6N0S
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![BU of 6n0s by Molmil](/molmil-images/mine/6n0s) | N-terminal domain of Staphylothermus marinus McrB | Descriptor: | ATPase associated with various cellular activities, AAA_5, SULFATE ION | Authors: | Hosford, C.J, Niu, Y, Chappie, J.S. | Deposit date: | 2018-11-07 | Release date: | 2019-11-13 | Last modified: | 2020-11-25 | Method: | X-RAY DIFFRACTION (1.92 Å) | Cite: | The N-terminal domain of Staphylothermus marinus McrB shares structural homology with PUA-like RNA binding proteins. J.Struct.Biol., 211, 2020
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6P0F
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![BU of 6p0f by Molmil](/molmil-images/mine/6p0f) | N-terminal domain of Thermococcus Gammatolerans McrB | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, AMMONIUM ION, GTPase subunit of restriction endonuclease, ... | Authors: | Hosford, C.J, Chappie, J.S. | Deposit date: | 2019-05-17 | Release date: | 2019-12-18 | Last modified: | 2020-01-29 | Method: | X-RAY DIFFRACTION (1.683 Å) | Cite: | The structure of theThermococcus gammatoleransMcrB N-terminal domain reveals a new mode of substrate recognition and specificity among McrB homologs. J.Biol.Chem., 295, 2020
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6P0G
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![BU of 6p0g by Molmil](/molmil-images/mine/6p0g) | N-terminal domain of Thermococcus Gammatolerans McrB bound to m5C DNA | Descriptor: | DNA (5'-D(P*AP*CP*CP*GP*GP*T)-3'), DNA (5'-D(P*TP*AP*CP*CP*GP*G)-3'), GTPase subunit of restriction endonuclease | Authors: | Hosford, C.J, Chappie, J.S. | Deposit date: | 2019-05-17 | Release date: | 2019-12-18 | Last modified: | 2020-01-29 | Method: | X-RAY DIFFRACTION (2.27 Å) | Cite: | The structure of theThermococcus gammatoleransMcrB N-terminal domain reveals a new mode of substrate recognition and specificity among McrB homologs. J.Biol.Chem., 295, 2020
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6C5D
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![BU of 6c5d by Molmil](/molmil-images/mine/6c5d) | |
6NJX
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![BU of 6njx by Molmil](/molmil-images/mine/6njx) | C-terminal region of the Xanthomonas campestris pv. campestris OLD protein phased with mercury | Descriptor: | IODIDE ION, MERCURY (II) ION, Xcc_ctr_Hg | Authors: | Schiltz, C.J, Lee, A, Partlow, E.A, Hosford, C.J, Chappie, J.S. | Deposit date: | 2019-01-04 | Release date: | 2019-08-07 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Structural characterization of Class 2 OLD family nucleases supports a two-metal catalysis mechanism for cleavage. Nucleic Acids Res., 47, 2019
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6NK8
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![BU of 6nk8 by Molmil](/molmil-images/mine/6nk8) | C-terminal region of the Burkholderia pseudomallei OLD protein | Descriptor: | Class 2 OLD family nuclease, MAGNESIUM ION | Authors: | Schiltz, C.J, Lee, A, Partlow, E.A, Hosford, C.J, Chappie, J.S. | Deposit date: | 2019-01-05 | Release date: | 2019-08-07 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.24 Å) | Cite: | Structural characterization of Class 2 OLD family nucleases supports a two-metal catalysis mechanism for cleavage. Nucleic Acids Res., 47, 2019
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6NJW
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![BU of 6njw by Molmil](/molmil-images/mine/6njw) | C-terminal region of the Xanthomonas campestris pv. campestris OLD protein phased with platinum | Descriptor: | IODIDE ION, MAGNESIUM ION, PLATINUM (II) ION, ... | Authors: | Schiltz, C.J, Lee, A, Partlow, E.A, Hosford, C.J, Chappie, J.S. | Deposit date: | 2019-01-04 | Release date: | 2019-08-07 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.86 Å) | Cite: | Structural characterization of Class 2 OLD family nucleases supports a two-metal catalysis mechanism for cleavage. Nucleic Acids Res., 47, 2019
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6NJV
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![BU of 6njv by Molmil](/molmil-images/mine/6njv) | C-terminal region of the Xanthomonas campestris pv. campestris OLD protein phased with iodine | Descriptor: | IODIDE ION, MAGNESIUM ION, Xcc_CTR_I | Authors: | Schiltz, C.J, Lee, A, Partlow, E.A, Hosford, C.J, Chappie, J.S. | Deposit date: | 2019-01-04 | Release date: | 2019-08-07 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Structural characterization of Class 2 OLD family nucleases supports a two-metal catalysis mechanism for cleavage. Nucleic Acids Res., 47, 2019
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6UT6
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![BU of 6ut6 by Molmil](/molmil-images/mine/6ut6) | Cryo-EM structure of the Escherichia coli McrBC complex | Descriptor: | 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, ... | Authors: | Niu, Y, Suzuki, H, Hosford, C.J, Chappie, J.S, Walz, T. | Deposit date: | 2019-10-29 | Release date: | 2020-10-21 | Last modified: | 2024-03-06 | Method: | ELECTRON MICROSCOPY (3.28 Å) | Cite: | Structural asymmetry governs the assembly and GTPase activity of McrBC restriction complexes. Nat Commun, 11, 2020
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6UT3
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![BU of 6ut3 by Molmil](/molmil-images/mine/6ut3) | |
6UT4
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![BU of 6ut4 by Molmil](/molmil-images/mine/6ut4) | Cryo-EM structure of the asymmetric AAA+ domain hexamer from Thermococcus gammatolerans McrB | Descriptor: | 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GTPase subunit of restriction endonuclease, MAGNESIUM ION | Authors: | Niu, Y, Suzuki, H, Hosford, C.J, Chappie, J.S, Walz, T. | Deposit date: | 2019-10-29 | Release date: | 2020-10-21 | Last modified: | 2024-03-06 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | Structural asymmetry governs the assembly and GTPase activity of McrBC restriction complexes. Nat Commun, 11, 2020
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6UT7
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![BU of 6ut7 by Molmil](/molmil-images/mine/6ut7) | Fitted model for the tetradecameric assembly of Thermococcus gammatolerans McrB AAA+ hexamers with bound McrC | Descriptor: | 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GTPase subunit of restriction endonuclease, GUANOSINE-5'-DIPHOSPHATE, ... | Authors: | Niu, Y, Suzuki, H, Hosford, C.J, Chappie, J.S, Walz, T. | Deposit date: | 2019-10-29 | Release date: | 2020-10-21 | Last modified: | 2024-03-06 | Method: | ELECTRON MICROSCOPY (4.26 Å) | Cite: | Structural asymmetry governs the assembly and GTPase activity of McrBC restriction complexes. Nat Commun, 11, 2020
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6UT5
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![BU of 6ut5 by Molmil](/molmil-images/mine/6ut5) | Cryo-EM structure of the Thermococcus gammatolerans McrBC complex | Descriptor: | 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GTPase subunit of restriction endonuclease, GUANOSINE-5'-DIPHOSPHATE, ... | Authors: | Niu, Y, Suzuki, H, Hosford, C.J, Chappie, J.S, Walz, T. | Deposit date: | 2019-10-29 | Release date: | 2020-10-21 | Last modified: | 2024-03-06 | Method: | ELECTRON MICROSCOPY (2.44 Å) | Cite: | Structural asymmetry governs the assembly and GTPase activity of McrBC restriction complexes. Nat Commun, 11, 2020
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6UT8
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![BU of 6ut8 by Molmil](/molmil-images/mine/6ut8) | Refined half-complex from tetradecameric assembly of Thermococcus gammatolerans McrB AAA+ hexamers with bound McrC | Descriptor: | 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GTPase subunit of restriction endonuclease, GUANOSINE-5'-DIPHOSPHATE, ... | Authors: | Niu, Y, Suzuki, H, Hosford, C.J, Chappie, J.S, Walz, T. | Deposit date: | 2019-10-29 | Release date: | 2020-10-21 | Last modified: | 2024-03-06 | Method: | ELECTRON MICROSCOPY (3.68 Å) | Cite: | Structural asymmetry governs the assembly and GTPase activity of McrBC restriction complexes. Nat Commun, 11, 2020
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6DJQ
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![BU of 6djq by Molmil](/molmil-images/mine/6djq) | Vps1 GTPase-BSE fusion complexed with GDP.AlF4- | Descriptor: | GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SODIUM ION, ... | Authors: | Varlakhanova, N.V, Brady, T.M, Tornabene, B.A, Hosford, C.J, Chappie, J.S, Ford, M.G.J. | Deposit date: | 2018-05-25 | Release date: | 2018-08-22 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Structures of the fungal dynamin-related protein Vps1 reveal a unique, open helical architecture. J. Cell Biol., 217, 2018
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6DEF
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![BU of 6def by Molmil](/molmil-images/mine/6def) | Vps1 GTPase-BSE fusion complexed with GMPPCP | Descriptor: | MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Vps1 GTPase-BSE | Authors: | Ford, M.G.J, Varlakhanova, N.V, Brady, T.M, Chappie, J.S, Hosford, C.J. | Deposit date: | 2018-05-11 | Release date: | 2018-08-22 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.26 Å) | Cite: | Structures of the fungal dynamin-related protein Vps1 reveal a unique, open helical architecture. J. Cell Biol., 217, 2018
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8TWQ
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![BU of 8twq by Molmil](/molmil-images/mine/8twq) | Structure of bacteriophage lambda RexA protein | Descriptor: | CADMIUM ION, Protein rexA, SULFATE ION | Authors: | Adams, M.C, Chappie, J.S, Schiltz, C.J. | Deposit date: | 2023-08-21 | Release date: | 2024-04-17 | Last modified: | 2024-05-22 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | The crystal structure of bacteriophage lambda RexA provides novel insights into the DNA binding properties of Rex-like phage exclusion proteins. Nucleic Acids Res., 52, 2024
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8EPX
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![BU of 8epx by Molmil](/molmil-images/mine/8epx) | Type IIS Restriction Endonuclease PaqCI, DNA bound | Descriptor: | CALCIUM ION, DNA 1a, DNA 1b, ... | Authors: | Kennedy, M.A, Stoddard, B.L. | Deposit date: | 2022-10-06 | Release date: | 2023-03-22 | Last modified: | 2023-06-07 | Method: | ELECTRON MICROSCOPY (3.15 Å) | Cite: | Structures, activity and mechanism of the Type IIS restriction endonuclease PaqCI. Nucleic Acids Res., 51, 2023
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8EM1
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![BU of 8em1 by Molmil](/molmil-images/mine/8em1) | Type IIS Restriction Endonuclease PaqCI, DNA Unbound | Descriptor: | 1,2-ETHANEDIOL, PaqCI, DNA Unbound | Authors: | Kennedy, M.A, Stoddard, B.L. | Deposit date: | 2022-09-26 | Release date: | 2023-03-22 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structures, activity and mechanism of the Type IIS restriction endonuclease PaqCI. Nucleic Acids Res., 51, 2023
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7ULN
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![BU of 7uln by Molmil](/molmil-images/mine/7uln) | Turnip yellows virus N-terminal readthrough domain | Descriptor: | Minor capsid protein P3-RTD | Authors: | Schiltz, C.J, Chappie, J.S. | Deposit date: | 2022-04-05 | Release date: | 2022-11-02 | Last modified: | 2023-10-18 | Method: | X-RAY DIFFRACTION (1.53 Å) | Cite: | Polerovirus N-terminal readthrough domain structures reveal molecular strategies for mitigating virus transmission by aphids Nat Commun, 13, 2022
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7ULO
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![BU of 7ulo by Molmil](/molmil-images/mine/7ulo) | |
6VJF
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![BU of 6vjf by Molmil](/molmil-images/mine/6vjf) | The P-Loop K to A mutation of C. therm Vps1 GTPase-BSE | Descriptor: | MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Putative sorting protein Vps1 | Authors: | Tornabene, B.A, Varlakhanova, N.V, Chappie, J.S, Ford, M.G.J. | Deposit date: | 2020-01-15 | Release date: | 2020-02-19 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.472 Å) | Cite: | Structural and functional characterization of the dominant negative P-loop lysine mutation in the dynamin superfamily protein Vps1. Protein Sci., 29, 2020
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6DI7
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![BU of 6di7 by Molmil](/molmil-images/mine/6di7) | Vps1 GTPase-BSE fusion complexed with GDP | Descriptor: | GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative sorting protein | Authors: | Varlakhanova, N.V, Brady, T.M, Ford, M.G.J. | Deposit date: | 2018-05-22 | Release date: | 2018-08-22 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Structures of the fungal dynamin-related protein Vps1 reveal a unique, open helical architecture. J. Cell Biol., 217, 2018
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