Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3LVC
DownloadVisualize
BU of 3lvc by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). Colorless form.
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3LVA
DownloadVisualize
BU of 3lva by Molmil
Crystal structure of colorless GFP-like protein from Aequorea coerulescens
Descriptor: GLYCEROL, Green fluorescent protein, SULFATE ION
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3PJ5
DownloadVisualize
BU of 3pj5 by Molmil
Crystal structure of far-red fluorescent protein Katushka crystallized at pH 5.0
Descriptor: Red fluorescent protein eqFP578, SULFATE ION
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2010-11-08
Release date:2011-05-25
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
4HE4
DownloadVisualize
BU of 4he4 by Molmil
Crystal structure of the yellow fluorescent protein phiYFP (Phialidium sp.)
Descriptor: Yellow fluorescent protein
Authors:Pletneva, N, Pletnev, S, Pletnev, V.Z.
Deposit date:2012-10-03
Release date:2013-05-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Yellow fluorescent protein phiYFPv (Phialidium): structure and structure-based mutagenesis.
Acta Crystallogr.,Sect.D, 69, 2013
3PJB
DownloadVisualize
BU of 3pjb by Molmil
Crystal structure of red fluorescent protein eqFP578 crystallized at pH 4.0
Descriptor: GLYCEROL, Red fluorescent protein eqFP578
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2010-11-09
Release date:2011-05-25
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
3PIB
DownloadVisualize
BU of 3pib by Molmil
Crystal structure of red fluorescent protein eqFP578 crystallized at pH 5.5
Descriptor: GLYCEROL, eqFP578 fluorescent protein
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2010-11-05
Release date:2011-05-25
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.154 Å)
Cite:Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
3PJ7
DownloadVisualize
BU of 3pj7 by Molmil
Crystal structure of far-red fluorescent protein Katushka crystallized at pH 8.5
Descriptor: Red fluorescent protein eqFP578
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2010-11-08
Release date:2011-05-25
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
1F90
DownloadVisualize
BU of 1f90 by Molmil
FAB FRAGMENT OF MONOCLONAL ANTIBODY (LNKB-2) AGAINST HUMAN INTERLEUKIN-2 IN COMPLEX WITH ANTIGENIC PEPTIDE
Descriptor: ANTIGENIC NONAPEPTIDE, FAB FRAGMENT OF MONOCLONAL ANTIBODY
Authors:Afonin, P.V, Fokin, A.V, Tsigannik, I.N, Mikhailova, I.Y, Onoprienko, L.V, Mikhaleva, I.I, Ivanov, V.T, Mareeva, T.Y, Nesmeyanov, V.A, Li, N, Duax, W.L, Pletnev, V.Z.
Deposit date:2000-07-06
Release date:2001-07-11
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of an anti-interleukin-2 monoclonal antibody Fab complexed with an antigenic nonapeptide.
Protein Sci., 10, 2001
1BQP
DownloadVisualize
BU of 1bqp by Molmil
THE STRUCTURE OF THE PEA LECTIN-D-MANNOPYRANOSE COMPLEX
Descriptor: CALCIUM ION, MANGANESE (II) ION, PROTEIN (LECTIN), ...
Authors:Ruzeinikov, S.N, Mikhailova, I.Y, Tsygannik, I.N, Pangborn, W, Duax, W, Pletnev, V.Z.
Deposit date:1998-08-17
Release date:1998-08-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structure of the Pea Lectin-D-Mannopyranose Complex at a 2.1 A Resolution
RUSS.J.BIOORGANIC CHEM., 24, 1998
5DQB
DownloadVisualize
BU of 5dqb by Molmil
Green/cyan WasCFP at pH 8.0
Descriptor: GLYCEROL, SODIUM ION, WasCFP_pH2
Authors:Pletnev, V, Pletneva, N, Pletnev, S.
Deposit date:2015-09-14
Release date:2016-07-27
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of pH and T dependent green fluorescent protein WasCFP with Trp based chromophore
Russ.J.Bioorganic Chem., 42 (6), 2016
5J76
DownloadVisualize
BU of 5j76 by Molmil
Structure of Lectin from Colocasia esculenta(L.) Schott
Descriptor: 12kD storage protein, GLYCEROL
Authors:Vajravijayan, S, Pletnev, S, Nandhagopal, N, Gunasekaran, K.
Deposit date:2016-04-06
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of beta-prism lectin from Colocasia esculenta (L.) S chott.
Int.J.Biol.Macromol., 91, 2016
7SFA
DownloadVisualize
BU of 7sfa by Molmil
Branchiostoma floridae fluorescent protein LanFP10A2
Descriptor: Fluorescent protein lanFP10A2
Authors:Pletnev, S, Pletneva, N, Pletnev, V.Z, Muslinkina, L.
Deposit date:2021-10-03
Release date:2022-03-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins.
Protein Sci., 31, 2022
7SF9
DownloadVisualize
BU of 7sf9 by Molmil
Branchiostoma Floridae Violet Fluorescent Protein
Descriptor: Violet Fluorescent Protein
Authors:Pletnev, S, Pletneva, N, Pletnev, V.Z, Muslinkina, L.
Deposit date:2021-10-03
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins.
Protein Sci., 31, 2022
2PXW
DownloadVisualize
BU of 2pxw by Molmil
Crystal Structure of N66D Mutant of Green Fluorescent Protein from Zoanthus sp. at 2.4 A Resolution (Transition State)
Descriptor: GFP-like fluorescent chromoprotein FP506
Authors:Pletnev, S.V, Pletneva, N.V, Tikhonova, T.V, Pletnev, V.Z.
Deposit date:2007-05-14
Release date:2007-09-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
2PXS
DownloadVisualize
BU of 2pxs by Molmil
Crystal Structure of N66D Mutant of Green Fluorescent Protein from Zoanthus sp. at 2.2 A Resolution (Mature State)
Descriptor: GFP-like fluorescent chromoprotein FP506
Authors:Pletnev, S.V, Pletneva, N.V, Tikhonova, T.V, Pletnev, V.Z.
Deposit date:2007-05-14
Release date:2007-09-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
2OJK
DownloadVisualize
BU of 2ojk by Molmil
Crystal Structure of Green Fluorescent Protein from Zoanthus sp at 2.2 A Resolution
Descriptor: GFP-like fluorescent chromoprotein FP506
Authors:Pletneva, N.V, Pletnev, S.V, Tikhonova, T.V, Pletnev, V.Z.
Deposit date:2007-01-12
Release date:2007-09-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
32C2
DownloadVisualize
BU of 32c2 by Molmil
STRUCTURE OF AN ACTIVITY SUPPRESSING FAB FRAGMENT TO CYTOCHROME P450 AROMATASE
Descriptor: IGG1 ANTIBODY 32C2
Authors:Sawicki, M.W, Ng, P.C, Burkhart, B, Pletnev, V, Higashiyama, T, Osawa, Y, Ghosh, D.
Deposit date:1999-04-21
Release date:2000-04-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of an activity suppressing Fab fragment to cytochrome P450 aromatase: insights into the antibody-antigen interactions.
Mol.Immunol., 36, 1999
4EDS
DownloadVisualize
BU of 4eds by Molmil
Crystal structure of far-red fluorescent protein eqFP670
Descriptor: far-red fluorescent protein eqFP650
Authors:Pletnev, S, Pletnev, V.Z, Pletneva, N.V.
Deposit date:2012-03-27
Release date:2012-09-05
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for bathochromic shift of fluorescence in far-red fluorescent proteins eqFP650 and eqFP670.
Acta Crystallogr.,Sect.D, 68, 2012
4EDO
DownloadVisualize
BU of 4edo by Molmil
Crystal structure of far-red fluorescent protein eqFP650
Descriptor: far-red fluorescent protein eqFP650
Authors:Pletnev, S, Pletnev, V.Z, Pletneva, N.V.
Deposit date:2012-03-27
Release date:2012-09-05
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for bathochromic shift of fluorescence in far-red fluorescent proteins eqFP650 and eqFP670.
Acta Crystallogr.,Sect.D, 68, 2012
5VIV
DownloadVisualize
BU of 5viv by Molmil
Crystal structure of monomeric near-infrared fluorescent protein miRFP670
Descriptor: 3-[2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl] methyl]-5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]pro panoic acid, 3-[5-[[(3~{R},4~{R})-3-ethenyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, CHLORIDE ION, ...
Authors:Pletnev, S.
Deposit date:2017-04-17
Release date:2017-06-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies.
Chem Sci, 8, 2017
1LLF
DownloadVisualize
BU of 1llf by Molmil
Cholesterol Esterase (Candida Cylindracea) Crystal Structure at 1.4A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase 3, TRICOSANOIC ACID
Authors:Pletnev, V, Addlagatta, A, Wawrzak, Z, Duax, W.
Deposit date:2002-04-28
Release date:2003-01-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Three-dimensional structure of homodimeric cholesterol esterase-ligand complex at 1.4 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
5VIQ
DownloadVisualize
BU of 5viq by Molmil
Crystal structure of monomeric near-infrared fluorescent protein miRFP709
Descriptor: BILIVERDINE IX ALPHA, monomeric near-infrared fluorescent protein miRFP709
Authors:Pletnev, S.
Deposit date:2017-04-17
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies.
Chem Sci, 8, 2017
3GB3
DownloadVisualize
BU of 3gb3 by Molmil
X-ray structure of genetically encoded photosensitizer KillerRed in native form
Descriptor: KillerRed, SULFATE ION
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2009-02-18
Release date:2009-09-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J.Biol.Chem., 284, 2009
5VIK
DownloadVisualize
BU of 5vik by Molmil
Crystal structure of monomeric near-infrared fluorescent protein miRFP703
Descriptor: BILIVERDINE IX ALPHA, near-infrared fluorescent protein miRFP703
Authors:Pletnev, S.
Deposit date:2017-04-17
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies.
Chem Sci, 8, 2017
3GL4
DownloadVisualize
BU of 3gl4 by Molmil
X-ray structure of photobleached killerred
Descriptor: KillerRed
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2009-03-11
Release date:2009-09-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J.Biol.Chem., 284, 2009

222926

건을2024-07-24부터공개중

PDB statisticsPDBj update infoContact PDBjnumon