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1MRC
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BU of 1mrc by Molmil
PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES
Descriptor: IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), IMIDAZOLE, ...
Authors:Pokkuluri, P.R, Cygler, M.
Deposit date:1994-06-13
Release date:1995-02-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes.
J.Mol.Biol., 243, 1994
1MRE
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BU of 1mre by Molmil
PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES
Descriptor: GUANOSINE-5'-DIPHOSPHATE, IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), ...
Authors:Pokkuluri, P.R, Cygler, M.
Deposit date:1994-06-13
Release date:1995-02-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes.
J.Mol.Biol., 243, 1994
1MRF
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BU of 1mrf by Molmil
PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES
Descriptor: 2'-DEOXYINOSINE-5'-MONOPHOSPHATE, IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), ...
Authors:Pokkuluri, P.R, Cygler, M.
Deposit date:1994-06-13
Release date:1995-02-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes.
J.Mol.Biol., 243, 1994
1OS6
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BU of 1os6 by Molmil
Cytochrome c7 (PpcA) from Geobacter sulfurreducens
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, HEME C, PpcA, ...
Authors:Pokkuluri, P.R, Londer, Y.Y, Duke, N.E.C, Long, W.C, Schiffer, M.
Deposit date:2003-03-18
Release date:2004-02-03
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Family of cytochrome c7-type proteins from Geobacter sulfurreducens: structure of one cytochrome c7 at 1.45 A resolution.
Biochemistry, 43, 2004
1CD0
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BU of 1cd0 by Molmil
STRUCTURE OF HUMAN LAMDA-6 LIGHT CHAIN DIMER JTO
Descriptor: PROTEIN (JTO, A VARIABLE DOMAIN FROM LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN)
Authors:Pokkuluri, P.R, Solomon, A, Weiss, D.T, Stevens, F.J, Schiffer, M.
Deposit date:1999-03-05
Release date:2000-03-06
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tertiary structure of human lambda 6 light chains.
Amyloid, 6, 1999
1EK3
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BU of 1ek3 by Molmil
KAPPA-4 IMMUNOGLOBULIN VL, REC
Descriptor: CALCIUM ION, CHLORIDE ION, KAPPA-4 IMMUNOGLOBULIN LIGHT CHAIN VL
Authors:Pokkuluri, P.R, Huang, D.-B, Raffen, R, Stevens, F.J, Schiffer, M.
Deposit date:2000-03-06
Release date:2001-03-06
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Structure of Amyloidogenic Kappa-4 Immunoglobulin VL, REC
To be Published
1EEU
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BU of 1eeu by Molmil
M4L/Y(27D)D/Q89D/T94H mutant of LEN
Descriptor: ISOPROPYL ALCOHOL, KAPPA-4 IMMUNOGLOBULIN (LIGHT CHAIN)
Authors:Pokkuluri, P.R, Cai, X, Gu, M, Stevens, F.J, Schiffer, M.
Deposit date:2000-02-03
Release date:2001-02-03
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Factors contributing to decreased protein stability when aspartic acid residues are in beta-sheet regions.
Protein Sci., 11, 2002
1EFQ
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BU of 1efq by Molmil
Q38D mutant of LEN
Descriptor: KAPPA-4 IMMUNOGLOBULIN (LIGHT CHAIN), URANYL (VI) ION, ZINC ION
Authors:Pokkuluri, P.R, Cai, X, Gu, M, Stevens, F.J, Schiffer, M.
Deposit date:2000-02-09
Release date:2001-02-09
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Factors contributing to decreased protein stability when aspartic acid residues are in beta-sheet regions.
Protein Sci., 11, 2002
1EEQ
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BU of 1eeq by Molmil
M4L/Y(27D)D/T94H Mutant of LEN
Descriptor: KAPPA-4 IMMUNOGLOBULIN (LIGHT CHAIN)
Authors:Pokkuluri, P.R, Raffen, R, Dieckman, L, Boogaard, C, Stevens, F.J, Schiffer, M.
Deposit date:2000-02-01
Release date:2001-02-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Increasing protein stability by polar surface residues: domain-wide consequences of interactions within a loop.
Biophys.J., 82, 2002
4K08
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BU of 4k08 by Molmil
Periplasmic sensor domain of chemotaxis protein, Adeh_3718
Descriptor: ACETATE ION, Methyl-accepting chemotaxis sensory transducer, ZINC ION
Authors:Pokkuluri, P.R, Mack, J.C, Bearden, J, Rakowski, E, Schiffer, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-04-03
Release date:2013-07-17
Last modified:2015-04-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Analysis of periplasmic sensor domains from Anaeromyxobacter dehalogenans 2CP-C: structure of one sensor domain from a histidine kinase and another from a chemotaxis protein.
Microbiologyopen, 2, 2013
4K0D
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BU of 4k0d by Molmil
Periplasmic sensor domain of sensor histidine kinase, Adeh_2942
Descriptor: ACETATE ION, CHLORIDE ION, Periplasmic sensor hybrid histidine kinase, ...
Authors:Pokkuluri, P.R, Mack, J.C, Bearden, J, Rakowski, E, Schiffer, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-04-03
Release date:2013-06-12
Last modified:2015-04-15
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Analysis of periplasmic sensor domains from Anaeromyxobacter dehalogenans 2CP-C: structure of one sensor domain from a histidine kinase and another from a chemotaxis protein.
Microbiologyopen, 2, 2013
3DSY
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BU of 3dsy by Molmil
E(L212)Q mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-14
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Restoring Proton transfer in L212Q mutant of photosynthetic reaction center
To be Published
3DTS
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BU of 3dts by Molmil
E(L212)A, D(L213)A, R(M233)L triple mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-15
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural description of compensatory mutations that restore proton transfer pathways to the L212-L213A mutant bacterial reaction center
To be Published
3DTR
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BU of 3dtr by Molmil
E(L212)Q, L(L227)F double mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-15
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Restoring proton transfer in L212Q mutant of photosynthetic reaction center
To be Published
3DTA
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BU of 3dta by Molmil
E(L212)Q, N(M44)D double mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-14
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Restoring proton transfer in L212Q mutant of photosynthetic reaction center
To be Published
3CU4
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BU of 3cu4 by Molmil
OmcF, Outer membrance cytochrome F from Geobacter sulfurreducens
Descriptor: Cytochrome c family protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-04-15
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Outer membrane cytochrome c, OmcF, from Geobacter sulfurreducens: High structural similarity to an algal cytochrome c(6).
Proteins, 74, 2008
3DU3
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BU of 3du3 by Molmil
E(L212)A, D(L213)A, A(M249)Y triple mutant structure of photosynthetic reaction center
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-16
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:E(L212)A, D(L213)A, A(M249)Y triple mutant structure of photosynthetic reaction center
To be Published
3DU2
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BU of 3du2 by Molmil
E(L212)A mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-16
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:E(L212)A mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
To be Published
3DUQ
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BU of 3duq by Molmil
E(L212)A, D(L213)A, N(M5)D triple mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-17
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural description of compensatory mutations that restore proton transfer pathways to the L212A-L213A mutant bacterial reaction center
To be Published
4RLR
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BU of 4rlr by Molmil
Structure of monoheme cytochrome PccH from Geobacter sulfurreducens
Descriptor: ACETATE ION, CACODYLATE ION, Cytochrome c, ...
Authors:Pokkuluri, P.R, Salgueiro, C.A.
Deposit date:2014-10-17
Release date:2015-04-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:The structure of PccH from Geobacter sulfurreducens - a novel low reduction potential monoheme cytochrome essential for accepting electrons from an electrode.
Febs J., 282, 2015
3UMT
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BU of 3umt by Molmil
scFv12, Anti-BclA antibody single chain variable fragment
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, scFv heavy chain and light chain
Authors:Pokkuluri, P.R.
Deposit date:2011-11-14
Release date:2012-11-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Systematic stability engineering of single-chain antibodies
To be Published
6U97
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BU of 6u97 by Molmil
Structure of OmcF_H47I mutant
Descriptor: Lipoprotein cytochrome c, 1 heme-binding site, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Pokkuluri, P.R.
Deposit date:2019-09-06
Release date:2020-02-19
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Modulation of the Redox Potential and Electron/Proton Transfer Mechanisms in the Outer Membrane Cytochrome OmcF FromGeobacter sulfurreducens.
Front Microbiol, 10, 2019
6NFN
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BU of 6nfn by Molmil
Fab fragment of anti-cocaine antibody h2E2 bound to benzoylecgonine
Descriptor: 3-(BENZOYLOXY)-8-METHYL-8-AZABICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Pokkuluri, P.R, Tan, K.
Deposit date:2018-12-20
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structural analysis of free and liganded forms of the Fab fragment of a high-affinity anti-cocaine antibody, h2E2.
Acta Crystallogr.,Sect.F, 75, 2019
6NEX
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BU of 6nex by Molmil
Fab fragment of anti-cocaine antibody h2E2
Descriptor: ACETATE ION, Anitgen binding fragment light chain, Antigen binding fragment heavy chain, ...
Authors:Pokkuluri, P.R, Tan, K.
Deposit date:2018-12-18
Release date:2019-11-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural analysis of free and liganded forms of the Fab fragment of a high-affinity anti-cocaine antibody, h2E2.
Acta Crystallogr.,Sect.F, 75, 2019
3BXU
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BU of 3bxu by Molmil
PpcB, A Cytochrome c7 from Geobacter sulfurreducens
Descriptor: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-01-14
Release date:2008-07-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural insights into the modulation of the redox properties of two Geobacter sulfurreducens homologous triheme cytochromes.
Biochim.Biophys.Acta, 1777, 2008

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