | Method: | X-RAY DIFFRACTION (1.833 Å) | | Cite: | Crystal structure of the catalytic unit of GH 87-type alpha-1,3-glucanase Agl-KA from Bacillus circulans.
Sci Rep, 9, 2019
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6AIS
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5Z1O
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7FAO
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7FDD
 | | A Crystal structure of OspA mutant | | Descriptor: | DI(HYDROXYETHYL)ETHER, Outer surface protein A | | Authors: | Shiga, S, Makabe, K. | | Deposit date: | 2021-07-16 | | Release date: | 2022-07-20 | | Last modified: | 2024-02-21 | | Method: | X-RAY DIFFRACTION (2.9 Å) | | Cite: | beta-Strand-mediated Domain-swapping in the Absence of Hydrophobic Core Repacking.
J.Mol.Biol., 436, 2024
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7FJR
 | | Structure of a mutant of OspA | | Descriptor: | DI(HYDROXYETHYL)ETHER, Outer surface protein A | | Authors: | Shiga, S, Makabe, K. | | Deposit date: | 2021-08-04 | | Release date: | 2022-08-10 | | Last modified: | 2024-02-21 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | beta-Strand-mediated Domain-swapping in the Absence of Hydrophobic Core Repacking.
J.Mol.Biol., 436, 2024
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2QBW
 | | The crystal structure of PDZ-Fibronectin fusion protein | | Descriptor: | PDZ-Fibronectin fusion protein, Polypeptide | | Authors: | Huang, J, Makabe, K, Koide, A, Koide, S. | | Deposit date: | 2007-06-18 | | Release date: | 2008-04-22 | | Last modified: | 2024-02-21 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Design of protein function leaps by directed domain interface evolution.
Proc.Natl.Acad.Sci.Usa, 105, 2008
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2PI3
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6J6C
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6J5N
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6J5M
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6J5Q
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6J6E
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6J5O
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6J6B
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6J5P
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