2Z2F
 
 | | X-ray Crystal Structure of Bovine Stomach Lysozyme | | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, Lysozyme C-2, SODIUM ION | | Authors: | Akieda, D, Nonaka, Y, Watanabe, N, Tanaka, I, Kamiya, M, Aizawa, T, Nitta, K, Demura, M, Kawano, K. | | Deposit date: | 2007-05-21 | | Release date: | 2008-05-27 | | Last modified: | 2024-10-09 | | Method: | X-RAY DIFFRACTION (1.5 Å) | | Cite: | Stability of Bovine Stomach Lysozyme in Acidic Condition
To be Published
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2Z2E
 | | Crystal Structure of Canine Milk Lysozyme Stabilized against Non-enzymatic Deamidation | | Descriptor: | Lysozyme C, milk isozyme, SULFATE ION | | Authors: | Nonaka, Y, Akieda, D, Watanabe, N, Tanaka, I, Kamiya, M, Aizawa, T, Nitta, K, Demura, M, Kawano, K. | | Deposit date: | 2007-05-21 | | Release date: | 2007-11-27 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.01 Å) | | Cite: | Spontaneous asparaginyl deamidation of canine milk lysozyme under mild conditions
Proteins, 72, 2008
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2ZOY
 | | The multi-drug binding transcriptional repressor CgmR (CGL2612 protein) from C.glutamicum | | Descriptor: | GLYCEROL, Transcriptional regulator | | Authors: | Itou, H, Yao, M, Watanabe, N, Tanaka, I. | | Deposit date: | 2008-06-20 | | Release date: | 2008-07-08 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | The CGL2612 protein from Corynebacterium glutamicum is a drug resistance-related transcriptional repressor: structural and functional analysis of a newly identified transcription factor from genomic DNA analysis
J.Biol.Chem., 280, 2005
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2ZWB
 | | Neutron crystal structure of wild type human lysozyme in D2O | | Descriptor: | Lysozyme C | | Authors: | Chiba-Kamoshida, K, Matsui, T, Chatake, T, Ohhara, T, Ostermann, A, Tanaka, I, Yutani, K, Niimura, N. | | Deposit date: | 2008-12-02 | | Release date: | 2009-12-08 | | Last modified: | 2024-10-16 | | Method: | NEUTRON DIFFRACTION (1.8 Å) | | Cite: | Site-specific softening of peptide bonds by localized deuterium observed by neutron crystallography of human lysozyme
To be Published
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2ZU7
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2ZCX
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2ZPA
 | | Crystal Structure of tRNA(Met) Cytidine Acetyltransferase | | Descriptor: | ACETYL COENZYME *A, ADENOSINE-5'-DIPHOSPHATE, SULFATE ION, ... | | Authors: | Chimnaronk, S, Manita, T, Yao, M, Tanaka, I. | | Deposit date: | 2008-07-08 | | Release date: | 2009-04-07 | | Last modified: | 2024-10-23 | | Method: | X-RAY DIFFRACTION (2.35 Å) | | Cite: | RNA helicase module in an acetyltransferase that modifies a specific tRNA anticodon
Embo J., 28, 2009
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2ZDS
 | | Crystal Structure of SCO6571 from Streptomyces coelicolor A3(2) | | Descriptor: | Putative DNA-binding protein | | Authors: | Begum, P, Gao, Y.G, Sakai, N, Yao, M, Watanabe, N, Tanaka, I. | | Deposit date: | 2007-11-27 | | Release date: | 2008-12-02 | | Last modified: | 2019-10-16 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Crystal structure of SCO6571 from Streptomyces coelicolor A3(2).
Protein Pept.Lett., 15, 2008
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3A4K
 | | Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA and divalent cations at 2.17 angstrom resolution | | Descriptor: | ACETATE ION, DNA (5'-D(*GP*CP*CP*A)-3'), DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), ... | | Authors: | Watanabe, N, Sato, C, Takasaki, Y, Tanaka, I. | | Deposit date: | 2009-07-09 | | Release date: | 2009-10-20 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.17 Å) | | Cite: | Structures of restriction endonuclease HindIII in complex with its cognate DNA and divalent cations
Acta Crystallogr.,Sect.D, 65, 2009
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2ZXU
 | | Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPP | | Descriptor: | DIMETHYLALLYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, tRNA delta(2)-isopentenylpyrophosphate transferase, ... | | Authors: | Sakai, J, Yao, M, Chimnaronk, S, Tanaka, I. | | Deposit date: | 2009-01-07 | | Release date: | 2009-05-26 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.75 Å) | | Cite: | Snapshots of dynamics in synthesizing N(6)-isopentenyladenosine at the tRNA anticodon
Biochemistry, 48, 2009
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2ZZF
 | | Crystal structure of alanyl-tRNA synthetase without oligomerization domain | | Descriptor: | Alanyl-tRNA synthetase, ZINC ION | | Authors: | Sokabe, M, Ose, T, Tokunaga, K, Nakamura, A, Nureki, O, Yao, M, Tanaka, I. | | Deposit date: | 2009-02-10 | | Release date: | 2009-07-21 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | The structure of alanyl-tRNA synthetase with editing domain.
Proc.Natl.Acad.Sci.USA, 106, 2009
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3A1R
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3A7W
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3A88
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3A7V
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3A87
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3A1Y
 | | The structure of archaeal ribosomal stalk P1/P0 complex | | Descriptor: | 50S ribosomal protein P1 (L12P), Acidic ribosomal protein P0 | | Authors: | Naganuma, T, Yao, M, Nomura, N, Yu, J, Uchiumi, T, Tanaka, I. | | Deposit date: | 2009-04-25 | | Release date: | 2009-11-17 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.13 Å) | | Cite: | Structural basis for translation factor recruitment to the eukaryotic/archaeal ribosomes
J.Biol.Chem., 285, 2010
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3A7T
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3A83
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3A82
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3A8D
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2ZZG
 | | Crystal structure of alanyl-tRNA synthetase in complex with 5''-O-(N-(L-alanyl)-sulfamyoxyl) adenine without oligomerization domain | | Descriptor: | '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE, Alanyl-tRNA synthetase, ZINC ION | | Authors: | Sokabe, M, Ose, T, Tokunaga, K, Nakamura, A, Nureki, O, Yao, M, Tanaka, I. | | Deposit date: | 2009-02-10 | | Release date: | 2009-07-21 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | The structure of alanyl-tRNA synthetase with editing domain.
Proc.Natl.Acad.Sci.USA, 106, 2009
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3A24
 | | Crystal structure of BT1871 retaining glycosidase | | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, alpha-galactosidase | | Authors: | Okuyama, M, Kitamura, M, Hondoh, H, Tanaka, I, Yao, M. | | Deposit date: | 2009-04-28 | | Release date: | 2009-10-06 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Catalytic mechanism of retaining alpha-galactosidase belonging to glycoside hydrolase family 97.
J.Mol.Biol., 392, 2009
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2ZOS
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2ZM5
 | | Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) | | Descriptor: | MAGNESIUM ION, tRNA delta(2)-isopentenylpyrophosphate transferase, tRNA(Phe) | | Authors: | Sakai, J, Yao, M, Chimnaronk, S, Tanaka, I. | | Deposit date: | 2008-04-11 | | Release date: | 2009-04-14 | | Last modified: | 2024-10-23 | | Method: | X-RAY DIFFRACTION (2.55 Å) | | Cite: | Snapshots of dynamics in synthesizing N(6)-isopentenyladenosine at the tRNA anticodon
Biochemistry, 48, 2009
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