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1K2G
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BU of 1k2g by Molmil
Structural basis for the 3'-terminal guanosine recognition by the group I intron
Descriptor: 5'-R(*CP*AP*GP*AP*CP*UP*UP*CP*GP*GP*UP*CP*GP*CP*AP*GP*AP*GP*AP*UP*GP*G)-3'
Authors:Kitamura, Y, Muto, Y, Watanabe, S, Kim, I, Ito, T, Nishiya, Y, Sakamoto, K, Ohtsuki, T, Kawai, G, Watanabe, K, Hosono, K, Takaku, H, Katoh, E, Yamazaki, T, Inoue, T, Yokoyama, S.
Deposit date:2001-09-27
Release date:2002-05-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of an RNA fragment with the P7/P9.0 region and the 3'-terminal guanosine of the tetrahymena group I intron.
RNA, 8, 2002
7B81
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BU of 7b81 by Molmil
Crystal structure of Azotobacter vinelandii L-rhamnose 1-dehydrogenase (NAD bound-form)
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Short-chain dehydrogenase/reductase SDR
Authors:Yoshiwara, K, Watanabe, Y, Watanabe, S.
Deposit date:2020-12-12
Release date:2021-02-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.092 Å)
Cite:Crystal structure of l-rhamnose 1-dehydrogenase involved in the nonphosphorylative pathway of l-rhamnose metabolism in bacteria.
Febs Lett., 595, 2021
1J1W
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BU of 1j1w by Molmil
Crystal Structure Of The Monomeric Isocitrate Dehydrogenase In Complex With NADP+
Descriptor: Isocitrate Dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Yasutake, Y, Watanabe, S, Yao, M, Takada, Y, Fukunaga, N, Tanaka, I.
Deposit date:2002-12-19
Release date:2003-09-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of the Monomeric Isocitrate Dehydrogenase in the Presence of NADP+
J.Biol.Chem., 278, 2003
2ROZ
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BU of 2roz by Molmil
Structure of the C-terminal PID Domain of Fe65L1 Complexed with the Cytoplasmic Tail of APP Reveals a Novel Peptide Binding Mode
Descriptor: Amyloid beta A4 precursor protein-binding family B member 2, peptide from Amyloid beta A4 protein
Authors:Li, H, Koshiba, S, Tochio, N, Watanabe, S, Harada, T, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-25
Release date:2008-07-22
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode
J.Biol.Chem., 283, 2008
2RIK
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BU of 2rik by Molmil
I-band fragment I67-I69 from titin
Descriptor: Titin
Authors:Marino, M, von Castelmur, E, Labeit, D, Labeit, S, Mayans, O.
Deposit date:2007-10-11
Release date:2008-01-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A regular pattern of Ig super-motifs defines segmental flexibility as the elastic mechanism of the titin chain
Proc.Natl.Acad.Sci.Usa, 105, 2008
2RJM
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BU of 2rjm by Molmil
3Ig structure of titin domains I67-I69 E-to-A mutated variant
Descriptor: Titin
Authors:von Castelmur, E, Marino, M, Labeit, D, Labeit, S, Mayans, O.
Deposit date:2007-10-15
Release date:2008-01-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:A regular pattern of Ig super-motifs defines segmental flexibility as the elastic mechanism of the titin chain
Proc.Natl.Acad.Sci.Usa, 105, 2008
2RRF
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BU of 2rrf by Molmil
The solution structure of the C-terminal region of Zinc finger FYVE domain-containing protein 21
Descriptor: Zinc finger FYVE domain-containing protein 21
Authors:Koshiba, S, Tomizawa, T, Hayashi, F, Tochio, N, Harada, T, Watanabe, S, Kigawa, T, Yokoyama, S.
Deposit date:2010-08-03
Release date:2011-08-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:ZF21 protein, a regulator of the disassembly of focal adhesions and cancer metastasis, contains a novel noncanonical pleckstrin homology domain
J.Biol.Chem., 286, 2011
7W7V
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BU of 7w7v by Molmil
'late' E2P of SERCA2b
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2
Authors:Zhang, Y, Watanabe, S, Tsutsumi, A, Inaba, K.
Deposit date:2021-12-06
Release date:2022-12-14
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Multiple sub-state structures of SERCA2b reveal conformational overlap at transition steps during the catalytic cycle.
Cell Rep, 41, 2022
7W7U
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BU of 7w7u by Molmil
The 'Ca2+-unbound' BeF3- of SERCA2b
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2
Authors:Zhang, Y, Watanabe, S, Tsutsumi, A, Inaba, K.
Deposit date:2021-12-06
Release date:2022-12-14
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Multiple sub-state structures of SERCA2b reveal conformational overlap at transition steps during the catalytic cycle.
Cell Rep, 41, 2022
7W7W
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BU of 7w7w by Molmil
E2 Pi of SERCA2b
Descriptor: MAGNESIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, TETRAFLUOROALUMINATE ION
Authors:Zhang, Y, Watanabe, S, Tsutsumi, A, Inaba, K.
Deposit date:2021-12-06
Release date:2022-12-14
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Multiple sub-state structures of SERCA2b reveal conformational overlap at transition steps during the catalytic cycle.
Cell Rep, 41, 2022
7W7T
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BU of 7w7t by Molmil
The E1-BeF3- 2Ca2+ of SERCA2b
Descriptor: BERYLLIUM TRIFLUORIDE ION, CALCIUM ION, MAGNESIUM ION, ...
Authors:Zhang, Y, Watanabe, S, Tsutsumi, A, Inaba, K.
Deposit date:2021-12-06
Release date:2022-12-14
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Multiple sub-state structures of SERCA2b reveal conformational overlap at transition steps during the catalytic cycle.
Cell Rep, 41, 2022
7X9U
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BU of 7x9u by Molmil
Type-II KH motif of human mitochondrial RbfA
Descriptor: Putative ribosome-binding factor A, mitochondrial
Authors:Kuwasako, K, Suzuki, S, Furue, M, Takizawa, M, Takahashi, M, Tsuda, K, Nagata, T, Watanabe, S, Tanaka, A, Kobayashi, N, Kigawa, T, Guntert, P, Shirouzu, M, Yokoyama, S, Muto, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2022-03-16
Release date:2023-01-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:1 H, 13 C, and 15 N resonance assignments and solution structures of the KH domain of human ribosome binding factor A, mtRbfA, involved in mitochondrial ribosome biogenesis.
Biomol.Nmr Assign., 16, 2022
5IJA
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BU of 5ija by Molmil
[NiFe] hydrogenase maturation protease HybD from Thermococcus kodakarensis
Descriptor: Hydrogenase-specific maturation endopeptidase
Authors:Kwon, S, Nishitani, Y, Watanabe, S, Miki, K.
Deposit date:2016-03-01
Release date:2016-06-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of a [NiFe] hydrogenase maturation protease HybD from Thermococcus kodakarensis KOD1
Proteins, 84, 2016
1SBE
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BU of 1sbe by Molmil
SOYBEAN AGGLUTININ FROM GLYCINE MAX
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, MANGANESE (II) ION, ...
Authors:Dessen, A, Olsen, L.R, Gupta, D, Sabesan, S, Sacchettini, J.C, Brewer, C.F.
Deposit date:1995-07-13
Release date:1998-04-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-ray crystallographic studies of unique cross-linked lattices between four isomeric biantennary oligosaccharides and soybean agglutinin.
Biochemistry, 36, 1997
1SBD
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BU of 1sbd by Molmil
SOYBEAN AGGLUTININ COMPLEXED WITH 2,4-PENTASACCHARIDE
Descriptor: CALCIUM ION, MANGANESE (II) ION, SOYBEAN AGGLUTININ, ...
Authors:Dessen, A, Olsen, L.R, Gupta, D, Sabesan, S, Brewer, C.F, Sacchettini, J.C.
Deposit date:1995-07-13
Release date:1998-04-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:X-ray crystallographic studies of unique cross-linked lattices between four isomeric biantennary oligosaccharides and soybean agglutinin.
Biochemistry, 36, 1997
1SBF
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BU of 1sbf by Molmil
SOYBEAN AGGLUTININ
Descriptor: CALCIUM ION, MANGANESE (II) ION, SOYBEAN AGGLUTININ, ...
Authors:Olsen, L.R, Dessen, A, Gupta, D, Sabesan, S, Brewer, C.F, Sacchettini, J.C.
Deposit date:1997-10-21
Release date:1998-04-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:X-ray crystallographic studies of unique cross-linked lattices between four isomeric biantennary oligosaccharides and soybean agglutinin.
Biochemistry, 36, 1997
1ITW
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BU of 1itw by Molmil
Crystal structure of the monomeric isocitrate dehydrogenase in complex with isocitrate and Mn
Descriptor: ISOCITRIC ACID, Isocitrate dehydrogenase, MANGANESE (II) ION
Authors:Yasutake, Y, Watanabe, S, Yao, M, Takada, Y, Fukunaga, N, Tanaka, I.
Deposit date:2002-02-12
Release date:2002-12-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of the Monomeric Isocitrate Dehydrogenase: Evidence of a Protein Monomerization by a Domain Duplication
Structure, 10, 2002
3B43
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BU of 3b43 by Molmil
I-band fragment I65-I70 from titin
Descriptor: Titin
Authors:von Castelmur, E, Marino, M, Labeit, D, Labeit, S, Mayans, O.
Deposit date:2007-10-23
Release date:2008-01-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A regular pattern of Ig super-motifs defines segmental flexibility as the elastic mechanism of the titin chain
Proc.Natl.Acad.Sci.Usa, 105, 2008
2RNL
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BU of 2rnl by Molmil
Solution structure of the EGF-like domain from human Amphiregulin
Descriptor: Amphiregulin
Authors:Qin, X, Hayashi, F, Terada, T, Shirouzu, M, Watanabe, S, Kigawa, T, Yabuta, N, Nojima, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-01-11
Release date:2009-01-20
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of the EGF-like domain from human Amphiregulin
To be Published
4QEG
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BU of 4qeg by Molmil
Crystal structure of domain I10 from titin (space group P41)
Descriptor: CALCIUM ION, Titin
Authors:Bogomolovas, J, Labeit, S, Mayans, O.
Deposit date:2014-05-16
Release date:2015-07-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Exploration of the pathological potential of isolated mSNPs in titin: the cardiomyopathy-linked mutation T2580I
Open Biology, 2016
5B2D
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BU of 5b2d by Molmil
Crystal structure of Mumps virus hemagglutinin-neuraminidase bound to 3-sialyllactose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HN protein, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Kubota, M, Takeuchi, K, Watanabe, S, Ohno, S, Matsuoka, R, Kohda, D, Hiramatsu, H, Suzuki, Y, Nakayama, T, Terada, T, Shimizu, K, Shimizu, N, Yanagi, Y, Hashiguchi, T.
Deposit date:2016-01-14
Release date:2016-09-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.177 Å)
Cite:Trisaccharide containing alpha 2,3-linked sialic acid is a receptor for mumps virus
Proc.Natl.Acad.Sci.USA, 113, 2016
7Y9P
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BU of 7y9p by Molmil
Xylitol dehydrogenase S96C/S99C/Y102C mutant(thermostabilized form) from Pichia stipitis
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ...
Authors:Yoshiwara, K, Watanabe, Y, Watanabe, S.
Deposit date:2022-06-25
Release date:2023-02-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular evolutionary insight of structural zinc atom in yeast xylitol dehydrogenases and its application in bioethanol production by lignocellulosic biomass.
Sci Rep, 13, 2023
1CRY
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BU of 1cry by Molmil
APPLICATION OF AN AUTOMATIC MOLECULAR REPLACEMENT PROCEDURE TO CRYSTAL STRUCTURE OF CYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor: CYTOCHROME C2, HEME C
Authors:Miki, K, Sogabe, S.
Deposit date:1993-12-27
Release date:1994-04-30
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Application of an automatic molecular-replacement procedure to crystal structure analysis of cytochrome c2 from Rhodopseudomonas viridis.
Acta Crystallogr.,Sect.D, 50, 1994
5YY0
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BU of 5yy0 by Molmil
Crystal structure of the HyhL-HypA complex (form II)
Descriptor: Cytosolic NiFe-hydrogenase, alpha subunit, Probable hydrogenase nickel incorporation protein HypA, ...
Authors:Kwon, S, Watanabe, S, Nishitani, Y, Miki, K.
Deposit date:2017-12-07
Release date:2018-06-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.243 Å)
Cite:Crystal structures of a [NiFe] hydrogenase large subunit HyhL in an immature state in complex with a Ni chaperone HypA.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5YXY
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BU of 5yxy by Molmil
Crystal structure of the HyhL-HypA complex (form I)
Descriptor: Cytosolic NiFe-hydrogenase, alpha subunit, Probable hydrogenase nickel incorporation protein HypA, ...
Authors:Kwon, S, Watanabe, S, Nishitani, Y, Miki, K.
Deposit date:2017-12-07
Release date:2018-06-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.299 Å)
Cite:Crystal structures of a [NiFe] hydrogenase large subunit HyhL in an immature state in complex with a Ni chaperone HypA.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

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数据于2024-06-26公开中

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