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6CDD
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BU of 6cdd by Molmil
Npl4 zinc finger and MPN domains (Chaetomium thermophilum)
Descriptor: Npl4 zinc finger, ZINC ION
Authors:Bodnar, N.O, Rapoport, T.A.
Deposit date:2018-02-08
Release date:2018-07-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.58233714 Å)
Cite:Structure of the Cdc48 ATPase with its ubiquitin-binding cofactor Ufd1-Npl4.
Nat. Struct. Mol. Biol., 25, 2018
6CHS
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BU of 6chs by Molmil
Cdc48-Npl4 complex in the presence of ATP-gamma-S
Descriptor: MAGNESIUM ION, Npl4, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Kim, K.H, Bodnar, N.O, Walz, T, Rapoport, T.A.
Deposit date:2018-02-22
Release date:2018-07-04
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure of the Cdc48 ATPase with its ubiquitin-binding cofactor Ufd1-Npl4.
Nat. Struct. Mol. Biol., 25, 2018
6OAA
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BU of 6oaa by Molmil
Cdc48-Npl4 complex processing poly-ubiquitinated substrate in the presence of ADP-BeFx, state 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Cell division control protein 48, ...
Authors:Twomey, E.C, Ji, Z, Wales, T.E, Bodnar, N.O, Engen, J.R, Rapoport, T.A.
Deposit date:2019-03-15
Release date:2019-07-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Substrate processing by the Cdc48 ATPase complex is initiated by ubiquitin unfolding.
Science, 365, 2019
6OA9
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BU of 6oa9 by Molmil
Cdc48-Npl4 complex processing poly-ubiquitinated substrate in the presence of ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 48, ...
Authors:Twomey, E.C, Ji, Z, Wales, T.E, Bodnar, N.O, Engen, J.R, Rapoport, T.A.
Deposit date:2019-03-15
Release date:2019-07-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Substrate processing by the Cdc48 ATPase complex is initiated by ubiquitin unfolding.
Science, 365, 2019
6OAB
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BU of 6oab by Molmil
Cdc48-Npl4 complex processing poly-ubiquitinated substrate in the presence of ADP-BeFx, state 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Cell division control protein 48, ...
Authors:Twomey, E.C, Ji, Z, Wales, T.E, Bodnar, N.O, Engen, J.R, Rapoport, T.A.
Deposit date:2019-03-15
Release date:2019-07-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Substrate processing by the Cdc48 ATPase complex is initiated by ubiquitin unfolding.
Science, 365, 2019
6VZE
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BU of 6vze by Molmil
C-terminal domain of mouse surfactant protein B crystallized at low pH
Descriptor: Pulmonary surfactant-associated protein B, SULFATE ION
Authors:Rapoport, T.A, Bodnar, N.O.
Deposit date:2020-02-28
Release date:2020-11-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism of Lamellar Body Formation by Lung Surfactant Protein B.
Mol.Cell, 81, 2021
6VZ0
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BU of 6vz0 by Molmil
C-terminal domain of mouse surfactant protein B crystallized at high pH
Descriptor: Pulmonary surfactant-associated protein B, ZINC ION
Authors:Rapoport, T.A, Bodnar, N.O.
Deposit date:2020-02-27
Release date:2020-11-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mechanism of Lamellar Body Formation by Lung Surfactant Protein B.
Mol.Cell, 81, 2021
6W1B
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BU of 6w1b by Molmil
N-terminal domain of mouse surfactant protein B with bound lipid, Y59A/H79A mutant
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Pulmonary surfactant-associated protein B
Authors:Rapoport, T.A, Bodnar, N.O.
Deposit date:2020-03-04
Release date:2020-11-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Mechanism of Lamellar Body Formation by Lung Surfactant Protein B.
Mol.Cell, 81, 2021
6VYN
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BU of 6vyn by Molmil
N-terminal domain of mouse surfactant protein B with bound lipid, wild type
Descriptor: (7Z,19R,22R)-25-amino-22-hydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphapentacos-7-en-19-yl (9Z)-octadec-9-enoate, Pulmonary surfactant-associated protein B
Authors:Rapoport, T.A, Bodnar, N.O.
Deposit date:2020-02-27
Release date:2020-11-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanism of Lamellar Body Formation by Lung Surfactant Protein B.
Mol.Cell, 81, 2021
6VZD
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BU of 6vzd by Molmil
N-terminal domain of mouse surfactant protein B (K46E/R51E mutant) with bound lipid
Descriptor: (7Z,19R,22R)-25-amino-22-hydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphapentacos-7-en-19-yl (9Z)-octadec-9-enoate, Pulmonary surfactant-associated protein B
Authors:Rapoport, T.A, Bodnar, N.O.
Deposit date:2020-02-28
Release date:2020-11-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Mechanism of Lamellar Body Formation by Lung Surfactant Protein B.
Mol.Cell, 81, 2021
7MBK
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BU of 7mbk by Molmil
N-terminal domain of mouse surfactant protein B, 6W mutant
Descriptor: Pulmonary surfactant-associated protein B
Authors:Milicic, G, Rapoport, T.A.
Deposit date:2021-03-31
Release date:2021-04-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Mechanism of Lamellar Body Formation by Lung Surfactant Protein B.
Mol.Cell, 81, 2021

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