Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6XHH
DownloadVisualize
BU of 6xhh by Molmil
Far-red absorbing dark state of JSC1_58120g3 with bound 18-1, 18-2 dihydrobiliverdin IXa (DHBV), the native chromophore precursor
分子名称: 1,2-ETHANEDIOL, JSC1_58120g3, mesobiliverdin IX(alpha)
著者Moreno, M.V, Rockwell, N.C, Fisher, A.J, Lagarias, J.C.
登録日2020-06-18
公開日2020-10-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A far-red cyanobacteriochrome lineage specific for verdins.
Proc.Natl.Acad.Sci.USA, 117, 2020
6XHG
DownloadVisualize
BU of 6xhg by Molmil
Far-red absorbing dark state of JSC1_58120g3 with bound biliverdin IXa (BV)
分子名称: 1,2-ETHANEDIOL, 3-[2-[(~{Z})-[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(~{Z})-(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, JSC1_58120g3
著者Moreno, M.V, Rockwell, N.C, Fisher, A.J, Lagarias, J.C.
登録日2020-06-18
公開日2020-10-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A far-red cyanobacteriochrome lineage specific for verdins.
Proc.Natl.Acad.Sci.USA, 117, 2020
4RAJ
DownloadVisualize
BU of 4raj by Molmil
Crystal structure of heme oxygenase 2 from Chlamydomonas reinhardtii without heme.
分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Heme oxygenase
著者Fisher, A.J, Lagarias, J.C.
登録日2014-09-10
公開日2015-09-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Crystal structure of heme oxygenase 2 from Chlamydomonas reinhardtii without heme.
To be Published
6BHN
DownloadVisualize
BU of 6bhn by Molmil
Red Light-Absorbing State of NpR6012g4, a Red/Green Cyanobacteriochrome
分子名称: Methyl-accepting chemotaxis sensory transducer with phytochrome sensor, PHYCOCYANOBILIN
著者Yu, Q, Lim, S, Rockwell, N.C, Martin, S.S, Lagarias, J.C, Ames, J.B.
登録日2017-10-31
公開日2018-04-18
最終更新日2019-12-04
実験手法SOLUTION NMR
主引用文献Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BHO
DownloadVisualize
BU of 6bho by Molmil
Green Light-Absorbing State of NpR6012g4, a Red/Green Cyanobacteriochrome
分子名称: Methyl-accepting chemotaxis sensory transducer with phytochrome sensor, PHYCOCYANOBILIN
著者Lim, S, Yu, Q, Rockwell, N.C, Martin, S.S, Lagarias, J.C, Ames, J.B.
登録日2017-10-31
公開日2018-04-18
最終更新日2019-12-04
実験手法SOLUTION NMR
主引用文献Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2G18
DownloadVisualize
BU of 2g18 by Molmil
Crystal Structure of Nostoc sp. 7120 phycocyanobilin:ferredoxin oxidoreductase (PcyA) Apoprotein
分子名称: CALCIUM ION, Phycocyanobilin:ferredoxin oxidoreductase
著者Tu, S.-L, Lagarias, J.C, Fisher, A.J.
登録日2006-02-13
公開日2006-12-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insight into the radical mechanism of phycocyanobilin-ferredoxin oxidoreductase (PcyA) revealed by X-ray crystallography and biochemical measurements.
Biochemistry, 46, 2007
3NB9
DownloadVisualize
BU of 3nb9 by Molmil
Crystal structure of radical H88Q Synechocystis sp. PCYA
分子名称: 1,2-ETHANEDIOL, BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase
著者Gae, D.D.
登録日2010-06-03
公開日2010-10-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for hydration dynamics in radical stabilization of bilin reductase mutants.
Biochemistry, 49, 2010
3NB8
DownloadVisualize
BU of 3nb8 by Molmil
Crystal structure of oxidized H88Q Synechocystis sp. PCYA
分子名称: 1,2-ETHANEDIOL, BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase
著者Gae, D.D.
登録日2010-06-03
公開日2010-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural basis for hydration dynamics in radical stabilization of bilin reductase mutants.
Biochemistry, 49, 2010
6UVB
DownloadVisualize
BU of 6uvb by Molmil
Crystal structure of far-red-light absorbing cyanobacteriochrome at 100K
分子名称: Multi-sensor signal transduction histidine kinase, PHYCOCYANOBILIN
著者Yang, X, Ren, Z, Bandara, S.
登録日2019-11-01
公開日2020-11-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of a far-red-sensing cyanobacteriochrome reveals an atypical bilin conformation and spectral tuning mechanism.
Proc.Natl.Acad.Sci.USA, 118, 2021
6UV8
DownloadVisualize
BU of 6uv8 by Molmil
Crystal structure of a far-red cyanobacteriochrome photoreceptor at room temperature
分子名称: Multi-sensor signal transduction histidine kinase, PHYCOCYANOBILIN
著者Yang, X, Ren, Z, Bandara, S.
登録日2019-11-01
公開日2020-11-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Crystal structure of a far-red-sensing cyanobacteriochrome reveals an atypical bilin conformation and spectral tuning mechanism.
Proc.Natl.Acad.Sci.USA, 118, 2021
5VIQ
DownloadVisualize
BU of 5viq by Molmil
Crystal structure of monomeric near-infrared fluorescent protein miRFP709
分子名称: BILIVERDINE IX ALPHA, monomeric near-infrared fluorescent protein miRFP709
著者Pletnev, S.
登録日2017-04-17
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies.
Chem Sci, 8, 2017
5VIV
DownloadVisualize
BU of 5viv by Molmil
Crystal structure of monomeric near-infrared fluorescent protein miRFP670
分子名称: 3-[2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl] methyl]-5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]pro panoic acid, 3-[5-[[(3~{R},4~{R})-3-ethenyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, CHLORIDE ION, ...
著者Pletnev, S.
登録日2017-04-17
公開日2017-06-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies.
Chem Sci, 8, 2017
5VIK
DownloadVisualize
BU of 5vik by Molmil
Crystal structure of monomeric near-infrared fluorescent protein miRFP703
分子名称: BILIVERDINE IX ALPHA, near-infrared fluorescent protein miRFP703
著者Pletnev, S.
登録日2017-04-17
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies.
Chem Sci, 8, 2017
3F0L
DownloadVisualize
BU of 3f0l by Molmil
Crystal structure of oxidized D105N Synechocystis sp. PcyA
分子名称: 1,2-ETHANEDIOL, BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase
著者Kohler, A.C, Gae, D.D.
登録日2008-10-25
公開日2009-10-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural basis for hydration dynamics in radical stabilization of bilin reductase mutants.
Biochemistry, 49, 2010
3I94
DownloadVisualize
BU of 3i94 by Molmil
Crystal structure of PcyA-biliverdin XIII alpha complex
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(3-ethenyl-4-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-2-ylidene]methy l]-5-[(Z)-(3-ethenyl-4-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Phycocyanobilin:ferredoxin oxidoreductase, SULFATE ION
著者Hagiwara, Y, Sugishima, M, Fukuyama, K.
登録日2009-07-10
公開日2009-10-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Structural insights into vinyl reduction regiospecificity of phycocyanobilin:ferredoxin oxidoreductase (PcyA).
to be published
3F0M
DownloadVisualize
BU of 3f0m by Molmil
Crystal structure of radical D105N Synechocystis sp. PcyA
分子名称: 1,2-ETHANEDIOL, BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase
著者Kohler, A.C, Gae, D.D.
登録日2008-10-25
公開日2009-10-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for hydration dynamics in radical stabilization of bilin reductase mutants.
Biochemistry, 49, 2010
3I8U
DownloadVisualize
BU of 3i8u by Molmil
Crystal structure of PcyA-181,182-dihydrobiliverdin complex
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(3-ethenyl-4-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-2-ylidene]methy l]-5-[(Z)-(4-ethyl-3-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Phycocyanobilin:ferredoxin oxidoreductase
著者Hagiwara, Y, Sugishima, M, Fukuyama, K.
登録日2009-07-10
公開日2009-10-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural insights into vinyl reduction regiospecificity of phycocyanobilin:ferredoxin oxidoreductase (PcyA).
To be Published
3I95
DownloadVisualize
BU of 3i95 by Molmil
Crystal structure of E76Q mutant PcyA-biliverdin complex
分子名称: BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase
著者Hagiwara, Y, Sugishima, M, Fukuyama, K.
登録日2009-07-10
公開日2009-10-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural insights into vinyl reduction regiospecificity of phycocyanobilin:ferredoxin oxidoreductase (PcyA).
To be Published

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon