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2YY3
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BU of 2yy3 by Molmil
Crystal Structure of translation elongation factor EF-1 beta from Pyrococcus horikoshii
Descriptor: Elongation factor 1-beta
Authors:Ishii, T, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-27
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of translation elongation factor EF-1 beta from Pyrococcus horikoshii
To be Published
2YXB
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BU of 2yxb by Molmil
Crystal structure of the methylmalonyl-CoA mutase alpha-subunit from Aeropyrum pernix
Descriptor: Coenzyme B12-dependent mutase
Authors:Handa, N, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-25
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the methylmalonyl-CoA mutase alpha-subunit from Aeropyrum pernix
To be Published
2YYZ
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Crystal structure of Sugar ABC transporter, ATP-binding protein
Descriptor: DI(HYDROXYETHYL)ETHER, SULFATE ION, Sugar ABC transporter, ...
Authors:Ethayathullah, A.S, Bessho, Y, Padmanabhan, B, Singh, T.P, Kaur, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-02
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of Sugar ABC transporter, ATP-binding protein
To be Published
2ZGI
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BU of 2zgi by Molmil
Crystal Structure of Putative 4-amino-4-deoxychorismate lyase
Descriptor: DI(HYDROXYETHYL)ETHER, PYRIDOXAL-5'-PHOSPHATE, Putative 4-amino-4-deoxychorismate lyase, ...
Authors:Padmanabhan, B, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-01-22
Release date:2008-07-22
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure of putative 4-amino-4-deoxychorismate lyase from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 65, 2009
2ZAD
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BU of 2zad by Molmil
Crystal Structure of Muconate Cycloisomerase from Thermotoga maritima MSB8
Descriptor: DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, Muconate cycloisomerase, ...
Authors:Padmanabhan, B, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-10-03
Release date:2008-04-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Muconate Cycloisomerase from Thermotoga maritima MSB8
To be Published
2YXE
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BU of 2yxe by Molmil
Crystal structure of L-isoaspartyl protein carboxyl methyltranferase
Descriptor: ACETATE ION, Protein-L-isoaspartate O-methyltransferase
Authors:Padmanabhan, B, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-26
Release date:2007-10-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of L-isoaspartyl protein carboxyl methyltranferase
To be Published
2YV3
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Crystal Structure of Aspartate Semialdehyde Dehydrogenase from Thermus thermophilus HB8
Descriptor: Aspartate-semialdehyde dehydrogenase
Authors:Kagawa, W, Fujikawa, N, Kurumizaka, H, Bessho, Y, Ellis, M.J, Antonyuk, S.V, Strange, R.W, Hasnain, S.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-07
Release date:2007-10-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of Aspartate Semialdehyde Dehydrogenase from Thermus thermophilus HB8
To be Published
2YVI
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BU of 2yvi by Molmil
Crystal structure of a death domain of human ankryn protein
Descriptor: Ankyrin-1, GLYCEROL
Authors:Ihsanawati, Bessho, Y, Chen, L, Liu, Z.J, Wang, B.C, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-12
Release date:2008-04-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of a death domain of human ankryn protein
To be Published
2YY5
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Crystal Structure of tryptophanyl-tRNA synthetase from Mycoplasma pneumoniae
Descriptor: 5'-O-[(L-TRYPTOPHYLAMINO)SULFONYL]ADENOSINE, SULFATE ION, Tryptophanyl-tRNA synthetase
Authors:Ishii, T, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-27
Release date:2008-04-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structure of tryptophanyl-tRNA synthetase from Mycoplasma pneumoniae
To be Published
2ZG6
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Crystal structure of Hypothetical protein; probable 2-haloalkanoic acid dehalogenase from Sulfolobus tokodaii
Descriptor: Putative uncharacterized protein ST2620
Authors:Padmanabhan, B, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-01-18
Release date:2008-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Hypothetical protein; probable 2-haloalkanoic acid dehalogenase from Sulfolobus tokodaii
To be Published
3AWI
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BU of 3awi by Molmil
Bifunctional tRNA modification enzyme MnmC from Escherichia coli
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC
Authors:Kitamura, A, Sengoku, T, Nishimoto, M, Yokoyama, S, Bessho, Y.
Deposit date:2011-03-23
Release date:2011-06-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the bifunctional tRNA modification enzyme MnmC from Escherichia coli
Protein Sci., 2011
3AXS
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BU of 3axs by Molmil
Complex structure of tRNA methyltransferase Trm1 from Aquifex aeolicus with sinefungin
Descriptor: Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1, SINEFUNGIN, SULFATE ION, ...
Authors:Ihsanawati, Sengoku, T, Yokoyama, S, Bessho, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-04-13
Release date:2011-08-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.162 Å)
Cite:Substrate tRNA recognition mechanism of a multisite-specific tRNA methyltransferase, Aquifex aeolicus Trm1, based on the X-ray crystal structure
J.Biol.Chem., 286, 2011
3AXT
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BU of 3axt by Molmil
Complex structure of tRNA methyltransferase Trm1 from Aquifex aeolicus with S-adenosyl-L-Methionine
Descriptor: Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1, S-ADENOSYLMETHIONINE, SULFATE ION, ...
Authors:Ihsanawati, Sengoku, T, Yokoyama, S, Bessho, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-04-14
Release date:2011-08-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.491 Å)
Cite:Substrate tRNA recognition mechanism of a multisite-specific tRNA methyltransferase, Aquifex aeolicus Trm1, based on the X-ray crystal structure
J.Biol.Chem., 286, 2011
2E21
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BU of 2e21 by Molmil
Crystal structure of TilS in a complex with AMPPNP from Aquifex aeolicus.
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, tRNA(Ile)-lysidine synthase
Authors:Kuratani, M, Yoshikawa, Y, Sekine, S, Ishii, T, Shibata, R, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-11-06
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of the initial binding of tRNA(Ile) lysidine synthetase TilS with ATP and L-lysine
To be Published
2CXA
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BU of 2cxa by Molmil
Crystal structure of Leucyl/phenylalanyl-tRNA protein transferase from Escherichia coli
Descriptor: Leucyl/phenylalanyl-tRNA-protein transferase
Authors:Kato-Murayama, M, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-28
Release date:2005-12-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of leucyl/phenylalanyl-tRNA-protein transferase from Escherichia coli
Protein Sci., 16, 2007
2CYA
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BU of 2cya by Molmil
Crystal structure of tyrosyl-tRNA synthetase from Aeropyrum pernix
Descriptor: SULFATE ION, Tyrosyl-tRNA synthetase
Authors:Kuratani, M, Sakai, H, Takahashi, M, Yanagisawa, T, Kobayashi, T, Murayama, K, Chen, L, Liu, Z.J, Wang, B.C, Kuroishi, C, Kuramitsu, S, Terada, T, Bessho, Y, Shirouzu, M, Sekine, S.I, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-06
Release date:2005-11-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of Tyrosyl-tRNA Synthetases from Archaea
J.Mol.Biol., 355, 2005
2DBI
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BU of 2dbi by Molmil
Crystal Structure of a Hypothetical Protein JW0805 from Escherichia coli
Descriptor: Hypothetical protein ybiU
Authors:Ihsanawati, Murayama, K, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-15
Release date:2006-06-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of a Hypothetical Protein JW0805 from Escherichia coli
To be published
2DBO
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BU of 2dbo by Molmil
Crystal structure of D-Tyr-tRNA(Tyr) deacylase from Aquifex aeolicus
Descriptor: D-tyrosyl-tRNA(Tyr) deacylase
Authors:Ishii, T, Shibata, R, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-15
Release date:2006-06-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Crystal structure of D-Tyr-tRNA(Tyr) deacylase from Aquifex aeolicus
To be Published
2DBS
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BU of 2dbs by Molmil
Crystal structure of a hypothetical protein TTHC002 from Thermus thermophilus HB8
Descriptor: hypothetical protein TTHC002
Authors:Yoshikawa, S, Arai, R, Kamo-Uchikubo, T, Fusatomi, E, Akasaka, R, Bessho, Y, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-16
Release date:2006-06-16
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a hypothetical protein TTHC002 from Thermus thermophilus HB8
To be Published
2DBN
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BU of 2dbn by Molmil
Crystal Structure of a Hypothetical Protein JW0805 at High pH from Escherichia coli
Descriptor: Hypothetical protein ybiU, SULFATE ION
Authors:Ihsanawati, Murayama, K, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-15
Release date:2006-06-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of a Hypothetical Protein JW0805 at High pH from Escherichia coli
To be published
2DDK
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Crystal structure of human myo-inositol monophosphatase 2 (IMPA2) (orthorhombic form)
Descriptor: Inositol monophosphatase 2
Authors:Arai, R, Ito, K, Kamo-Uchikubo, T, Bessho, Y, Ohba, H, Ohnishi, T, Yoshikawa, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-01-30
Release date:2007-02-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of human myo-inositol monophosphatase 2, the product of the putative susceptibility gene for bipolar disorder, schizophrenia, and febrile seizures
Proteins, 67, 2007
2DUD
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BU of 2dud by Molmil
Crystal structure of human mitochondrial single-stranded DNA-binding protein(hmtSSB)
Descriptor: Single-stranded DNA-binding protein
Authors:Dong, X, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-21
Release date:2007-01-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of human mitochondrial single-stranded DNA-binding protein(hmtSSB)
To be Published
2DUL
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BU of 2dul by Molmil
Crystal structure of tRNA G26 methyltransferase Trm1 in apo form from Pyrococcus horikoshii
Descriptor: GLYCEROL, N(2),N(2)-dimethylguanosine tRNA methyltransferase
Authors:Ihsanawati, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-24
Release date:2007-01-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of tRNA N(2),N(2)-Guanosine Dimethyltransferase Trm1 from Pyrococcus horikoshii
J.Mol.Biol., 383, 2008
2EJT
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BU of 2ejt by Molmil
Complex structure of Trm1 from Pyrococcus horikoshii with S-adenosyl-L-Methionine
Descriptor: GLYCEROL, N(2),N(2)-dimethylguanosine tRNA methyltransferase, S-ADENOSYLMETHIONINE
Authors:Ihsanawati, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-20
Release date:2007-09-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of tRNA N(2),N(2)-Guanosine Dimethyltransferase Trm1 from Pyrococcus horikoshii
J.Mol.Biol., 383, 2008
2EGV
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Crystal structure of rRNA methyltransferase with SAM ligand
Descriptor: S-ADENOSYLMETHIONINE, UPF0088 protein aq_165
Authors:Dong, X, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-02
Release date:2007-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of rRNA methyltransferase with SAM ligand
To be Published

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