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4PXV
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BU of 4pxv by Molmil
Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
Descriptor: Chitinase A, ZINC ION
Authors:Ohnuma, T, Umemoto, N, Numata, T, Fukamizo, T.
Deposit date:2014-03-25
Release date:2015-03-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
To be Published
8I5K
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BU of 8i5k by Molmil
Crystal structure of chitin oligosaccharide binding protein from Vibrio cholera in complex with chitotriose.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ABC transporter substrate-binding protein, MAGNESIUM ION
Authors:Ohnuma, T, Takeshita, D.
Deposit date:2023-01-25
Release date:2024-01-03
Method:X-RAY DIFFRACTION (1.219 Å)
Cite:Periplasmic chitooligosaccharide-binding protein requires a three-domain organization for substrate translocation.
Sci Rep, 13, 2023
8I5J
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BU of 8i5j by Molmil
Crystal structure of chitin oligosaccharide binding protein from Vibrio cholera.
Descriptor: ABC transporter substrate-binding protein, MAGNESIUM ION
Authors:Ohnuma, T, Takeshita, D.
Deposit date:2023-01-25
Release date:2024-01-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Periplasmic chitooligosaccharide-binding protein requires a three-domain organization for substrate translocation.
Sci Rep, 13, 2023
7F88
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BU of 7f88 by Molmil
Crystal structure of GH19 chitinase lacking the third loop structure
Descriptor: Chitinase A
Authors:Ohnuma, T, Numata, T.
Deposit date:2021-07-01
Release date:2022-03-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A conserved loop structure of GH19 chitinases assists the enzyme function from behind the core-functional region.
Glycobiology, 32, 2022
4IJ4
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BU of 4ij4 by Molmil
Crystal Structure of a Family GH19 chitinase from Bryum coronatum in complex with (GlcNAc)4
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A
Authors:Numata, T, Umemoto, N, Ohnuma, T, Fukamizo, T.
Deposit date:2012-12-21
Release date:2014-03-26
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of a "loopless" GH19 chitinase in complex with chitin tetrasaccharide spanning the catalytic center.
Biochim.Biophys.Acta, 1844, 2014
4J0L
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BU of 4j0l by Molmil
Crystal Structure of a Family GH19 Chitinase (W72A/E67Q mutant) from rye seeds in complex with two (GlcNAc)4 molecules
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Basic endochitinase C, ...
Authors:Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
Deposit date:2013-01-31
Release date:2013-10-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Complete subsite mapping of a "loopful" GH19 chitinase from rye seeds based on its crystal structure
Febs Lett., 587, 2013
3WH1
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BU of 3wh1 by Molmil
Crystal Structure of a Family GH19 Chitinase from Bryum coronatum in complex with (GlcNAc)4 at 1.0 A resolution
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A
Authors:Numata, T, Umemoto, N, Ohnuma, T, Fukamizo, T.
Deposit date:2013-08-21
Release date:2014-03-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1 Å)
Cite:Crystal structure of a "loopless" GH19 chitinase in complex with chitin tetrasaccharide spanning the catalytic center.
Biochim.Biophys.Acta, 1844, 2014
4DWX
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BU of 4dwx by Molmil
Crystal Structure of a Family GH-19 Chitinase from rye seeds
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Basic endochitinase C, SULFATE ION, ...
Authors:Numata, T, Umemoto, N, Ohnuma, T, Fukamizo, T.
Deposit date:2012-02-27
Release date:2012-08-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure and chitin oligosaccharide-binding mode of a 'loopful' family GH19 chitinase from rye, Secale cereale, seeds
Febs J., 279, 2012
4DYG
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BU of 4dyg by Molmil
Crystal Structure of a Family GH-19 Chitinase from rye seeds in complex with (GlcNAc)4
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Basic endochitinase C, ...
Authors:Numata, T, Umemoto, N, Ohnuma, T, Fukamizo, T.
Deposit date:2012-02-29
Release date:2012-08-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure and chitin oligosaccharide-binding mode of a 'loopful' family GH19 chitinase from rye, Secale cereale, seeds
Febs J., 279, 2012
5YLG
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BU of 5ylg by Molmil
Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
Descriptor: 1,2-ETHANEDIOL, Chitinase A, ZINC ION
Authors:Ohnuma, T, Kitaoku, Y, Umemoto, N, Numata, T, Fukamizo, T.
Deposit date:2017-10-17
Release date:2018-10-24
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
To Be Published
3ALF
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BU of 3alf by Molmil
Crystal Structure of Class V Chitinase from Nicotiana tobaccum
Descriptor: 1,2-ETHANEDIOL, Chitinase, class V, ...
Authors:Numata, T, Osawa, T, Ohnuma, T, Fukamizo, T.
Deposit date:2010-08-03
Release date:2011-03-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure and mode of action of a class V chitinase from Nicotiana tabacum
Plant Mol.Biol., 75, 2011
3AQU
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BU of 3aqu by Molmil
Crystal structure of a class V chitinase from Arabidopsis thaliana
Descriptor: At4g19810, CITRATE ANION
Authors:Numata, T, Ohnuma, T, Osawa, T, Fukamizo, T.
Deposit date:2010-11-19
Release date:2011-07-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:A class V chitinase from Arabidopsis thaliana: gene responses, enzymatic properties, and crystallographic analysis
Planta, 234, 2011
3ALG
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BU of 3alg by Molmil
Crystal Structure of Class V Chitinase (E115Q mutant) from Nicotiana tobaccum in complex with NAG4
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase, ...
Authors:Numata, T, Osawa, T, Ohnuma, T, Fukamizo, T.
Deposit date:2010-08-03
Release date:2011-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure and mode of action of a class V chitinase from Nicotiana tabacum
Plant Mol.Biol., 75, 2011
4MNJ
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BU of 4mnj by Molmil
Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta
Descriptor: ACETATE ION, Chitinase A
Authors:Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T.
Deposit date:2013-09-11
Release date:2014-10-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta
To be Published
4MNL
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BU of 4mnl by Molmil
Crystal Structure of GH18 Chitinase (G77W/E119Q mutant) from Cycas revoluta in complex with (GlcNAc)4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Chitinase A
Authors:Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T.
Deposit date:2013-09-11
Release date:2014-10-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of GH18 Chitinase form Cycad, Cycas revoluta
To be Published
4MNM
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BU of 4mnm by Molmil
Crystal Structure of GH18 Chitinase (G77W/E119Q mutant) from Cycas revoluta in complex with (GlcNAc)4
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A, ...
Authors:Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T.
Deposit date:2013-09-11
Release date:2014-09-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta
To be Published
4MNK
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BU of 4mnk by Molmil
Crystal Structure of GH18 Chitinase from Cycas revoluta in complex with (GlcNAc)3
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T.
Deposit date:2013-09-11
Release date:2014-10-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta
To be Published
5K2L
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BU of 5k2l by Molmil
Crystal structure of LysM domain from Volvox carteri chitinase
Descriptor: 1,2-ETHANEDIOL, Chitinase, lysozyme
Authors:Kitaoku, Y, Numata, T, Fukamizo, T, Ohnuma, T.
Deposit date:2016-05-19
Release date:2017-02-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Chitin oligosaccharide binding to the lysin motif of a novel type of chitinase from the multicellular green alga, Volvox carteri.
Plant Mol. Biol., 93, 2017
5H7T
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BU of 5h7t by Molmil
A GH19 chitinase domain from the Cryptomeria japnonica pollen (CJP-4) allergen
Descriptor: Class IV chitinase
Authors:Takashima, T, Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
Deposit date:2016-11-21
Release date:2017-11-22
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Crystal structure of GH19 catalytic domain of CJP-4 allergen from Japanese cedar (Cryptomeria japonica) pollen.
To Be Published
6JMS
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BU of 6jms by Molmil
CJP38, a beta-1,3-glucanase and allergen of Cryptomeria japonica pollen
Descriptor: 1,2-ETHANEDIOL, Pollen allergen CJP38
Authors:Takashima, T, Numata, T, Fukamizo, T, Ohnuma, T.
Deposit date:2019-03-13
Release date:2020-05-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:CJP38, a beta-1,3-glucanase and allergen of Cryptomeria japonica pollen
To Be Published
4R5E
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BU of 4r5e by Molmil
Crystal Structure of Family GH18 Chitinase from Cycas revoluta a Complex with Allosamidin
Descriptor: 2-acetamido-2-deoxy-beta-D-allopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-allopyranose, ACETATE ION, ALLOSAMIZOLINE, ...
Authors:Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
Deposit date:2014-08-21
Release date:2015-07-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures and inhibitor binding properties of plant class V chitinases: the cycad enzyme exhibits unique structural and functional features.
Plant J., 82, 2015
4RL3
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BU of 4rl3 by Molmil
Crystal Structure of the Catalytic Domain of a family GH18 Chitinase from fern, Peteris ryukyuensis
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Chitinase A, ...
Authors:Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
Deposit date:2014-10-15
Release date:2015-10-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:A class III chitinase without disulfide bonds from the fern, Pteris ryukyuensis: crystal structure and ligand-binding studies.
Planta, 242, 2015
3WIJ
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BU of 3wij by Molmil
Crystal structure of a plant class V chitinase mutant from Cycas revoluta in complex with (GlcNAc)3
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Numata, T, Osawa, T, Umemoto, N, Ohnuma, T, Fukamizo, T.
Deposit date:2013-09-13
Release date:2014-09-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of a plant class V chitinase mutant from Cycas revoluta in complex with (GlcNAc)3
To be Published
4HP0
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BU of 4hp0 by Molmil
Crystal Structure of Hen Egg White Lysozyme in complex with GN3-M
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-1-DEOXYNOJIRIMYCIN, Lysozyme C
Authors:Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
Deposit date:2012-10-23
Release date:2013-01-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:A novel transition-state analogue for lysozyme, 4-O-beta-tri-N-acetylchitotriosyl moranoline, provided evidence supporting the covalent glycosyl-enzyme intermediate.
J.Biol.Chem., 288, 2013
4HPI
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BU of 4hpi by Molmil
Crystal Structure of Hen Egg White Lysozyme complex with GN2-M
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-1-DEOXYNOJIRIMYCIN, Lysozyme C
Authors:Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
Deposit date:2012-10-23
Release date:2013-01-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:A novel transition-state analogue for lysozyme, 4-O-beta-tri-N-acetylchitotriosyl moranoline, provided evidence supporting the covalent glycosyl-enzyme intermediate.
J.Biol.Chem., 288, 2013

 

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