2DJH
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![BU of 2djh by Molmil](/molmil-images/mine/2djh) | Crystal structure of the carboxy-terminal ribonuclease domain of Colicin E5 | Descriptor: | 2'-DEOXYURIDINE 3'-MONOPHOSPHATE, 2-AMINO-9-(2-DEOXY-3-O-PHOSPHONOPENTOFURANOSYL)-1,9-DIHYDRO-6H-PURIN-6-ONE, Colicin-E5 | Authors: | Yajima, S, Inoue, S, Ogawa, T, Nonaka, T, Ohsawa, K, Masaki, H. | Deposit date: | 2006-04-03 | Release date: | 2007-01-23 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural basis for sequence-dependent recognition of colicin E5 tRNase by mimicking the mRNA-tRNA interaction Nucleic Acids Res., 34, 2006
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5YRK
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![BU of 5yrk by Molmil](/molmil-images/mine/5yrk) | Crystal structure of PPL3C | Descriptor: | PPL3-b, SULFATE ION | Authors: | Nakae, S, Shionyu, M, Ogawa, T, Shirai, T. | Deposit date: | 2017-11-09 | Release date: | 2018-08-29 | Method: | X-RAY DIFFRACTION (1.35 Å) | Cite: | Structures of jacalin-related lectin PPL3 regulating pearl shell biomineralization Proteins, 86, 2018
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5YRH
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![BU of 5yrh by Molmil](/molmil-images/mine/5yrh) | Crystal structure of PPL3B | Descriptor: | PPL3-a, PPL3-b, SULFATE ION | Authors: | Nakae, S, Shionyu, M, Ogawa, T, Shirai, T. | Deposit date: | 2017-11-09 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | Structures of jacalin-related lectin PPL3 regulating pearl shell biomineralization Proteins, 86, 2018
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5YRM
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![BU of 5yrm by Molmil](/molmil-images/mine/5yrm) | PPL3C-isomaltose complex | Descriptor: | PPL3-b, SULFATE ION, alpha-D-glucopyranose-(1-6)-beta-D-glucopyranose | Authors: | Nakae, S, Shionyu, M, Ogawa, T, Shirai, T. | Deposit date: | 2017-11-09 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Structures of jacalin-related lectin PPL3 regulating pearl shell biomineralization Proteins, 86, 2018
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5YRI
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![BU of 5yri by Molmil](/molmil-images/mine/5yri) | PPL3B-trehalose complex | Descriptor: | PPL3-a, PPL3-b, SULFATE ION, ... | Authors: | Nakae, S, Shionyu, M, Ogawa, T, Shirai, T. | Deposit date: | 2017-11-09 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Structures of jacalin-related lectin PPL3 regulating pearl shell biomineralization Proteins, 86, 2018
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5YRF
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![BU of 5yrf by Molmil](/molmil-images/mine/5yrf) | PPL3A-trehalose complex | Descriptor: | PPL3-A, SULFATE ION, alpha-D-glucopyranose, ... | Authors: | Nakae, S, Shionyu, M, Ogawa, T, Shirai, T. | Deposit date: | 2017-11-09 | Release date: | 2018-08-29 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structures of jacalin-related lectin PPL3 regulating pearl shell biomineralization Proteins, 86, 2018
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5YRJ
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![BU of 5yrj by Molmil](/molmil-images/mine/5yrj) | PPL3B-isomaltose complex | Descriptor: | PPL3-a, PPL3-b, SULFATE ION, ... | Authors: | Nakae, S, Shionyu, M, Ogawa, T, Shirai, T. | Deposit date: | 2017-11-09 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structures of jacalin-related lectin PPL3 regulating pearl shell biomineralization Proteins, 86, 2018
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5YRL
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![BU of 5yrl by Molmil](/molmil-images/mine/5yrl) | PPL3C-trehalose complex | Descriptor: | PPL3-b, SULFATE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose | Authors: | Nakae, S, Shionyu, M, Ogawa, T, Shirai, T. | Deposit date: | 2017-11-09 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structures of jacalin-related lectin PPL3 regulating pearl shell biomineralization Proteins, 86, 2018
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5YRE
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![BU of 5yre by Molmil](/molmil-images/mine/5yre) | Crystal structure of PPL3A | Descriptor: | GLYCEROL, PPL3-A, SULFATE ION | Authors: | Nakae, S, Shionyu, M, Ogawa, T, Shirai, T. | Deposit date: | 2017-11-09 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Structures of jacalin-related lectin PPL3 regulating pearl shell biomineralization Proteins, 86, 2018
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5YRG
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![BU of 5yrg by Molmil](/molmil-images/mine/5yrg) | PPL3A-isomaltose complex | Descriptor: | PPL3-A, SULFATE ION, alpha-D-glucopyranose-(1-6)-beta-D-glucopyranose | Authors: | Nakae, S, Shionyu, M, Ogawa, T, Shirai, T. | Deposit date: | 2017-11-09 | Release date: | 2018-08-29 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Structures of jacalin-related lectin PPL3 regulating pearl shell biomineralization Proteins, 86, 2018
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2ZX1
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![BU of 2zx1 by Molmil](/molmil-images/mine/2zx1) | Rhamnose-binding lectin CSL3 | Descriptor: | CSL3, PHOSPHATE ION | Authors: | Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K. | Deposit date: | 2008-12-19 | Release date: | 2009-06-30 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein J.Mol.Biol., 391, 2009
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2ZX4
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![BU of 2zx4 by Molmil](/molmil-images/mine/2zx4) | Rhamnose-binding lectin CSL3 | Descriptor: | CSL3, PHOSPHATE ION, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, ... | Authors: | Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K. | Deposit date: | 2008-12-19 | Release date: | 2009-06-30 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein J.Mol.Biol., 391, 2009
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3AJZ
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![BU of 3ajz by Molmil](/molmil-images/mine/3ajz) | Crystal Structure of Ancestral Congerin Con-anc | Descriptor: | Ancestral congerin Con-anc, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | Authors: | Konno, A, Kitagawa, A, Watanabe, M, Ogawa, T, Shirai, T. | Deposit date: | 2010-06-29 | Release date: | 2011-05-18 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Tracing protein evolution through ancestral structures of fish galectin Structure, 19, 2011
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3AK0
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![BU of 3ak0 by Molmil](/molmil-images/mine/3ak0) | Crystal Structure of Ancestral Congerin Con-anc'-N28K | Descriptor: | Ancestral congerin Con-anc, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | Authors: | Konno, A, Kitagawa, A, Watanabe, M, Ogawa, T, Shirai, T. | Deposit date: | 2010-06-29 | Release date: | 2011-05-18 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.59 Å) | Cite: | Tracing protein evolution through ancestral structures of fish galectin Structure, 19, 2011
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3AJY
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![BU of 3ajy by Molmil](/molmil-images/mine/3ajy) | Crystal Structure of Ancestral Congerin Con-anc | Descriptor: | Ancestral congerin Con-anc, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | Authors: | Konno, A, Kitagawa, A, Watanabe, M, Ogawa, T, Shirai, T. | Deposit date: | 2010-06-29 | Release date: | 2011-05-18 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.01 Å) | Cite: | Tracing protein evolution through ancestral structures of fish galectin Structure, 19, 2011
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2ZX0
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![BU of 2zx0 by Molmil](/molmil-images/mine/2zx0) | Rhamnose-binding lectin CSL3 | Descriptor: | CSL3, GLYCEROL, PHOSPHATE ION | Authors: | Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K. | Deposit date: | 2008-12-19 | Release date: | 2009-06-30 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein J.Mol.Biol., 391, 2009
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2ZX2
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![BU of 2zx2 by Molmil](/molmil-images/mine/2zx2) | Rhamnose-binding lectin CSL3 | Descriptor: | CSL3, PHOSPHATE ION, alpha-L-rhamnopyranose | Authors: | Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K. | Deposit date: | 2008-12-19 | Release date: | 2009-06-30 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein J.Mol.Biol., 391, 2009
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2ZX3
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![BU of 2zx3 by Molmil](/molmil-images/mine/2zx3) | Rhamnose-binding lectin CSL3 | Descriptor: | CSL3, PHOSPHATE ION, alpha-D-galactopyranose-(1-6)-beta-D-glucopyranose | Authors: | Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K. | Deposit date: | 2008-12-19 | Release date: | 2009-06-30 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein J.Mol.Biol., 391, 2009
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3VJ7
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![BU of 3vj7 by Molmil](/molmil-images/mine/3vj7) | Crystal structure of the carboxy-terminal ribonuclease domain of Colicin E5 R33Q mutant | Descriptor: | 2'-DEOXYURIDINE 3'-MONOPHOSPHATE, 2-AMINO-9-(2-DEOXY-3-O-PHOSPHONOPENTOFURANOSYL)-1,9-DIHYDRO-6H-PURIN-6-ONE, Colicin-E5 | Authors: | Yajima, S, Inoue, S, Fushinobu, S, Ogawa, T, Hidaka, M, Masaki, H. | Deposit date: | 2011-10-13 | Release date: | 2011-11-02 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Identification of the catalytic residues of sequence-specific and histidine-free ribonuclease colicin E5 J.Biochem., 152, 2012
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3AO9
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![BU of 3ao9 by Molmil](/molmil-images/mine/3ao9) | Crystal structure of the C-terminal domain of sequence-specific ribonuclease | Descriptor: | CADMIUM ION, Colicin-E5 | Authors: | Inoue, S, Fushinobu, S, Ogawa, T, Hidaka, M, Masaki, H, Yajima, S. | Deposit date: | 2010-09-22 | Release date: | 2011-09-28 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Identification of the catalytic residues of sequence-specific and histidine-free ribonuclease colicin E5 J.Biochem., 152, 2012
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8KDA
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![BU of 8kda by Molmil](/molmil-images/mine/8kda) | Cryo-EM structure of Hydrogenobacter thermophilus minimal protein-only RNase P (HARP) in complex with pre-tRNAs | Descriptor: | Aquifex aeolicus pre-tRNAVal, MAGNESIUM ION, RNA-free ribonuclease P | Authors: | Teramoto, T, Adachi, N, Yokogawa, T, Koyasu, T, Mayanagi, K, Nakamura, T, Senda, T, Kakuta, Y. | Deposit date: | 2023-08-09 | Release date: | 2024-08-14 | Method: | ELECTRON MICROSCOPY (3.19 Å) | Cite: | Cryo-EM structure of Hydrogenobacter thermophilus minimal protein-only RNase P (HARP) in complex with pre-tRNAs To Be Published
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8KD9
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![BU of 8kd9 by Molmil](/molmil-images/mine/8kd9) | Cryo-EM structure of Aquifex aeolicus minimal protein-only RNase P (HARP) in complex with pre-tRNAs | Descriptor: | Aquifex aeolicus pre-tRNAVal, RNA-free ribonuclease P | Authors: | Teramoto, T, Koyasu, T, Mayanagi, K, Yokogawa, T, Adachi, N, Nakamura, T, Senda, T, Kakuta, Y. | Deposit date: | 2023-08-09 | Release date: | 2024-08-14 | Method: | ELECTRON MICROSCOPY (2.87 Å) | Cite: | Cryo-EM structure of Aquifex aeolicus minimal protein-only RNase P (HARP) in complex with pre-tRNAs To Be Published
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6M5Y
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![BU of 6m5y by Molmil](/molmil-images/mine/6m5y) | |
7F9F
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![BU of 7f9f by Molmil](/molmil-images/mine/7f9f) | Thrombocorticin | Descriptor: | MAGNESIUM ION, Thrombocorticin | Authors: | Kageyama, H, Onodera, K, Sakai, R, Tanaka, Y, Freymann, D.M. | Deposit date: | 2021-07-04 | Release date: | 2022-07-06 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.411 Å) | Cite: | A marine sponge-derived lectin reveals hidden pathway for thrombopoietin receptor activation. Nat Commun, 13, 2022
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7F9G
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![BU of 7f9g by Molmil](/molmil-images/mine/7f9g) | Thrombocorticin in complex with Ca2+ and fucose | Descriptor: | CALCIUM ION, Thrombocorticin, alpha-L-fucopyranose | Authors: | Kageyama, H, Onodera, K, Sakai, R, Tanaka, Y. | Deposit date: | 2021-07-04 | Release date: | 2022-07-06 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.331 Å) | Cite: | A marine sponge-derived lectin reveals hidden pathway for thrombopoietin receptor activation. Nat Commun, 13, 2022
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