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Cryo-EM structure of the circumsporozoite protein of Plasmodium falciparum with a vaccine-elicited antibody reveals maturation of inter-antibody contacts
Descriptor:	Fab311 heavy chain, Fab311 light chain, circumsporozoite protein
Authors:	Cottrell, C.A, Torres, J.L, Ward, A.B.
Deposit date:	2018-09-17
Release date:	2018-10-31
Method:	ELECTRON MICROSCOPY (3.57 Å)
Cite:	Cryo-EM structure ofP. falciparumcircumsporozoite protein with a vaccine-elicited antibody is stabilized by somatically mutated inter-Fab contacts. Sci Adv, 4, 2018

6MLM

H7 HA0 in complex with Fv from H7.5 IgG
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain Fv of H7.5 Fab, Hemagglutinin HA1 chain, ...
Authors:	Pallesen, J, Turner, H.L, Ward, A.B.
Deposit date:	2018-09-27
Release date:	2019-02-20
Last modified:	2020-07-29
Method:	ELECTRON MICROSCOPY (3.5 Å)
Cite:	Potent anti-influenza H7 human monoclonal antibody induces separation of hemagglutinin receptor-binding head domains. PLoS Biol., 17, 2019

6NF5

BG505 MD64 N332-GT5 SOSIP trimer in complex with BG18-like precursor HMP1 fragmentantigen binding and base-binding RM20A3 fragment antigen binding
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG18-like precursor HMP1 fragment antigen binding heavy chain, ...
Authors:	Ozorowski, G, Torres, J.L, Steichen, J.M, Schief, W.R, Ward, A.B.
Deposit date:	2018-12-18
Release date:	2019-11-06
Last modified:	2020-07-29
Method:	ELECTRON MICROSCOPY (3.71 Å)
Cite:	A generalized HIV vaccine design strategy for priming of broadly neutralizing antibody responses. Science, 366, 2019

6NC3

AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody VRC34 fragment antigen binding
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV-1 Env AMC011 v4.2 SOSIP gp120, ...
Authors:	Cottrell, C.A, Ozorowski, G, Torres, J.L, Ward, A.B.
Deposit date:	2018-12-10
Release date:	2019-06-19
Last modified:	2020-07-29
Method:	ELECTRON MICROSCOPY (4.5 Å)
Cite:	Conformational Plasticity in the HIV-1 Fusion Peptide Facilitates Recognition by Broadly Neutralizing Antibodies. Cell Host Microbe, 25, 2019

6NFC

BG505 MD64 N332-GT5 SOSIP trimer in complex with BG18-like precursor HMP42 fragmentantigen binding and base-binding RM20A3 fragment antigen binding
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG18-like precursor HMP42 fragment antigen binding heavy chain, ...
Authors:	Ozorowski, G, Torres, J.L, Ward, A.B.
Deposit date:	2018-12-19
Release date:	2019-11-06
Last modified:	2020-07-29
Method:	ELECTRON MICROSCOPY (3.43 Å)
Cite:	A generalized HIV vaccine design strategy for priming of broadly neutralizing antibody responses. Science, 366, 2019

2B8N

Crystal structure of Glycerate kinase (EC 2.7.1.31) (tm1585) from THERMOTOGA MARITIMA at 2.70 A resolution
Descriptor:	glycerate kinase, putative
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-10-07
Release date:	2005-11-08
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (2.53 Å)
Cite:	Crystal structure of a glycerate kinase (TM1585) from Thermotoga maritima at 2.70 A resolution reveals a new fold Proteins, 65, 2006

2ETS

CRYSTAL STRUCTURE OF A BACTERIAL DOMAIN OF UNKNOWN FUNCTION FROM DUF1798 FAMILY (MW1337) FROM STAPHYLOCOCCUS AUREUS SUBSP. AUREUS AT 2.25 A RESOLUTION
Descriptor:	CHLORIDE ION, PHOSPHATE ION, hypothetical protein
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-10-27
Release date:	2005-11-08
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (2.25 Å)
Cite:	Crystal structures of MW1337R and lin2004: representatives of a novel protein family that adopt a four-helical bundle fold. Proteins, 71, 2008

2F46

Crystal structure of a putative phosphatase (nma1982) from neisseria meningitidis z2491 at 1.41 A resolution
Descriptor:	CHLORIDE ION, UNKNOWN LIGAND, hypothetical protein
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-11-22
Release date:	2006-02-07
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (1.41 Å)
Cite:	Crystal structure of NMA1982 from Neisseria meningitidis at 1.5 A resolution provides a structural scaffold for nonclassical, eukaryotic-like phosphatases. Proteins, 69, 2007

2FEA

Crystal structure of MtnX phosphatase from Bacillus Subtilis at 2.00 A resolution
Descriptor:	1,2-ETHANEDIOL, 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase, MAGNESIUM ION, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-12-15
Release date:	2005-12-27
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Crystal structure of MtnX phosphatase from Bacillus subtilis at 2.0 A resolution provides a structural basis for bipartite phosphomonoester hydrolysis of 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate. Proteins, 69, 2007

2FG0

Crystal structure of a putative gamma-d-glutamyl-l-diamino acid endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.79 A resolution
Descriptor:	COG0791: Cell wall-associated hydrolases (invasion-associated proteins), GLYCEROL
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-12-20
Release date:	2006-01-10
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (1.79 Å)
Cite:	Structural Basis of Murein Peptide Specificity of a gamma-D-Glutamyl-L-Diamino Acid Endopeptidase. Structure, 17, 2009

2EVR

CRYSTAL STRUCTURE OF A PUTATIVE GAMMA-D-GLUTAMYL-L-DIAMINO ACID ENDOPEPTIDASE (NPUN_R0659) FROM NOSTOC PUNCTIFORME PCC 73102 AT 1.60 A RESOLUTION
Descriptor:	1,2-ETHANEDIOL, CHLORIDE ION, COG0791: Cell wall-associated hydrolases (invasion-associated proteins), ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2005-10-31
Release date:	2005-11-22
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Structural Basis of Murein Peptide Specificity of a gamma-D-Glutamyl-L-Diamino Acid Endopeptidase. Structure, 17, 2009

2FIK

Structure of a microbial glycosphingolipid bound to mouse CD1d
Descriptor:	(2S,3R)-3-HYDROXY-2-(TETRADECANOYLAMINO)OCTADECYL ALPHA-D-GALACTOPYRANOSIDURONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:	Wu, D, Zajonc, D.M.
Deposit date:	2005-12-29
Release date:	2006-03-21
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Design of natural killer T cell activators: structure and function of a microbial glycosphingolipid bound to mouse CD1d. Proc.Natl.Acad.Sci.Usa, 103, 2006

2FNA

Crystal structure of an archaeal aaa+ atpase (sso1545) from sulfolobus solfataricus p2 at 2.00 A resolution
Descriptor:	1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Conserved hypothetical protein, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2006-01-10
Release date:	2006-02-07
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Crystal structure of a novel archaeal AAA+ ATPase SSO1545 from Sulfolobus solfataricus. Proteins, 74, 2009

2G36

Crystal structure of Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan-tRNA ligase)(TrpRS) (tm0492) from THERMOTOGA MARITIMA at 2.50 A resolution
Descriptor:	IRON/SULFUR CLUSTER, TRYPTOPHAN, Tryptophanyl-tRNA synthetase
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2006-02-17
Release date:	2006-03-28
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Structure of a tryptophanyl-tRNA synthetase containing an iron-sulfur cluster. Acta Crystallogr.,Sect.F, 66, 2010

2FO4

Enhanced MHC class I binding and immune responses through anchor modification of the non-canonical tumor associated MUC1-8 peptide
Descriptor:	(4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 8-mer from Mucin-1, ...
Authors:	Lazoura, E, Ramsland, P.A.
Deposit date:	2006-01-12
Release date:	2006-11-14
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	Enhanced major histocompatibility complex class I binding and immune responses through anchor modification of the non-canonical tumour-associated mucin 1-8 peptide Immunology, 119, 2006

1F58

IGG1 FAB FRAGMENT (58.2) COMPLEX WITH 24-RESIDUE PEPTIDE (RESIDUES 308-333 OF HIV-1 GP120 (MN ISOLATE) WITH ALA TO AIB SUBSTITUTION AT POSITION 323
Descriptor:	Envelope glycoprotein gp120, PROTEIN (IGG1 ANTIBODY 58.2 (HEAVY CHAIN)), PROTEIN (IGG1 ANTIBODY 58.2 (LIGHT CHAIN))
Authors:	Stanfield, R.L, Cabezas, E, Satterthwait, A.C, Stura, E.A, Profy, A.T, Wilson, I.A.
Deposit date:	1998-10-21
Release date:	1999-02-02
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Dual conformations for the HIV-1 gp120 V3 loop in complexes with different neutralizing fabs. Structure Fold.Des., 7, 1999

3RIZ

Crystal structure of the plant steroid receptor BRI1 ectodomain
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Protein BRASSINOSTEROID INSENSITIVE 1, ...
Authors:	Hothorn, M.
Deposit date:	2011-04-14
Release date:	2011-06-22
Last modified:	2020-07-29
Method:	X-RAY DIFFRACTION (2.523 Å)
Cite:	Structural basis of steroid hormone perception by the receptor kinase BRI1. Nature, 474, 2011

3TCL

Crystal Structure of HIV-1 Neutralizing Antibody CH04
Descriptor:	CH04 Heavy Chain Fab, CH04 Light Chain Fab, IMIDAZOLE
Authors:	Louder, R.K, McLellan, J.S, Pancera, M, Yang, Y, Zhang, B, Bonsignori, M, Kwong, P.D.
Deposit date:	2011-08-09
Release date:	2011-11-30
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (1.906 Å)
Cite:	Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9. Nature, 480, 2011

3SY6

Crystal structure of a fimbrial protein BF1861 [Bacteroides fragilis NCTC 9343] (BF1861) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution
Descriptor:	2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Fimbrial protein BF1861
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2011-07-15
Release date:	2011-08-24
Last modified:	2023-02-01
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	A Distinct Type of Pilus from the Human Microbiome. Cell, 165, 2016

3RJ0

Plant steroid receptor BRI1 ectodomain in complex with brassinolide
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Brassinolide, Protein BRASSINOSTEROID INSENSITIVE 1, ...
Authors:	Hothorn, M.
Deposit date:	2011-04-14
Release date:	2011-06-22
Last modified:	2020-07-29
Method:	X-RAY DIFFRACTION (2.541 Å)
Cite:	Structural basis of steroid hormone perception by the receptor kinase BRI1. Nature, 474, 2011

2PV7

Crystal structure of chorismate mutase / prephenate dehydrogenase (tyrA) (1574749) from Haemophilus influenzae RD at 2.00 A resolution
Descriptor:	NICOTINAMIDE-ADENINE-DINUCLEOTIDE, T-protein [Includes: Chorismate mutase (EC 5.4.99.5) (CM) and Prephenate dehydrogenase (EC 1.3.1.12) (PDH)], TYROSINE
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2007-05-09
Release date:	2007-05-22
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	The structure of Haemophilus influenzae prephenate dehydrogenase suggests unique features of bifunctional TyrA enzymes. Acta Crystallogr.,Sect.F, 66, 2010

2Q3L

CRYSTAL STRUCTURE OF AN UNCHARACTERIZED PROTEIN FROM DUF3478 FAMILY WITH A SPOIIAA-LIKE FOLD (SHEW_3102) FROM SHEWANELLA LOIHICA PV-4 AT 2.25 A RESOLUTION
Descriptor:	(4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, SODIUM ION, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2007-05-30
Release date:	2007-06-12
Last modified:	2023-01-25
Method:	X-RAY DIFFRACTION (2.25 Å)
Cite:	Open and closed conformations of two SpoIIAA-like proteins (YP_749275.1 and YP_001095227.1) provide insights into membrane association and ligand binding. Acta Crystallogr.,Sect.F, 66, 2010

2Q86

Structure of the mouse invariant NKT cell receptor Valpha14
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Valpha14 TCR, Vbeta8.2, ...
Authors:	Zajonc, D.M.
Deposit date:	2007-06-08
Release date:	2008-04-01
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (1.85 Å)
Cite:	Crystal Structures of Mouse CD1d-iGb3 Complex and its Cognate Valpha14 T Cell Receptor Suggest a Model for Dual Recognition of Foreign and Self Glycolipids. J.Mol.Biol., 377, 2008

3R4R

Crystal structure of a fimbrial assembly protein (BDI_3522) from Parabacteroides distasonis ATCC 8503 at 2.38 A resolution
Descriptor:	1,2-ETHANEDIOL, SULFATE ION, hypothetical fimbrial assembly protein
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2011-03-17
Release date:	2011-03-30
Last modified:	2023-02-01
Method:	X-RAY DIFFRACTION (2.38 Å)
Cite:	A Distinct Type of Pilus from the Human Microbiome. Cell, 165, 2016

3U46

CH04H/CH02L P212121
Descriptor:	CH02 Light chain Fab, CH04 Heavy chain Fab
Authors:	Louder, R, Pancera, M, McLellan, J.S, Kwong, P.D.
Deposit date:	2011-10-07
Release date:	2011-11-30
Last modified:	2011-12-21
Method:	X-RAY DIFFRACTION (2.906 Å)
Cite:	Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9. Nature, 480, 2011

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