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1FV7
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BU of 1fv7 by Molmil
A TWO B-Z JUNCTION CONTAINING DNA RESOLVES INTO AN ALL RIGHT HANDED DOUBLE HELIX
分子名称: 5'-D(*(5CM)P*GP*(5CM)P*GP*(0DC)P*(0DG)P*(5CM)P*GP*(5CM)P*G)-3'
著者Mauffret, O, El Amri, C, Santamaria, F, Tevanian, G, Rayner, B, Fermandjian, S.
登録日2000-09-19
公開日2000-10-11
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A two B-Z junction containing DNA resolves into an all right-handed double-helix.
Nucleic Acids Res., 28, 2000
1R4D
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BU of 1r4d by Molmil
Solution structure of the chimeric L/D DNA oligonucleotide d(C8metGCGC(L)G(L)CGCG)2
分子名称: 5'-D(*CP*(8MG)P*CP*GP*(0DC)P*(0DG)P*CP*GP*CP*G)-3'
著者Cherrak, I, Mauffret, O, Santamaria, F, Rayner, B, Hocquet, A, Ghomi, M, Fermandjian, S.
登録日2003-10-06
公開日2003-10-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献L-nucleotides and 8-methylguanine of d(C1m8G2C3G4C5LG6LC7G8C9G10)2 act cooperatively to promote a left-handed helix under physiological salt conditions.
Nucleic Acids Res., 31, 2003
1TQR
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BU of 1tqr by Molmil
NMR Structure of DNA 17-mer GGAAAATCTCTAGCAGT corresponding to the extremity of the U5 LTR of the HIV-1 genome
分子名称: DNA HIV-1 U5 LTR extremity
著者Renisio, J.G, Cosquer, S, Cherrak, I, El Antri, S, Mauffret, O, Fermandjian, S.
登録日2004-06-18
公開日2005-04-19
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Pre-organized structure of viral DNA at the binding-processing site of HIV-1 integrase
NUCLEIC ACIDS RES., 33, 2005
1CS2
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BU of 1cs2 by Molmil
NMR STRUCTURES OF B-DNA D(CTACTGCTTTAG).D(CTAAAGCAGTAG)
分子名称: 5'-d(*CP*TP*AP*AP*AP*GP*CP*AP*GP*TP*AP*G)-3', 5'-d(*CP*TP*AP*CP*TP*GP*CP*TP*TP*TP*AP*G)-3'
著者Leporc, S, Mauffret, O, Tevanian, G, Lescot, E, Monnot, M, Fermandjian, S.
登録日1999-08-16
公開日1999-08-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献An NMR and molecular modelling analysis of d(CTACTGCTTTAG). d(CTAAAGCAGTAG) reveals that the particular behaviour of TpA steps is related to edge-to-edge contacts of their base-pairs in the major groove
Nucleic Acids Res., 27, 1999
2L4L
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BU of 2l4l by Molmil
Structural insights into the cTAR DNA recognition by the HIV-1 Nucleocapsid protein: role of sugar deoxyriboses in the binding polarity of NC
分子名称: 5'-D(*CP*TP*GP*G)-3', HIV-1 nucleocapsid protein NCp7, ZINC ION
著者Bazzi, A, Zargarian, L, Chaminade, F, Boudier, C, De Rocquigny, H, Rene, B, Mely, Y, Fosse, P, Mauffret, O.
登録日2010-10-08
公開日2010-12-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural insights into the cTAR DNA recognition by the HIV-1 nucleocapsid protein: role of sugar deoxyriboses in the binding polarity of NC.
Nucleic Acids Res., 39, 2011
2JYK
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BU of 2jyk by Molmil
NMR Structure of a 21 bp DNA duplex preferentially cleaved by Human Topoisomerase II
分子名称: DNA (5'-D(*DAP*DCP*DAP*DGP*DCP*DTP*DTP*DAP*DTP*DCP*DAP*DTP*DCP*DGP*DAP*DTP*DCP*DAP*DCP*DGP*DT)-3'), DNA (5'-D(*DAP*DCP*DGP*DTP*DGP*DAP*DTP*DCP*DGP*DAP*DTP*DGP*DAP*DTP*DAP*DAP*DGP*DCP*DTP*DGP*DT)-3')
著者Masliah, G, Mauffret, O.
登録日2007-12-14
公開日2008-07-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Identification of intrinsic dynamics in a DNA sequence preferentially cleaved by topoisomerase II enzyme
J.Mol.Biol., 381, 2008
1FV8
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BU of 1fv8 by Molmil
NMR STUDY OF AN HETEROCHIRAL HAIRPIN
分子名称: 5'-D(*TP*AP*TP*CP*AP*(0DT)P*CP*GP*AP*TP*A)-3'
著者El Amri, C, Mauffret, O, Santamaria, F, Rayner, B, Fermandjian, S.
登録日2000-09-19
公開日2000-10-11
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献NMR study of a heterochiral DNA hairpin:impact of L-enantiomery in the loop.
J.Biomol.Struct.Dyn., 19, 2001
8PN1
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BU of 8pn1 by Molmil
CryoEM structure of Nal1 protein, allele SPIKE, from Oryza sativa japonica group
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-29
公開日2024-04-17
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PMI
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BU of 8pmi by Molmil
Structure of Nal1 indica cultivar IR64, construct 36-458 in presence of peptide from FZP protein
分子名称: ADENOSINE-5'-TRIPHOSPHATE, AMMONIUM ION, MAGNESIUM ION, ...
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-28
公開日2024-04-17
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PME
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BU of 8pme by Molmil
Structure of Nal1 indica cultivar IR64, construct 88-458
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Narrow leaf 1, ...
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-28
公開日2024-04-17
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PMG
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BU of 8pmg by Molmil
Structure of Nal1 indica cultivar IR64, construct 36-458
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-28
公開日2024-04-17
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PML
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BU of 8pml by Molmil
Structure of Nal1 protein , SPIKE allele from japonica rice, construct 46-458
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-29
公開日2024-04-17
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PN2
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BU of 8pn2 by Molmil
CryoEM structure of Nal1 protein, allele IR64, from Oryza sativa indica cultivar
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-29
公開日2024-04-17
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PMM
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BU of 8pmm by Molmil
Structure of Nal1 protein, allele SPIKE from japonica rice, construct 31-458
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-29
公開日2024-04-17
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024

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件を2024-07-24に公開中

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