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5IQ1
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BU of 5iq1 by Molmil
Crystal structure of RnTmm mutant Y207S
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-containing monooxygenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Li, C.Y, Zhang, Y.Z.
登録日2016-03-10
公開日2017-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural mechanism for bacterial oxidation of oceanic trimethylamine into trimethylamine N-oxide
Mol. Microbiol., 103, 2017
5IPY
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BU of 5ipy by Molmil
Crystal structure of WT RnTmm
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-containing monooxygenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Li, C.Y, Zhang, Y.Z.
登録日2016-03-10
公開日2017-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural mechanism for bacterial oxidation of oceanic trimethylamine into trimethylamine N-oxide
Mol. Microbiol., 103, 2017
4QFK
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BU of 4qfk by Molmil
Crystal structure of dipeptide binding protein from pseudoalteromonas sp. SM9913
分子名称: ABC transporter periplasmic peptide-binding protein
著者Li, C.Y, Zhang, Y.Z.
登録日2014-05-21
公開日2015-01-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.288 Å)
主引用文献Structural insights into the multispecific recognition of dipeptides of deep-sea gram-negative bacterium Pseudoalteromonas sp. strain SM9913
J. Bacteriol., 197, 2015
4QFL
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BU of 4qfl by Molmil
Crystal structure of dipeptide binding protein from pseudoalteromonas sp. SM9913 in complex with Ala-Phe
分子名称: ABC transporter periplasmic peptide-binding protein, ALANINE, GLYCEROL, ...
著者Li, C.Y, Zhang, Y.Z.
登録日2014-05-21
公開日2015-01-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.749 Å)
主引用文献Structural insights into the multispecific recognition of dipeptides of deep-sea gram-negative bacterium Pseudoalteromonas sp. strain SM9913
J. Bacteriol., 197, 2015
4QFO
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BU of 4qfo by Molmil
Crystal structure of dipeptide binding protein from pseudoalteromonas sp. SM9913 in complex with Met-Leu
分子名称: ABC transporter periplasmic peptide-binding protein, GLYCEROL, LEUCINE, ...
著者Li, C.Y, Zhang, Y.Z.
登録日2014-05-21
公開日2015-01-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.304 Å)
主引用文献Structural insights into the multispecific recognition of dipeptides of deep-sea gram-negative bacterium Pseudoalteromonas sp. strain SM9913
J. Bacteriol., 197, 2015
4QFN
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BU of 4qfn by Molmil
Crystal structure of dipeptide binding protein from pseudoalteromonas sp. SM9913 in complex with Gly-Glu
分子名称: ABC transporter periplasmic peptide-binding protein, GLUTAMIC ACID, GLYCINE
著者Li, C.Y, Zhang, Y.Z.
登録日2014-05-21
公開日2015-01-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.297 Å)
主引用文献Structural insights into the multispecific recognition of dipeptides of deep-sea gram-negative bacterium Pseudoalteromonas sp. strain SM9913
J. Bacteriol., 197, 2015
4QFP
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BU of 4qfp by Molmil
Crystal structure of dipeptide binding protein from pseudoalteromonas sp. SM9913 in complex with Val-Thr
分子名称: ABC transporter periplasmic peptide-binding protein, GLYCEROL, PHOSPHATE ION, ...
著者Li, C.Y, Zhang, Y.Z.
登録日2014-05-21
公開日2015-01-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Structural insights into the multispecific recognition of dipeptides of deep-sea gram-negative bacterium Pseudoalteromonas sp. strain SM9913
J. Bacteriol., 197, 2015
7CM9
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BU of 7cm9 by Molmil
DMSP lyase DddX
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DMSP lyase, SULFATE ION
著者Li, C.Y, Zhang, Y.Z.
登録日2020-07-25
公開日2021-05-19
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.249 Å)
主引用文献A novel ATP dependent dimethylsulfoniopropionate lyase in bacteria that releases dimethyl sulfide and acryloyl-CoA.
Elife, 10, 2021
5XKX
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BU of 5xkx by Molmil
Crystal structure of WT DddY
分子名称: ACETATE ION, Uncharacterized protein, ZINC ION
著者Li, C.Y, Zhang, Y.Z.
登録日2017-05-10
公開日2017-11-01
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mechanistic Insights into Dimethylsulfoniopropionate Lyase DddY, a New Member of the Cupin Superfamily.
J. Mol. Biol., 429, 2017
5XKY
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BU of 5xky by Molmil
Crystal structure of DddY Se derivative
分子名称: Uncharacterized protein, ZINC ION
著者Li, C.Y, Zhang, Y.Z.
登録日2017-05-10
公開日2017-11-01
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Mechanistic Insights into Dimethylsulfoniopropionate Lyase DddY, a New Member of the Cupin Superfamily.
J. Mol. Biol., 429, 2017
7WDW
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BU of 7wdw by Molmil
DsyB in complex with SAH and MTHB
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-methylsulfanyl-2-oxidanyl-butanoic acid, DSYB, ...
著者Li, C.Y.
登録日2021-12-22
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Mechanistic insights into the key marine dimethylsulfoniopropionate synthesis enzyme DsyB/DSYB.
Mlife, 2022
7WDQ
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BU of 7wdq by Molmil
DsyB in complex with SAM
分子名称: S-ADENOSYLMETHIONINE, SAM-dependent MTHB methyltransferase
著者Li, C.Y.
登録日2021-12-22
公開日2022-06-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Mechanistic insights into the key marine dimethylsulfoniopropionate synthesis enzyme DsyB/DSYB.
Mlife, 2022
7YLE
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BU of 7yle by Molmil
RnDmpX in complex with DMSP
分子名称: 3-(dimethyl-lambda~4~-sulfanyl)propanoic acid, Glycine betaine/proline ABC transporter, periplasmic glycinebetaine/proline-binding protein
著者Li, C.Y.
登録日2022-07-26
公開日2023-01-25
最終更新日2023-04-05
実験手法X-RAY DIFFRACTION (2.052 Å)
主引用文献Ubiquitous occurrence of a dimethylsulfoniopropionate ABC transporter in abundant marine bacteria.
Isme J, 17, 2023
7D4N
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BU of 7d4n by Molmil
Crystal structure of Tmm from strain HTCC7211 soaked with DMS for 20 min
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-containing monooxygenase FMO, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Li, C.Y, Zhang, Y.Z.
登録日2020-09-24
公開日2021-09-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Structural and Mechanistic Insights Into Dimethylsulfoxide Formation Through Dimethylsulfide Oxidation.
Front Microbiol, 12, 2021
7D4M
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BU of 7d4m by Molmil
Crystal structure of Tmm from strain HTCC7211 soaked with DMS for 5 min
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-containing monooxygenase FMO, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Li, C.Y, Zhang, Y.Z.
登録日2020-09-24
公開日2021-09-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.786 Å)
主引用文献Structural and Mechanistic Insights Into Dimethylsulfoxide Formation Through Dimethylsulfide Oxidation.
Front Microbiol, 12, 2021
7D4K
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BU of 7d4k by Molmil
Crystal structure of Tmm from Pelagibacter sp. strain HTCC7211
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-containing monooxygenase FMO, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Li, C.Y, Zhang, Y.Z.
登録日2020-09-24
公開日2021-09-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and Mechanistic Insights Into Dimethylsulfoxide Formation Through Dimethylsulfide Oxidation.
Front Microbiol, 12, 2021
5IQ4
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BU of 5iq4 by Molmil
Crystal structure of RnTmm mutant Y207S soaking
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-containing monooxygenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Zhang, Y.Z, Li, C.Y.
登録日2016-03-10
公開日2017-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural mechanism for bacterial oxidation of oceanic trimethylamine into trimethylamine N-oxide
Mol. Microbiol., 103, 2017
5GSN
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BU of 5gsn by Molmil
Tmm in complex with methimazole
分子名称: 1-METHYL-1,3-DIHYDRO-2H-IMIDAZOLE-2-THIONE, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-containing monooxygenase, ...
著者Zhang, Y.Z, Li, C.Y.
登録日2016-08-16
公開日2017-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.203 Å)
主引用文献Structural mechanism for bacterial oxidation of oceanic trimethylamine into trimethylamine N-oxide
Mol. Microbiol., 103, 2017
7CQQ
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BU of 7cqq by Molmil
GmaS in complex with AMPPNP and MetSox
分子名称: (2S)-2-AMINO-4-(METHYLSULFONIMIDOYL)BUTANOIC ACID, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Li, C.Y, Zhang, Y.Z.
登録日2020-08-11
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.295 Å)
主引用文献Crystal structures of gamma-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine.
J.Biol.Chem., 296, 2020
7CQL
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BU of 7cql by Molmil
Apo GmaS without ligand
分子名称: Type III glutamate--ammonia ligase
著者Li, C.Y, Zhang, Y.Z.
登録日2020-08-11
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Crystal structures of gamma-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine.
J.Biol.Chem., 296, 2020
7CQN
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BU of 7cqn by Molmil
GmaS in complex with AMPPCP
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Type III glutamate--ammonia ligase
著者Li, C.Y, Zhang, Y.Z.
登録日2020-08-11
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.962 Å)
主引用文献Crystal structures of gamma-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine.
J.Biol.Chem., 296, 2020
7CQU
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BU of 7cqu by Molmil
GmaS/ADP/MetSox-P complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, MAGNESIUM ION, ...
著者Li, C.Y, Zhang, Y.Z.
登録日2020-08-11
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Crystal structures of gamma-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine.
J.Biol.Chem., 296, 2020
7CQX
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BU of 7cqx by Molmil
GmaS/ADP complex-Conformation 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, Type III glutamate--ammonia ligase
著者Li, C.Y, Zhang, Y.Z.
登録日2020-08-11
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Crystal structures of gamma-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine.
J.Biol.Chem., 296, 2020
7CQW
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BU of 7cqw by Molmil
GmaS/ADP complex-Conformation 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, Type III glutamate--ammonia ligase
著者Li, C.Y, Zhang, Y.Z.
登録日2020-08-11
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.297 Å)
主引用文献Crystal structures of gamma-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine.
J.Biol.Chem., 296, 2020
4XZ6
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BU of 4xz6 by Molmil
TmoX in complex with TMAO
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, GLYCEROL, ...
著者Zhang, Y.Z, Li, C.Y.
登録日2015-02-04
公開日2015-08-19
最終更新日2015-10-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanistic Insight into Trimethylamine N-Oxide Recognition by the Marine Bacterium Ruegeria pomeroyi DSS-3
J.Bacteriol., 197, 2015

 

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