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1WW9
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BU of 1ww9 by Molmil
Crystal structure of the terminal oxygenase component of carbazole 1,9a-dioxygenase, a non-heme iron oxygenase system catalyzing the novel angular dioxygenation for carbazole and dioxin
分子名称: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, terminal oxygenase component of carbazole
著者Nojiri, H, Ashikawa, Y, Noguchi, H, Nam, J.-W, Urata, M, Fujimoto, Z, Mizuno, H, Yoshida, T, Habe, H, Omori, T.
登録日2005-01-05
公開日2005-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of the terminal oxygenase component of angular dioxygenase, carbazole 1,9a-dioxygenase
J.Mol.Biol., 351, 2005
1IUP
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BU of 1iup by Molmil
meta-Cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) S103A mutant complexed with isobutyrates
分子名称: 2-METHYL-PROPIONIC ACID, meta-Cleavage product hydrolase
著者Fushinobu, S, Saku, T, Hidaka, M, Jun, S.-Y, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
登録日2002-03-06
公開日2002-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002
1IUO
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BU of 1iuo by Molmil
meta-Cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) S103A mutant complexed with acetates
分子名称: ACETATE ION, meta-Cleavage product hydrolase
著者Fushinobu, S, Saku, T, Hidaka, M, Jun, S.-Y, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
登録日2002-03-06
公開日2002-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002
1IUN
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BU of 1iun by Molmil
meta-Cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) S103A mutant hexagonal
分子名称: ACETATE ION, meta-Cleavage product hydrolase
著者Fushinobu, S, Saku, T, Hidaka, M, Jun, S.-Y, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
登録日2002-03-06
公開日2002-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002
2D0D
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BU of 2d0d by Molmil
Crystal Structure of a Meta-cleavage Product Hydrolase (CumD) A129V Mutant
分子名称: 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, CHLORIDE ION, PHOSPHATE ION
著者Jun, S.Y, Fushinobu, S, Nojiri, H, Omori, T, Shoun, H, Wakagi, T.
登録日2005-08-01
公開日2006-06-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Improving the catalytic efficiency of a meta-cleavage product hydrolase (CumD) from Pseudomonas fluorescens IP01
Biochim.Biophys.Acta, 1764, 2006
5B52
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BU of 5b52 by Molmil
Crystal structure of the N-terminal domain of H-NS family protein TurB
分子名称: H-NS family protein MvaT
著者Suzuki-Minakuchi, C, Nojiri, H.
登録日2016-04-21
公開日2016-10-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural similarities and differences in H-NS family proteins revealed by the N-terminal structure of TurB in Pseudomonas putida KT2440
Febs Lett., 590, 2016
8H8H
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BU of 8h8h by Molmil
Crystal structure of the N-terminal domain of H-NS family protein TurB (TurB_nt50)
分子名称: H-NS family protein MvaT
著者Vasileva, D, Suzuki-Minakuchi, C, Arakawa, T, Nojiri, H.
登録日2022-10-22
公開日2022-11-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the N-terminal domain of H-NS family protein TurB (TurB_nt50)
To Be Published
1J1I
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BU of 1j1i by Molmil
Crystal structure of a His-tagged Serine Hydrolase Involved in the Carbazole Degradation (CarC enzyme)
分子名称: meta cleavage compound hydrolase
著者Habe, H, Morii, K, Fushinobu, S, Nam, J.W, Ayabe, Y, Yoshida, T, Wakagi, T, Yamane, H, Nojiri, H, Omori, T.
登録日2002-12-05
公開日2003-06-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Crystal structure of a histidine-tagged serine hydrolase involved in the carbazole degradation (CarC enzyme).
Biochem.Biophys.Res.Commun., 303, 2003
2DE7
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BU of 2de7 by Molmil
The substrate-bound complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
分子名称: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Ashikawa, Y, Nojiri, H.
登録日2006-02-08
公開日2006-12-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Electron Transfer Complex Formation between Oxygenase and Ferredoxin Components in Rieske Nonheme Iron Oxygenase System
Structure, 14, 2006
2DE5
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BU of 2de5 by Molmil
Crystal structure of the electron transfer complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
分子名称: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ferredoxin component of carbazole, ...
著者Ashikawa, Y, Nojiri, H.
登録日2006-02-08
公開日2006-12-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Electron Transfer Complex Formation between Oxygenase and Ferredoxin Components in Rieske Nonheme Iron Oxygenase System
Structure, 14, 2006
2DE6
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BU of 2de6 by Molmil
The reduced complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
分子名称: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ferredoxin component of carbazole, ...
著者Ashikawa, Y, Nojiri, H.
登録日2006-02-08
公開日2006-12-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Electron Transfer Complex Formation between Oxygenase and Ferredoxin Components in Rieske Nonheme Iron Oxygenase System
Structure, 14, 2006
3GKQ
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BU of 3gkq by Molmil
Terminal oxygenase of carbazole 1,9a-dioxygenase from Novosphingobium sp. KA1
分子名称: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Terminal oxygenase component of carbazole 1,9a-dioxygenase
著者Umeda, T, Nojiri, H.
登録日2009-03-11
公開日2010-03-31
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Specific interaction via putidaredoxin-type ferredoxin in carbazole 1,9a-dioxygenase from Novosphingobium sp. KA1
To be Published
3GCE
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BU of 3gce by Molmil
Ferredoxin of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177
分子名称: FE2/S2 (INORGANIC) CLUSTER, Ferredoxin component of carbazole 1,9a-dioxygenase
著者Inoue, K, Nojiri, H.
登録日2009-02-22
公開日2009-09-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Specific Interactions between the ferredoxin and terminal oxygenase components of a class IIB Rieske nonheme iron oxygenase, carbazole 1,9a-dioxygenase.
J.Mol.Biol., 392, 2009
3GCF
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BU of 3gcf by Molmil
Terminal oxygenase of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177
分子名称: CHLORIDE ION, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Inoue, K, Nojiri, H.
登録日2009-02-22
公開日2009-09-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Specific Interactions between the ferredoxin and terminal oxygenase components of a class IIB Rieske nonheme iron oxygenase, carbazole 1,9a-dioxygenase.
J.Mol.Biol., 392, 2009
7BUH
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BU of 7buh by Molmil
Reduced ferredoxin of carbazole 1,9a-dioxygenase
分子名称: 1,2-ETHANEDIOL, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin CarAc, ...
著者Matsuzawa, J, Wang, Y.X, Suzuki-Minakuchi, C, Nojiri, H.
登録日2020-04-06
公開日2021-04-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Reduced ferredoxin of carbazole 1,9a-dioxygenase
To Be Published
7BUI
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BU of 7bui by Molmil
Complex of reduced oxygenase and oxidized ferredoxin in carbazole 1,9a- dioxygenase
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, FE (II) ION, ...
著者Matsuzawa, J, Wang, Y.X, Suzuki-Minakuchi, C, Nojiri, H.
登録日2020-04-06
公開日2021-04-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Complex of reduced oxygenase and oxidized ferredoxin in carbazole 1,9a- dioxygenase
To Be Published
7BUG
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BU of 7bug by Molmil
Reduced oxygenase of carbazole 1,9a-dioxygenase
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 2-METHOXYETHANOL, CARBONATE ION, ...
著者Matsuzawa, J, Wang, Y.X, Suzuki-Minakuchi, C, Nojiri, H.
登録日2020-04-06
公開日2021-04-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Reduced oxygenase of carbazole 1,9a-dioxygenase
To Be Published
7C3A
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BU of 7c3a by Molmil
Ferredoxin reductase in carbazole 1,9a-dioxygenase
分子名称: CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Ashikawa, Y, Fujimoto, Z, Nojiri, H.
登録日2020-05-11
公開日2021-05-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the ferredoxin reductase component of carbazole 1,9a-dioxygenase from Janthinobacterium sp. J3.
Acta Crystallogr D Struct Biol, 77, 2021
7C3B
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BU of 7c3b by Molmil
Ferredoxin reductase in carbazole 1,9a-dioxygenase (FAD apo form)
分子名称: ACETATE ION, CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Ashikawa, Y, Fujimoto, Z, Nojiri, H.
登録日2020-05-11
公開日2021-05-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the ferredoxin reductase component of carbazole 1,9a-dioxygenase from Janthinobacterium sp. J3.
Acta Crystallogr D Struct Biol, 77, 2021
1VCK
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BU of 1vck by Molmil
Crystal structure of ferredoxin component of carbazole 1,9a-dioxygenase of Pseudomonas resinovorans strain CA10
分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, HYDROSULFURIC ACID, ...
著者Nam, J.-W, Noguchi, H, Fujiomoto, Z, Mizuno, H, Fushinobu, S, Kobashi, N, Iwata, K, Yoshida, T, Habe, H, Yamane, H, Omori, T, Nojiri, H.
登録日2004-03-09
公開日2005-03-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the ferredoxin component of carbazole 1,9a-dioxygenase of Pseudomonas resinovorans strain CA10, a novel Rieske non-heme iron oxygenase system
PROTEINS, 58, 2005
3VMI
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BU of 3vmi by Molmil
Carbazole- and oxygen-bound complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
分子名称: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Ashikawa, Y, Nojiri, H.
登録日2011-12-12
公開日2012-08-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insight into the substrate- and dioxygenbinding manner in the catalytic cycle of rieske nonheme iron oxygenase system, carbazole 1,9adioxygenase
Bmc Struct.Biol., 12, 2012
3VMH
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BU of 3vmh by Molmil
Oxygen-bound complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
分子名称: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin component of carbazole, ...
著者Ashikawa, Y, Nojiri, H.
登録日2011-12-12
公開日2012-08-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural insight into the substrate- and dioxygenbinding manner in the catalytic cycle of rieske nonheme iron oxygenase system, carbazole 1,9adioxygenase
Bmc Struct.Biol., 12, 2012
3VMG
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BU of 3vmg by Molmil
Reduced carbazole-bound complex between oxygenase and ferredoxin in carbazole 1,9a-dioxygenase
分子名称: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Ashikawa, Y, Nojiri, H.
登録日2011-12-12
公開日2012-08-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural insight into the substrate- and dioxygenbinding manner in the catalytic cycle of rieske nonheme iron oxygenase system, carbazole 1,9adioxygenase
Bmc Struct.Biol., 12, 2012
4NBB
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BU of 4nbb by Molmil
Carbazole- and oxygen-bound oxygenase with Ile262 replaced by Val and ferredoxin complex of carbazole 1,9a-dioxygenase
分子名称: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
登録日2013-10-23
公開日2014-03-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NBH
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Carbazole-bound Oxygenase with Gln282 replaced by Tyr and ferredoxin complex of carbazole 1,9a-dioxygenase
分子名称: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
登録日2013-10-23
公開日2014-03-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014

 

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