6IF6
 
 | | Structure of the periplasmic domain of SflA | | 分子名称: | GLYCEROL, PHOSPHATE ION, Protein SflA | | 著者 | Nishikawa, S, Sakuma, M, Kojima, S, Homma, M, Imada, K. | | 登録日 | 2018-09-18 | | 公開日 | 2019-05-01 | | 最終更新日 | 2024-03-27 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Structure of the periplasmic domain of SflA involved in spatial regulation of the flagellar biogenesis of Vibrio reveals a TPR/SLR-like fold.
J.Biochem., 166, 2019
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3W0D
 | | Structure of elastase inhibitor AFUEI (cyrstal form I) | | 分子名称: | Elastase inhibitor AFUEI | | 著者 | Imada, K, Sakuma, M, Okumura, Y, Ogawa, K, Nikai, T, Homma, M. | | 登録日 | 2012-10-29 | | 公開日 | 2013-05-15 | | 最終更新日 | 2013-07-03 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | X-ray Structure Analysis and Characterization of AFUEI, an Elastase Inhibitor from Aspergillus fumigatus
J.Biol.Chem., 288, 2013
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3W0E
 | | Structure of elastase inhibitor AFUEI (crystal form II) | | 分子名称: | Elastase inhibitor AFUEI | | 著者 | Imada, K, Sakuma, M, Okumura, Y, Ogawa, K, Nikai, T, Homma, M. | | 登録日 | 2012-10-29 | | 公開日 | 2013-05-15 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | X-ray Structure Analysis and Characterization of AFUEI, an Elastase Inhibitor from Aspergillus fumigatus
J.Biol.Chem., 288, 2013
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2D4U
 | | Crystal Structure of the ligand binding domain of the bacterial serine chemoreceptor Tsr | | 分子名称: | Methyl-accepting chemotaxis protein I | | 著者 | Imada, K, Tajima, H, Namba, K, Sakuma, M, Homma, M, Kawagishi, I. | | 登録日 | 2005-10-24 | | 公開日 | 2006-11-14 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | Ligand specificity determined by differentially arranged common ligand-binding residues in the bacterial amino acid chemoreceptors Tsr and Tar.
J.Biol.Chem., 2011
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6AHP
 | | Structure of the 58-167 fragment of FliL | | 分子名称: | Flagellar protein FliL | | 著者 | Takekawa, N, Isumi, M, Sakuma, M, Kojima, S, Homma, M, Imada, K. | | 登録日 | 2018-08-20 | | 公開日 | 2019-03-06 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Structure ofVibrioFliL, a New Stomatin-like Protein That Assists the Bacterial Flagellar Motor Function.
MBio, 10, 2019
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6AHQ
 | | Structure of the 40-167 fragment of FliL | | 分子名称: | Flagellar protein FliL | | 著者 | Takekawa, N, Isumi, M, Sakuma, M, Kojima, S, Homma, M, Imada, K. | | 登録日 | 2018-08-20 | | 公開日 | 2019-03-06 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (3.398 Å) | | 主引用文献 | Structure ofVibrioFliL, a New Stomatin-like Protein That Assists the Bacterial Flagellar Motor Function.
MBio, 10, 2019
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5Y3Z
 | | Structure of the periplasmic domain of the MotB L119P mutant from Salmonella (crystal form 1) | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, ARGININE, IMIDAZOLE, ... | | 著者 | Takao, M, Kojima, S, Sakuma, M, Homma, M, Imada, K. | | 登録日 | 2017-07-31 | | 公開日 | 2018-04-11 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | The Helix Rearrangement in the Periplasmic Domain of the Flagellar Stator B Subunit Activates Peptidoglycan Binding and Ion Influx.
Structure, 26, 2018
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5Y40
 | | Structure of the periplasmic domain of the MotB L119P mutant from Salmonella (crystal form 2) | | 分子名称: | Motility protein B | | 著者 | Takao, M, Kojima, S, Sakuma, M, Homma, M, Imada, K. | | 登録日 | 2017-07-31 | | 公開日 | 2018-04-11 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | The Helix Rearrangement in the Periplasmic Domain of the Flagellar Stator B Subunit Activates Peptidoglycan Binding and Ion Influx.
Structure, 26, 2018
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3WPW
 | | Structure of PomBc5, a periplasmic fragment of PomB from Vibrio | | 分子名称: | ACETATE ION, PomB | | 著者 | Takao, M, Sakuma, M, Zhu, S, Homma, M, Kojima, S, Imada, K. | | 登録日 | 2014-01-17 | | 公開日 | 2014-09-10 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Conformational change in the periplasmic region of the flagellar stator coupled with the assembly around the rotor
Proc. Natl. Acad. Sci. U.S.A., 111, 2014
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3WPX
 | | Structure of PomBc4, a periplasmic fragment of PomB from Vibrio alginolyticus | | 分子名称: | PomB | | 著者 | Takao, M, Sakuma, M, Zhu, S, Homma, M, Kojima, S, Imada, K. | | 登録日 | 2014-01-17 | | 公開日 | 2014-09-10 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Conformational change in the periplasmic region of the flagellar stator coupled with the assembly around the rotor
Proc. Natl. Acad. Sci. U.S.A., 111, 2014
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3W1E
 | | Structure of FlgT, a flagellar basal body component protein | | 分子名称: | Flagella basal-body protein | | 著者 | Terashima, H, Sakuma, M, Homma, M, Imada, K. | | 登録日 | 2012-11-14 | | 公開日 | 2013-04-03 | | 最終更新日 | 2013-08-14 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Insight into the assembly mechanism in the supramolecular rings of the sodium-driven Vibrio flagellar motor from the structure of FlgT
Proc.Natl.Acad.Sci.USA, 110, 2013
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7CIK
 | | Structure of the 58-213 fragment of FliF | | 分子名称: | (4R)-2-METHYLPENTANE-2,4-DIOL, Flagellar M-ring protein | | 著者 | Takekawa, T, Sakuma, M, Kojima, S, Homma, M, Imada, K. | | 登録日 | 2020-07-07 | | 公開日 | 2021-02-17 | | 最終更新日 | 2021-09-01 | | 実験手法 | X-RAY DIFFRACTION (2.29 Å) | | 主引用文献 | Two Distinct Conformations in 34 FliF Subunits Generate Three Different Symmetries within the Flagellar MS-Ring.
Mbio, 12, 2021
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3ATP
 | | Structure of the ligand binding domain of the bacterial serine chemoreceptor Tsr with ligand | | 分子名称: | Methyl-accepting chemotaxis protein I, SERINE | | 著者 | Tajima, H, Sakuma, M, Homma, K, Kawagishi, I, Imada, K. | | 登録日 | 2011-01-07 | | 公開日 | 2011-10-19 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Ligand specificity determined by differentially arranged common ligand-binding residues in bacterial amino acid chemoreceptors Tsr and Tar.
J.Biol.Chem., 286, 2011
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7Y6L
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7Y6N
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7X93
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7X95
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7X94
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7X96
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8J2X
 | | Saccharothrix syringae photocobilins protein, light state | | 分子名称: | BILIVERDINE IX ALPHA, COBALAMIN, Cobalamin-binding protein, ... | | 著者 | Zhang, S, Poddar, H, Levy, C, Leys, D. | | 登録日 | 2023-04-15 | | 公開日 | 2024-04-10 | | 実験手法 | X-RAY DIFFRACTION (1.98 Å) | | 主引用文献 | Photocobilins integrate B12 and bilin photochemistry for enzyme control.
Nat Commun, 15, 2024
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8J2Y
 | | Acidimicrobiaceae bacterium photocobilins protein, dark state | | 分子名称: | 5'-DEOXYADENOSINE, COBALAMIN, DI(HYDROXYETHYL)ETHER, ... | | 著者 | Zhang, S, Poddar, H, Levy, W.C, Leys, D. | | 登録日 | 2023-04-15 | | 公開日 | 2024-04-10 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Photocobilins integrate B12 and bilin photochemistry for enzyme control.
Nat Commun, 15, 2024
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8J2W
 | | Saccharothrix syringae photocobilins protein, dark state | | 分子名称: | 1,4-DIETHYLENE DIOXIDE, 5'-DEOXYADENOSINE, BILIVERDINE IX ALPHA, ... | | 著者 | Zhang, S, Poddar, H, Levy, W.C, Leys, D. | | 登録日 | 2023-04-15 | | 公開日 | 2024-04-10 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Photocobilins integrate B12 and bilin photochemistry for enzyme control.
Nat Commun, 15, 2024
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6R48
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6RNV
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6R46
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