1IYG
 
 | | Solution structure of RSGI RUH-001, a Fis1p-like and CGI-135 homologous domain from a mouse cDNA | | Descriptor: | Hypothetical protein (2010003O14) | | Authors: | Ohashi, W, Hirota, H, Yamazaki, T, Koshiba, S, Hamada, T, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2002-08-14 | | Release date: | 2003-02-14 | | Last modified: | 2023-12-27 | | Method: | SOLUTION NMR | | Cite: | Solution structure of RSGI RUH-001, a Fis1p-like and CGI-135 homologous domain from a mouse cDNA
To be Published
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1IRH
 | | The Solution Structure of The Third Kunitz Domain of Tissue Factor Pathway Inhibitor | | Descriptor: | tissue factor pathway inhibitor | | Authors: | Mine, S, Yamazaki, T, Miyata, T, Hara, S, Kato, H. | | Deposit date: | 2001-10-02 | | Release date: | 2002-02-06 | | Last modified: | 2024-10-16 | | Method: | SOLUTION NMR | | Cite: | Structural mechanism for heparin-binding of the third Kunitz domain of human tissue factor pathway inhibitor.
Biochemistry, 41, 2002
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2PLE
 | | NUCLEAR MAGNETIC RESONANCE STRUCTURE OF AN SH2 DOMAIN OF PHOSPHOLIPASE C-GAMMA1 COMPLEXED WITH A HIGH AFFINITY BINDING PEPTIDE | | Descriptor: | PHOSPHOLIPASE C GAMMA-1, C-TERMINAL SH2 DOMAIN, PHOSPHOPEPTIDE FROM PDGF | | Authors: | Pascal, S.M, Singer, A.U, Gish, G, Yamazaki, T, Shoelson, S.E, Pawson, T, Kay, L.E, Forman-Kay, J.D. | | Deposit date: | 1994-08-19 | | Release date: | 1995-01-26 | | Last modified: | 2017-11-29 | | Method: | SOLUTION NMR | | Cite: | Nuclear magnetic resonance structure of an SH2 domain of phospholipase C-gamma 1 complexed with a high affinity binding peptide.
Cell(Cambridge,Mass.), 77, 1994
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2PLD
 | | NUCLEAR MAGNETIC RESONANCE STRUCTURE OF AN SH2 DOMAIN OF PHOSPHOLIPASE C-GAMMA1 COMPLEXED WITH A HIGH AFFINITY BINDING PEPTIDE | | Descriptor: | PHOSPHOLIPASE C GAMMA-1, C-TERMINAL SH2 DOMAIN, PHOSPHOPEPTIDE FROM PDGF | | Authors: | Pascal, S.M, Singer, A.U, Gish, G, Yamazaki, T, Shoelson, S.E, Pawson, T, Kay, L.E, Forman-Kay, J.D. | | Deposit date: | 1994-08-19 | | Release date: | 1995-01-26 | | Last modified: | 2017-11-29 | | Method: | SOLUTION NMR | | Cite: | Nuclear magnetic resonance structure of an SH2 domain of phospholipase C-gamma 1 complexed with a high affinity binding peptide.
Cell(Cambridge,Mass.), 77, 1994
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2RNO
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2RSD
 | | Solution structure of the plant homeodomain (PHD) of the E3 SUMO ligase Siz1 from rice | | Descriptor: | E3 SUMO-protein ligase SIZ1, ZINC ION | | Authors: | Shindo, H, Tsuchiya, W, Suzuki, R, Yamazaki, T. | | Deposit date: | 2012-01-12 | | Release date: | 2012-08-15 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | PHD finger of the SUMO ligase Siz/PIAS family in rice reveals specific binding for methylated histone H3 at lysine 4 and arginine 2
Febs Lett., 586, 2012
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2RRT
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1BXD
 | | NMR STRUCTURE OF THE HISTIDINE KINASE DOMAIN OF THE E. COLI OSMOSENSOR ENVZ | | Descriptor: | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PROTEIN (OSMOLARITY SENSOR PROTEIN (ENVZ)) | | Authors: | Tanaka, T, Saha, S.K, Tomomori, C, Ishima, R, Liu, D, Tong, K.I, Park, H, Dutta, R, Qin, L, Swindells, M.B, Yamazaki, T, Ono, A.M, Kainosho, M, Inouye, M, Ikura, M. | | Deposit date: | 1998-10-02 | | Release date: | 1999-10-02 | | Last modified: | 2023-12-27 | | Method: | SOLUTION NMR | | Cite: | NMR structure of the histidine kinase domain of the E. coli osmosensor EnvZ.
Nature, 396, 1998
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6M0Q
 | | Hydroxylamine oxidoreductase from Nitrosomonas europaea | | Descriptor: | Aerobic hydroxylamine oxidoreductase, DI(HYDROXYETHYL)ETHER, HEME C, ... | | Authors: | Fujiwara, T, Fujimoto, Z, Nishigaya, Y, Yamazaki, T. | | Deposit date: | 2020-02-22 | | Release date: | 2021-03-10 | | Last modified: | 2024-05-08 | | Method: | X-RAY DIFFRACTION (1.99 Å) | | Cite: | Juglone, a plant-derived 1,4-naphthoquinone, binds to hydroxylamine oxidoreductase and inhibits the electron transfer to cytochrome c 554.
Appl.Environ.Microbiol., 89, 2023
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6M0P
 | | Hydroxylamine oxidoreductase in complex with juglone | | Descriptor: | 5-hydroxynaphthalene-1,4-dione, Aerobic hydroxylamine oxidoreductase, DI(HYDROXYETHYL)ETHER, ... | | Authors: | Fujiwara, T, Fujimoto, Z, Nishigaya, Y, Yamazaki, T. | | Deposit date: | 2020-02-22 | | Release date: | 2021-03-10 | | Last modified: | 2024-05-08 | | Method: | X-RAY DIFFRACTION (2.78 Å) | | Cite: | Juglone, a plant-derived 1,4-naphthoquinone, binds to hydroxylamine oxidoreductase and inhibits the electron transfer to cytochrome c 554.
Appl.Environ.Microbiol., 89, 2023
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1IYM
 | | RING-H2 finger domain of EL5 | | Descriptor: | EL5, ZINC ION | | Authors: | Katoh, E, Katoh, S, Minami, E, Yamazaki, T. | | Deposit date: | 2002-08-30 | | Release date: | 2003-07-22 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | High Precision NMR Structure and Function of the RING-H2 Finger Domain of EL5, a Rice Protein Whose Expression Is Increased upon Exposure to Pathogen-derived Oligosaccharides
J.Biol.Chem., 278, 2003
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2RNN
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6LK7
 | | crystal structure of Os1348 from Pseudomonas sp. Os17 | | Descriptor: | Nitrile hydratase, alpha chain | | Authors: | Takeuchi, K, Tsuchiya, W, Fujimoto, Z, Yamada, K, Someya, N, Yamazaki, T. | | Deposit date: | 2019-12-18 | | Release date: | 2020-11-11 | | Last modified: | 2024-04-03 | | Method: | X-RAY DIFFRACTION (1.903 Å) | | Cite: | Discovery of an Antibiotic-Related Small Protein of Biocontrol Strain Pseudomonas sp. Os17 by a Genome-Mining Strategy.
Front Microbiol, 11, 2020
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2CVO
 | | Crystal structure of putative N-acetyl-gamma-glutamyl-phosphate reductase (AK071544) from rice (Oryza sativa) | | Descriptor: | putative Semialdehyde dehydrogenase | | Authors: | Nonaka, T, Kita, A, Miura-Ohnuma, J, Katoh, E, Inagaki, N, Yamazaki, T, Miki, K. | | Deposit date: | 2005-06-10 | | Release date: | 2005-12-06 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Crystal structure of putative N-acetyl-gamma-glutamyl-phosphate reductase (AK071544) from rice (Oryza sativa)
Proteins, 61, 2005
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1G4F
 | | NMR STRUCTURE OF THE FIFTH DOMAIN OF HUMAN BETA2-GLYCOPROTEIN I | | Descriptor: | BETA2-GLYCOPROTEIN I | | Authors: | Hoshino, M, Hagihara, Y, Nishii, I, Yamazaki, T, Kato, H, Goto, Y. | | Deposit date: | 2000-10-27 | | Release date: | 2000-11-15 | | Last modified: | 2022-02-23 | | Method: | SOLUTION NMR | | Cite: | Identification of the phospholipid-binding site of human beta(2)-glycoprotein I domain V by heteronuclear magnetic resonance.
J.Mol.Biol., 304, 2000
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1G4G
 | | NMR STRUCTURE OF THE FIFTH DOMAIN OF HUMAN BETA2-GLYCOPROTEIN I | | Descriptor: | BETA2-GLYCOPROTEIN I | | Authors: | Hoshino, M, Hagihara, Y, Nishii, I, Yamazaki, T, Kato, H, Goto, Y. | | Deposit date: | 2000-10-27 | | Release date: | 2000-11-15 | | Last modified: | 2022-02-23 | | Method: | SOLUTION NMR | | Cite: | Identification of the phospholipid-binding site of human beta(2)-glycoprotein I domain V by heteronuclear magnetic resonance.
J.Mol.Biol., 304, 2000
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1WFF
 | | Solution structure of the zf-AN1 domain from mouse RIKEN cDNA 2810002D23 protein | | Descriptor: | RIKEN cDNA 2810002D23 protein, ZINC ION | | Authors: | Tomizawa, T, Kigawa, T, Izumi, K, Yoshida, M, Yamazaki, T, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2004-05-26 | | Release date: | 2004-11-26 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the zf-AN1 domain from mouse RIKEN cDNA 2810002D23 protein
To be Published
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1WIF
 | | The solution structure of RSGI RUH-020, a PDZ domain of hypothetical protein from mouse | | Descriptor: | RIKEN cDNA 4930408O21 | | Authors: | Ohashi, W, Yamazaki, T, Hirota, H, Tomizawa, T, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2004-05-28 | | Release date: | 2004-11-28 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | The solution structure of RSGI RUH-020, a PDZ domain of hypothetical protein from mouse
To be Published
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2CP8
 | | Solution structure of the RSGI RUH-046, a UBA domain from human Next to BRCA1 gene 1 protein (KIAA0049 protein) R923H variant | | Descriptor: | Next to BRCA1 gene 1 protein | | Authors: | Ohashi, W, Hirota, H, Yamazaki, T, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2005-05-19 | | Release date: | 2005-11-19 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the RSGI RUH-046, a UBA domain from human Next to BRCA1 gene 1 protein (KIAA0049 protein) R923H variant
To be Published
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1VEG
 | | Solution Structure of RSGI RUH-012, a UBA Domain from Mouse cDNA | | Descriptor: | NEDD8 ultimate buster-1 | | Authors: | Abe, T, Hirota, H, Izumi, K, Yoshida, M, Yamazaki, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2004-03-31 | | Release date: | 2004-09-30 | | Last modified: | 2023-12-27 | | Method: | SOLUTION NMR | | Cite: | Solution Structure of RSGI RUH-012, a UBA Domain from Mouse cDNA
To be Published
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1UHM
 | | Solution structure of the globular domain of linker histone homolog Hho1p from S. cerevisiae | | Descriptor: | Histone H1 | | Authors: | Ono, K, Kusano, O, Shimotakahara, S, Shimizu, M, Yamazaki, T, Shindo, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2003-07-05 | | Release date: | 2003-12-16 | | Last modified: | 2023-12-27 | | Method: | SOLUTION NMR | | Cite: | The linker histone homolog Hho1p from Saccharomyces cerevisiae represents a winged helix-turn-helix fold as determined by NMR spectroscopy.
Nucleic Acids Res., 31, 2003
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3WEA
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1UJD
 | | Solution Structure of RSGI RUH-003, a PDZ domain of hypothetical KIAA0559 protein from human cDNA | | Descriptor: | KIAA0559 protein | | Authors: | Ohashi, W, Hirota, H, Yamazaki, T, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2003-07-31 | | Release date: | 2004-01-31 | | Last modified: | 2023-12-27 | | Method: | SOLUTION NMR | | Cite: | Solution Structure of RSGI RUH-003, a PDZ domain of hypothetical KIAA0559 protein from human cDNA
To be published
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1VEH
 | | Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA | | Descriptor: | NifU-like protein HIRIP5 | | Authors: | Ohashi, W, Hirota, H, Yamazaki, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2004-03-31 | | Release date: | 2004-09-30 | | Last modified: | 2023-12-27 | | Method: | SOLUTION NMR | | Cite: | Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA
To be published
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3WEB
 | | Crystal structure of a Niemann-Pick type C2 protein from Japanese carpenter ant in complex with oleic acid | | Descriptor: | Niemann-Pick type C2 protein, OLEIC ACID | | Authors: | Fujimoto, Z, Tsuchiya, W, Ishida, Y, Yamazaki, T. | | Deposit date: | 2013-07-02 | | Release date: | 2014-02-05 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (1.7 Å) | | Cite: | Niemann-Pick type C2 protein mediating chemical communication in the worker ant
Proc.Natl.Acad.Sci.USA, 111, 2014
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