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6YES
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BU of 6yes by Molmil
Crystal structure of type I-D CRISPR-Cas nuclease Cas10d
分子名称: CRISPR-associated protein, CscA, ZINC ION
著者Brodersen, D.E, Van, L.B, Manav, M.C.
登録日2020-03-25
公開日2020-10-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (4.1 Å)
主引用文献Structural basis for inhibition of an archaeal CRISPR-Cas type I-D large subunit by an anti-CRISPR protein.
Nat Commun, 11, 2020
6EXP
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BU of 6exp by Molmil
Crystal structure of the SIRV3 AcrID1 (gp02) anti-CRISPR protein
分子名称: SIRV3 AcrID1 (gp02) anti-CRISPR protein
著者He, F, Bhoobalan-Chitty, Y, Van, L.B, Kjeldsen, A.L, Dedola, M, Makarova, K.S, Koonin, E.V, Brodersen, D.E, Peng, X.
登録日2017-11-08
公開日2018-01-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Anti-CRISPR proteins encoded by archaeal lytic viruses inhibit subtype I-D immunity.
Nat Microbiol, 3, 2018
2HBM
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BU of 2hbm by Molmil
Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active site and the HRDC domain; Protein in complex with Mn, Zn, and UMP
分子名称: Exosome complex exonuclease RRP6, MANGANESE (II) ION, URIDINE-5'-MONOPHOSPHATE, ...
著者Midtgaard, S.F, Assenholt, J, Jonstrup, A.T, Van, L.B, Jensen, T.H, Brodersen, D.E.
登録日2006-06-14
公開日2006-07-25
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the nuclear exosome component Rrp6p reveals an interplay between the active site and the HRDC domain.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3G10
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BU of 3g10 by Molmil
Structure of S. pombe Pop2p - Mg2+ and Mn2+ bound form
分子名称: CCR4-Not complex subunit Caf1, MAGNESIUM ION, MANGANESE (II) ION
著者Andersen, K.R, Jonstrup, A.T, Van, L.B, Brodersen, D.E.
登録日2009-01-29
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.597 Å)
主引用文献The activity and selectivity of fission yeast Pop2p are affected by a high affinity for Zn2+ and Mn2+ in the active site
Rna, 15, 2009
3G0Z
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BU of 3g0z by Molmil
Structure of S. pombe Pop2p - Zn2+ and Mn2+ bound form
分子名称: CCR4-Not complex subunit Caf1, MANGANESE (II) ION, ZINC ION
著者Andersen, K.R, Jonstrup, A.T, Van, L.B, Brodersen, D.E.
登録日2009-01-29
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.004 Å)
主引用文献The activity and selectivity of fission yeast Pop2p are affected by a high affinity for Zn2+ and Mn2+ in the active site
Rna, 15, 2009
2HBJ
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BU of 2hbj by Molmil
Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active site and the HRDC domain
分子名称: Exosome complex exonuclease RRP6
著者Midtgaard, S.F, Assenholt, J, Jonstrup, A.T, Van, L.B, Jensen, T.H, Brodersen, D.E.
登録日2006-06-14
公開日2006-07-25
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the nuclear exosome component Rrp6p reveals an interplay between the active site and the HRDC domain.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2HBK
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BU of 2hbk by Molmil
Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active site and the HRDC domain; Protein in complex with Mn
分子名称: Exosome complex exonuclease RRP6, MANGANESE (II) ION
著者Midtgaard, S.F, Assenholt, J, Jonstrup, A.T, Van, L.B, Jensen, T.H, Brodersen, D.E.
登録日2006-06-14
公開日2006-07-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of the nuclear exosome component Rrp6p reveals an interplay between the active site and the HRDC domain.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2HBL
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BU of 2hbl by Molmil
Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active site and the HRDC domain; Protein in complex with Mn, Zn, and AMP
分子名称: ADENOSINE MONOPHOSPHATE, Exosome complex exonuclease RRP6, MANGANESE (II) ION, ...
著者Midtgaard, S.F, Assenholt, J, Jonstrup, A.T, Van, L.B, Jensen, T.H, Brodersen, D.E.
登録日2006-06-14
公開日2006-07-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the nuclear exosome component Rrp6p reveals an interplay between the active site and the HRDC domain.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2P51
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BU of 2p51 by Molmil
Crystal structure of the S. pombe Pop2p deadenylation subunit
分子名称: MAGNESIUM ION, SPCC18.06c protein
著者Thyssen Jonstrup, A, Andersen, K.R, Van, L.B, Brodersen, D.E.
登録日2007-03-14
公開日2007-05-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The 1.4-A crystal structure of the S. pombe Pop2p deadenylase subunit unveils the configuration of an active enzyme
Nucleic Acids Res., 35, 2007
6TKT
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BU of 6tkt by Molmil
Structure of the bacterial toxin phenomycin
分子名称: Pre-phenomycin
著者Nielsen, J.T, Mulder, F.A.A, Toerring, T, Poulsen, T.
登録日2019-11-28
公開日2020-01-22
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structure and Function of the Bacterial Protein Toxin Phenomycin.
Structure, 28, 2020
6THH
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BU of 6thh by Molmil
Crystal structure of type I-D CRISPR-Cas nuclease Cas10d in complex with the SIRV3 AcrID1 (gp02) anti-CRISPR protein
分子名称: CRISPR-associated protein, CscA, PHOSPHATE ION, ...
著者Manav, M.C, Brodersen, D.E.
登録日2019-11-20
公開日2020-10-28
最終更新日2021-06-30
実験手法X-RAY DIFFRACTION (3.48 Å)
主引用文献Structural basis for inhibition of an archaeal CRISPR-Cas type I-D large subunit by an anti-CRISPR protein.
Nat Commun, 11, 2020
4XB6
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BU of 4xb6 by Molmil
Structure of the E. coli C-P lyase core complex
分子名称: Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase, Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG, Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH, ...
著者Brodersen, D.E.
登録日2014-12-16
公開日2015-08-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural insights into the bacterial carbon-phosphorus lyase machinery.
Nature, 525, 2015
4PC2
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BU of 4pc2 by Molmil
Elongation factor Tu:Ts complex with a bound GDP
分子名称: CHLORIDE ION, Elongation factor Ts, Elongation factor Tu, ...
著者Thirup, S.S.
登録日2014-04-14
公開日2015-05-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1999 Å)
主引用文献Structural outline of the detailed mechanism for elongation factor Ts-mediated guanine nucleotide exchange on elongation factor Tu.
J.Struct.Biol., 191, 2015
4PC3
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BU of 4pc3 by Molmil
Elongation factor Tu:Ts complex with partially bound GDP
分子名称: Elongation factor Ts, Elongation factor Tu 1, GLYCEROL, ...
著者Thirup, S.S.
登録日2014-04-14
公開日2015-05-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8313 Å)
主引用文献Structural outline of the detailed mechanism for elongation factor Ts-mediated guanine nucleotide exchange on elongation factor Tu.
J.Struct.Biol., 191, 2015
4PC7
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BU of 4pc7 by Molmil
Elongation factor Tu:Ts complex in a near GTP conformation.
分子名称: (1S,2S,3E,5E,7E,10S,11S,12S)-12-[(2R,4E,6E,8Z,10R,12E,14E,16Z,18S,19Z)-10,18-DIHYDROXY-12,16,19-TRIMETHYL-11,22-DIOXOOX ACYCLODOCOSA-4,6,8,12,14,16,19-HEPTAEN-2-YL]-2,11-DIHYDROXY-1,10-DIMETHYL-9-OXOTRIDECA-3,5,7-TRIEN-1-YL 6-DEOXY-2,4-DI-O-METHYL-BETA-L-GALACTOPYRANOSIDE, Elongation factor Ts, Elongation factor Tu 1, ...
著者Thirup, S.S.
登録日2014-04-14
公開日2015-05-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.6003 Å)
主引用文献Structural outline of the detailed mechanism for elongation factor Ts-mediated guanine nucleotide exchange on elongation factor Tu.
J.Struct.Biol., 191, 2015
4PC1
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BU of 4pc1 by Molmil
Elongation Factor Tu:Ts complex with a bound phosphate
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Elongation factor Ts, Elongation factor Tu, ...
著者Thirup, S.S.
登録日2014-04-14
公開日2015-05-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural outline of the detailed mechanism for elongation factor Ts-mediated guanine nucleotide exchange on elongation factor Tu.
J.Struct.Biol., 191, 2015
4PC6
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BU of 4pc6 by Molmil
Elongation factor Tu:Ts complex with bound GDPNP
分子名称: Elongation factor Ts, Elongation factor Tu, GLYCEROL, ...
著者Thirup, S.S.
登録日2014-04-14
公開日2015-05-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural outline of the detailed mechanism for elongation factor Ts-mediated guanine nucleotide exchange on elongation factor Tu.
J.Struct.Biol., 191, 2015

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