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4OLT
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BU of 4olt by Molmil
Chitosanase complex structure
分子名称: 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose, Chitosanase, GLYCEROL
著者Liu, W.Z, Lyu, Q.Q, Han, B.Q.
登録日2014-01-25
公開日2014-04-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structural insights into the substrate-binding mechanism for a novel chitosanase.
Biochem.J., 461, 2014
5Z9T
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BU of 5z9t by Molmil
a new PL6 alginate lyase complex with trisaccharide
分子名称: GLYCEROL, MALONATE ION, SODIUM ION, ...
著者Liu, W.Z, Lyu, Q.Q, Zhang, K.K, Li, Z.J.
登録日2018-02-05
公開日2019-03-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into a novel Ca2+-independent PL-6 alginate lyase from Vibrio OU02 identify the possible subsites responsible for product distribution.
Biochim Biophys Acta Gen Subj, 1863, 2019
6A40
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BU of 6a40 by Molmil
complex structure of Alginate lyase AlyF-OU02 with G4
分子名称: alginate lyase AlyF-OU02, alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid
著者Liu, W.Z, Lyu, Q.Q, Zhang, K.K.
登録日2018-06-18
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into a novel Ca2+-independent PL-6 alginate lyase from Vibrio OU02 identify the possible subsites responsible for product distribution.
Biochim Biophys Acta Gen Subj, 1863, 2019
7W16
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BU of 7w16 by Molmil
Complex structure of alginate lyase AlyV with M8
分子名称: GLYCEROL, alginate lyase, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid
著者Liu, W.Z, Lyu, Q.Q, Li, Z.J, Zhang, K.K.
登録日2021-11-19
公開日2022-08-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Determination of oligosaccharide product distributions of PL7 alginate lyases by their structural elements.
Commun Biol, 5, 2022
7W13
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BU of 7w13 by Molmil
Complex structure of alginate lyase PyAly with M8
分子名称: Alginate lyase, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid
著者Liu, W.Z, Lyu, Q.Q, Li, Z.J, Zhang, K.K.
登録日2021-11-19
公開日2022-08-17
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Determination of oligosaccharide product distributions of PL7 alginate lyases by their structural elements.
Commun Biol, 5, 2022
7W12
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BU of 7w12 by Molmil
Complex structure of alginate lyase AlyB-OU02 with G9
分子名称: Alginate lyase, SULFATE ION, alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid
著者Liu, W.Z, Lyu, Q.Q, Zhang, K.K.
登録日2021-11-19
公開日2022-11-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Determination of oligosaccharide product distributions of PL7 alginate lyases by their structural elements.
Commun Biol, 5, 2022
6ITG
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BU of 6itg by Molmil
a new alginate lyase (PL6) from Vibrio splendidus OU02
分子名称: Alginate lyase, GLYCEROL, MALONATE ION
著者Liu, W.Z, Lyu, Q.Q.
登録日2018-11-23
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structural insights into a novel Ca2+-independent PL-6 alginate lyase from Vibrio OU02 identify the possible subsites responsible for product distribution.
Biochim Biophys Acta Gen Subj, 1863, 2019
7W18
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BU of 7w18 by Molmil
Complex structure of alginate lyase PyAly with M5
分子名称: Alginate lyase, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid
著者Liu, W.Z, Lyu, Q.Q, Zhang, K.K.
登録日2021-11-19
公開日2022-08-17
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Determination of oligosaccharide product distributions of PL7 alginate lyases by their structural elements.
Commun Biol, 5, 2022
4U3Q
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BU of 4u3q by Molmil
Crystal Structure of Recombinant TP0435 from Treponema pallidum
分子名称: 17 kDa lipoprotein
著者Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2014-07-22
公開日2014-10-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Insights into the potential function and membrane organization of the TP0435 (Tp17) lipoprotein from Treponema pallidum derived from structural and biophysical analyses.
Protein Sci., 24, 2015
1GLF
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BU of 1glf by Molmil
CRYSTAL STRUCTURES OF ESCHERICHIA COLI GLYCEROL KINASE AND THE MUTANT A65T IN AN INACTIVE TETRAMER: CONFORMATIONAL CHANGES AND IMPLICATIONS FOR ALLOSTERIC REGULATION
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, PHOSPHATE ION, ...
著者Feese, M.D, Faber, H.R, Bystrom, C.E, Pettigrew, D.W, Remington, S.J.
登録日1998-08-30
公開日1998-10-16
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Glycerol kinase from Escherichia coli and an Ala65-->Thr mutant: the crystal structures reveal conformational changes with implications for allosteric regulation.
Structure, 6, 1998
7JP2
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BU of 7jp2 by Molmil
Crystal structure of TP0037 from Treponema pallidum, a D-lactate dehydrogenase
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, D-lactate dehydrogenase
著者Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2020-08-07
公開日2020-09-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Biophysical and Biochemical Characterization of TP0037, a d-Lactate Dehydrogenase, Supports an Acetogenic Energy Conservation Pathway in Treponema pallidum.
Mbio, 11, 2020
7MGT
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BU of 7mgt by Molmil
Ftp from Treponema pallidum bound to an ADP-like inhibitor
分子名称: 1,2-ETHANEDIOL, 2-chloroadenosine 5'-(trihydrogen diphosphate), FAD:protein FMN transferase, ...
著者Brautigam, C.A, Deka, R, Norgard, M.V.
登録日2021-04-13
公開日2021-12-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Inhibition of bacterial FMN transferase: A potential avenue for countering antimicrobial resistance.
Protein Sci., 31, 2022
5JX2
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BU of 5jx2 by Molmil
Crystal structure of MglB-2 (Tp0684) from Treponema pallidum
分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
著者Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2016-05-12
公開日2016-08-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.0504 Å)
主引用文献The Tp0684 (MglB-2) Lipoprotein of Treponema pallidum: A Glucose-Binding Protein with Divergent Topology.
Plos One, 11, 2016
5U2P
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BU of 5u2p by Molmil
The crystal structure of Tp0737 from Treponema pallidum
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, CHLORIDE ION, ...
著者Brautigam, C.A, Deka, R.K, Tomchick, D.R, Norgard, M.V.
登録日2016-11-30
公開日2017-02-22
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Functional clues from the crystal structure of an orphan periplasmic ligand-binding protein from Treponema pallidum.
Protein Sci., 26, 2017
4XHF
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BU of 4xhf by Molmil
Crystal structure of Shewanella oneidensis NqrC
分子名称: FLAVIN MONONUCLEOTIDE, Na-translocating NADH-quinone reductase subunit C NqrC, SODIUM ION
著者Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2015-01-05
公開日2015-12-16
最終更新日2016-03-16
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Molecular insights into the enzymatic diversity of flavin-trafficking protein (Ftp; formerly ApbE) in flavoprotein biogenesis in the bacterial periplasm.
Microbiologyopen, 5, 2016
4XDT
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BU of 4xdt by Molmil
Crystal structure of Treponema pallidum TP0796 Flavin trafficking protein, a bifunctional FMN transferase/FAD pyrophosphatase, N55Y mutant, FAD bound form
分子名称: 1,2-ETHANEDIOL, ACETATE ION, FAD:protein FMN transferase, ...
著者Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2014-12-19
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.452 Å)
主引用文献Evidence for Posttranslational Protein Flavinylation in the Syphilis Spirochete Treponema pallidum: Structural and Biochemical Insights from the Catalytic Core of a Periplasmic Flavin-Trafficking Protein.
Mbio, 6, 2015
4XGV
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BU of 4xgv by Molmil
Crystal structure of Escherichia coli Flavin trafficking protein, an FMN transferase
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2015-01-02
公開日2015-12-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.883 Å)
主引用文献Molecular insights into the enzymatic diversity of flavin-trafficking protein (Ftp; formerly ApbE) in flavoprotein biogenesis in the bacterial periplasm.
Microbiologyopen, 5, 2016
4XDU
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BU of 4xdu by Molmil
Crystal structure of Treponema pallidum TP0796 Flavin trafficking protein,a bifunctional FMN transferase/FAD pyrophosphatase, N55Y mutant, ADP bound form
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
著者Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2014-12-20
公開日2015-10-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Evidence for Posttranslational Protein Flavinylation in the Syphilis Spirochete Treponema pallidum: Structural and Biochemical Insights from the Catalytic Core of a Periplasmic Flavin-Trafficking Protein.
Mbio, 6, 2015
4XGX
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BU of 4xgx by Molmil
Crystal structure of Escherichia coli Flavin trafficking protein, an FMN transferase, Y60N mutant, ADP-inhibited
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, FAD:protein FMN transferase, ...
著者Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2015-01-02
公開日2015-12-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular insights into the enzymatic diversity of flavin-trafficking protein (Ftp; formerly ApbE) in flavoprotein biogenesis in the bacterial periplasm.
Microbiologyopen, 5, 2016
4XDR
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BU of 4xdr by Molmil
Crystal structure of Treponema pallidum TP0796 Flavin trafficking protein, a bifunctional FMN transferase/FAD pyrophosphatase, D284A mutant, ADN bound form
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE, ...
著者Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2014-12-19
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Evidence for Posttranslational Protein Flavinylation in the Syphilis Spirochete Treponema pallidum: Structural and Biochemical Insights from the Catalytic Core of a Periplasmic Flavin-Trafficking Protein.
Mbio, 6, 2015
4XGW
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BU of 4xgw by Molmil
Crystal structure of Escherichia coli Flavin trafficking protein, an FMN transferase, E169K mutant
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, FAD:protein FMN transferase, ...
著者Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2015-01-02
公開日2015-12-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.747 Å)
主引用文献Molecular insights into the enzymatic diversity of flavin-trafficking protein (Ftp; formerly ApbE) in flavoprotein biogenesis in the bacterial periplasm.
Microbiologyopen, 5, 2016
6BGD
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BU of 6bgd by Molmil
The crystal structure of the W145A variant of TpMglB-2 (Tp0684) with bound ligand
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Glucose/galactose-binding lipoprotein
著者Brautigam, C.A, Norgard, M.V, Deka, R.K.
登録日2017-10-27
公開日2018-01-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Crystal structures of MglB-2 (TP0684), a topologically variant d-glucose-binding protein from Treponema pallidum, reveal a ligand-induced conformational change.
Protein Sci., 27, 2018
6BGC
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BU of 6bgc by Molmil
The crystal structure of the W145A variant of TpMglB-2 (Tp0684) with bound glucose
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Glucose/galactose-binding lipoprotein, ...
著者Brautigam, C.A, Norgard, M.V, Deka, R.K.
登録日2017-10-27
公開日2018-01-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.082 Å)
主引用文献Crystal structures of MglB-2 (TP0684), a topologically variant d-glucose-binding protein from Treponema pallidum, reveal a ligand-induced conformational change.
Protein Sci., 27, 2018
6DET
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BU of 6det by Molmil
The crystal structure of Tv2483 bound to L-arginine
分子名称: ARGININE, Tv2483
著者Brautigam, C.A, Norgard, M.V.
登録日2018-05-13
公開日2019-03-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Biophysical insights into a highly selective l-arginine-binding lipoprotein of a pathogenic treponeme.
Protein Sci., 27, 2018
1BU6
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BU of 1bu6 by Molmil
CRYSTAL STRUCTURES OF ESCHERICHIA COLI GLYCEROL KINASE AND THE MUTANT A65T IN AN INACTIVE TETRAMER: CONFORMATIONAL CHANGES AND IMPLICATIONS FOR ALLOSTERIC REGULATION
分子名称: GLYCEROL, PROTEIN (GLYCEROL KINASE), SULFATE ION
著者Feese, M.D, Faber, H.R, Bystrom, C.E, Pettigrew, D.W, Remington, S.J.
登録日1998-08-30
公開日1998-09-16
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Glycerol kinase from Escherichia coli and an Ala65-->Thr mutant: the crystal structures reveal conformational changes with implications for allosteric regulation.
Structure, 6, 1998

 

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