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5CEA
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BU of 5cea by Molmil
Bd3460 Immunity Protein from Bdellovibrio bacteriovorus
分子名称: Bd3460
著者Lovering, A.L, Cadby, I.T, Lambert, C, Sockett, R.E.
登録日2015-07-06
公開日2015-12-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Ankyrin-mediated self-protection during cell invasion by the bacterial predator Bdellovibrio bacteriovorus.
Nat Commun, 6, 2015
5CED
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BU of 5ced by Molmil
Penicillin G Acylated Bd3459 Predatory Endopeptidase from Bdellovibrio bacteriovorus in complex with immunity protein Bd3460
分子名称: Bd3459, Bd3460, OPEN FORM - PENICILLIN G
著者Lovering, A.L, Cadby, I.T, Lambert, C, Sockett, R.E.
登録日2015-07-06
公開日2015-12-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Ankyrin-mediated self-protection during cell invasion by the bacterial predator Bdellovibrio bacteriovorus.
Nat Commun, 6, 2015
5CER
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BU of 5cer by Molmil
Bd0816 Predatory Endopeptidase from Bdellovibrio bacteriovorus in complex with immunity protein Bd3460
分子名称: 1,2-ETHANEDIOL, Bd0816, Bd3460
著者Lovering, A.L, Cadby, I.T, Lambert, C, Sockett, R.E.
登録日2015-07-07
公開日2015-12-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Ankyrin-mediated self-protection during cell invasion by the bacterial predator Bdellovibrio bacteriovorus.
Nat Commun, 6, 2015
5CEC
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BU of 5cec by Molmil
Bd3459 Predatory Endopeptidase from Bdellovibrio bacteriovorus in complex with immunity protein Bd3460
分子名称: Bd3459, Bd3460, SULFATE ION
著者Lovering, A.L, Cadby, I.T, Lambert, C, Sockett, R.E.
登録日2015-07-06
公開日2015-12-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Ankyrin-mediated self-protection during cell invasion by the bacterial predator Bdellovibrio bacteriovorus.
Nat Commun, 6, 2015
5CEB
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BU of 5ceb by Molmil
Bd3459 Predatory Endopeptidase from Bdellovibrio bacteriovorus, K38M form
分子名称: Bd3459
著者Lovering, A.L, Cadby, I.T, Lambert, C, Sockett, R.E.
登録日2015-07-06
公開日2015-12-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Ankyrin-mediated self-protection during cell invasion by the bacterial predator Bdellovibrio bacteriovorus.
Nat Commun, 6, 2015
5JP6
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BU of 5jp6 by Molmil
Bdellovibrio bacteriovorus peptidoglycan deacetylase Bd3279
分子名称: MAGNESIUM ION, Putative polysaccharide deacetylase, ZINC ION
著者Lovering, A.L.
登録日2016-05-03
公開日2016-06-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Interrupting peptidoglycan deacetylation during Bdellovibrio predator-prey interaction prevents ultimate destruction of prey wall, liberating bacterial-ghosts.
Sci Rep, 6, 2016
6TA9
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BU of 6ta9 by Molmil
Bd0314 DslA wild-type form 1
分子名称: SLT domain-containing protein, SULFATE ION
著者Lovering, A.L, Harding, C.J.
登録日2019-10-29
公開日2020-07-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.361 Å)
主引用文献A lysozyme with altered substrate specificity facilitates prey cell exit by the periplasmic predator Bdellovibrio bacteriovorus.
Nat Commun, 11, 2020
8FVX
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BU of 8fvx by Molmil
Histone from Bdellovibrio bacteriovorus
分子名称: CBFD_NFYB_HMF domain-containing protein
著者Laursen, S.P, Luger, K.
登録日2023-01-19
公開日2023-08-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Histones with an unconventional DNA-binding mode in vitro are major chromatin constituents in the bacterium Bdellovibrio bacteriovorus.
Nat Microbiol, 8, 2023
8FW7
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BU of 8fw7 by Molmil
Histone from Bdellovibrio bacteriovorus bound to dsDNA
分子名称: CBFD_NFYB_HMF domain-containing protein, DNA (5'-D(P*AP*T)-3'), DNA (5'-D(P*CP*AP*T)-3')
著者Laursen, S.P, Luger, K.
登録日2023-01-20
公開日2023-08-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Histones with an unconventional DNA-binding mode in vitro are major chromatin constituents in the bacterium Bdellovibrio bacteriovorus.
Nat Microbiol, 8, 2023
7OA3
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BU of 7oa3 by Molmil
Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium hexammine co-crystallized form)
分子名称: Chili RNA Aptamer, DMHBO+, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Mieczkowski, M, Pena, V, Hoebartner, C.
登録日2021-04-19
公開日2021-06-16
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Large Stokes shift fluorescence activation in an RNA aptamer by intermolecular proton transfer to guanine.
Nat Commun, 12, 2021
7OAX
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BU of 7oax by Molmil
Crystal structure of the Chili RNA aptamer in complex with DMHBO+
分子名称: CHLORIDE ION, Chili RNA Aptamer, DMHBO+, ...
著者Mieczkowski, M, Pena, V, Hoebartner, C.
登録日2021-04-20
公開日2021-06-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Large Stokes shift fluorescence activation in an RNA aptamer by intermolecular proton transfer to guanine.
Nat Commun, 12, 2021
7OAW
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BU of 7oaw by Molmil
Crystal structure of the Chili RNA aptamer in complex with DMHBI+
分子名称: CHLORIDE ION, Chili RNA Aptamer, DMHBI+, ...
著者Mieczkowski, M, Pena, V, Hoebartner, C.
登録日2021-04-20
公開日2021-06-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Large Stokes shift fluorescence activation in an RNA aptamer by intermolecular proton transfer to guanine.
Nat Commun, 12, 2021
7OAV
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BU of 7oav by Molmil
Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium III hexammine soaking crystal form)
分子名称: CHLORIDE ION, Chili RNA Aptamer, DMHBO+, ...
著者Mieczkowski, M, Pena, V, Hoebartner, C.
登録日2021-04-20
公開日2021-06-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Large Stokes shift fluorescence activation in an RNA aptamer by intermolecular proton transfer to guanine.
Nat Commun, 12, 2021
6HQ2
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BU of 6hq2 by Molmil
Structure of EAL Enzyme Bd1971 - apo form
分子名称: EAL Enzyme Bd1971
著者Lovering, A.L, Cadby, I.T.
登録日2018-09-24
公開日2019-07-31
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Nucleotide signaling pathway convergence in a cAMP-sensing bacterial c-di-GMP phosphodiesterase.
Embo J., 38, 2019
6HQ3
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BU of 6hq3 by Molmil
Structure of EAL Enzyme Bd1971 - halfsite-occupied form
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, EAL Enzyme Bd1971
著者Lovering, A.L, Cadby, I.T.
登録日2018-09-24
公開日2019-07-31
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Nucleotide signaling pathway convergence in a cAMP-sensing bacterial c-di-GMP phosphodiesterase.
Embo J., 38, 2019
6HQ4
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BU of 6hq4 by Molmil
Structure of EAL enzyme Bd1971 - cAMP bound form
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, EAL Enzyme Bd1971, MAGNESIUM ION
著者Lovering, A.L, Cadby, I.T.
登録日2018-09-24
公開日2019-07-31
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Nucleotide signaling pathway convergence in a cAMP-sensing bacterial c-di-GMP phosphodiesterase.
Embo J., 38, 2019
6HQ7
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BU of 6hq7 by Molmil
Structure of EAL Enzyme Bd1971 - cGMP bound form
分子名称: CYCLIC GUANOSINE MONOPHOSPHATE, EAL Enzyme Bd1971, MAGNESIUM ION
著者Lovering, A.L, Cadby, I.T.
登録日2018-09-24
公開日2019-07-31
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Nucleotide signaling pathway convergence in a cAMP-sensing bacterial c-di-GMP phosphodiesterase.
Embo J., 38, 2019
6HQ5
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BU of 6hq5 by Molmil
Structure of EAL Enzyme Bd1971 - cAMP and cyclic-di-GMP bound form
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CALCIUM ION, ...
著者Lovering, A.L, Cadby, I.T.
登録日2018-09-24
公開日2019-07-31
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Nucleotide signaling pathway convergence in a cAMP-sensing bacterial c-di-GMP phosphodiesterase.
Embo J., 38, 2019
7O21
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BU of 7o21 by Molmil
Structure of Bdellovibrio bacteriovorus Bd1075
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Lovering, A.L, Valdivia-Delgado, M.
登録日2021-03-30
公開日2021-04-21
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Asymmetric peptidoglycan editing generates cell curvature in Bdellovibrio predatory bacteria.
Nat Commun, 13, 2022
8ONF
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BU of 8onf by Molmil
Crystal structure of Bdellovibrio bacteriovorus Bd2439 fibre C-terminal domains with ethylene glycol
分子名称: 1,2-ETHANEDIOL, Cell wall surface anchor family protein
著者Caulton, S.G, Lovering, A.L.
登録日2023-04-02
公開日2023-10-25
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
8OJN
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BU of 8ojn by Molmil
Structure of the C-terminal beta helix domain of the Bdellovibrio bacteriovorus Bd3182 fibre
分子名称: Cell wall surface anchor family protein
著者Caulton, S.G, Lovering, A.L.
登録日2023-03-24
公開日2023-10-25
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
8OML
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BU of 8oml by Molmil
Crystal structure of Bdellovibrio bacteriovorus Bd1334 C-terminal domains
分子名称: Cell wall surface anchor family protein, PHOSPHATE ION
著者Caulton, S.G, Lovering, A.L.
登録日2023-03-31
公開日2023-10-25
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
8ONC
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BU of 8onc by Molmil
Structure of the C-terminal beta helix domain of the Bdellovibrio bacteriovorus Bd3182 fibre
分子名称: 1,2-ETHANEDIOL, Cell wall surface anchor family protein
著者Caulton, S.G, Lovering, A.L.
登録日2023-04-01
公開日2023-10-25
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
8OK3
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BU of 8ok3 by Molmil
Structure of the C-terminal domain of the Bdellovibrio bacteriovorus Bd2133 fibre
分子名称: Bd2133, CHLORIDE ION, SODIUM ION, ...
著者Caulton, S.G, Lovering, A.L.
登録日2023-03-27
公開日2023-10-25
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
8OL4
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BU of 8ol4 by Molmil
Structure of the C-terminal domains of the Bdellovibrio bacteriovorus Bd2439 fibre in complex with GlcNAc
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell wall surface anchor family protein, ...
著者Caulton, S.G, Lovering, A.L.
登録日2023-03-30
公開日2023-10-25
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024

 

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