1UAC
 
 | | Crystal Structure of HYHEL-10 FV MUTANT SFSF Complexed with TURKEY WHITE LYSOZYME | | 分子名称: | Ig VH,anti-lysozyme, Lysozyme C, lysozyme binding Ig kappa chain V23-J2 region | | 著者 | Kumagai, I, Nishimiya, Y, Kondo, H, Tsumoto, K. | | 登録日 | 2003-03-08 | | 公開日 | 2004-03-23 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Structural consequences of target epitope-directed functional alteration of an antibody. The case of anti-hen lysozyme antibody, HyHEL-10
J.BIOL.CHEM., 278, 2003
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1UA6
 | | Crystal structure of HYHEL-10 FV MUTANT SFSF complexed with HEN EGG WHITE LYSOZYME complex | | 分子名称: | Ig VH,anti-lysozyme, Lysozyme C, lysozyme binding Ig kappa chain V23-J2 region | | 著者 | Kumagai, I, Nishimiya, Y, Kondo, H, Tsumoto, K. | | 登録日 | 2003-02-28 | | 公開日 | 2004-03-09 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Structural consequences of target epitope-directed functional alteration of an antibody. The case of anti-hen lysozyme antibody, HyHEL-10
J.Biol.Chem., 278, 2003
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1C08
 | | CRYSTAL STRUCTURE OF HYHEL-10 FV-HEN LYSOZYME COMPLEX | | 分子名称: | ANTI-HEN EGG WHITE LYSOZYME ANTIBODY (HYHEL-10), LYSOZYME | | 著者 | Shiroishi, M, Kondo, H, Matsushima, M, Tsumoto, K, Kumagai, I. | | 登録日 | 1999-07-15 | | 公開日 | 2000-07-19 | | 最終更新日 | 2023-05-31 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Crystal structure of anti-Hen egg white lysozyme antibody (HyHEL-10) Fv-antigen complex. Local structural changes in the protein antigen and water-mediated interactions of Fv-antigen and light chain-heavy chain interfaces.
J.Biol.Chem., 274, 1999
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1FKQ
 | | RECOMBINANT GOAT ALPHA-LACTALBUMIN T29V | | 分子名称: | ALPHA-LACTALBUMIN, CALCIUM ION | | 著者 | Horii, K, Matsushima, M, Tsumoto, K, Kumagai, I. | | 登録日 | 2000-08-10 | | 公開日 | 2001-02-14 | | 最終更新日 | 2021-11-03 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Contribution of Thr29 to the thermodynamic stability of goat alpha-lactalbumin as determined by experimental and theoretical approaches.
Proteins, 45, 2001
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1FKV
 | | RECOMBINANT GOAT ALPHA-LACTALBUMIN T29I | | 分子名称: | ALPHA-LACTALBUMIN, CALCIUM ION | | 著者 | Horii, K, Matsushima, M, Tsumoto, K, Kumagai, I. | | 登録日 | 2000-08-10 | | 公開日 | 2001-02-14 | | 最終更新日 | 2021-11-03 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Contribution of Thr29 to the thermodynamic stability of goat alpha-lactalbumin as determined by experimental and theoretical approaches.
Proteins, 45, 2001
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1HMK
 | | RECOMBINANT GOAT ALPHA-LACTALBUMIN | | 分子名称: | CALCIUM ION, PROTEIN (ALPHA-LACTALBUMIN) | | 著者 | Horii, K, Matsushima, M, Tsumoto, K, Kumagai, I. | | 登録日 | 1998-11-26 | | 公開日 | 1999-11-26 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Effect of the extra n-terminal methionine residue on the stability and folding of recombinant alpha-lactalbumin expressed in Escherichia coli.
J.Mol.Biol., 285, 1999
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5AYU
 | | Crystal structure of HyHEL-10 Fv | | 分子名称: | GLYCEROL, Ig VH,anti-lysozyme, lysozyme binding Ig kappa chain V23-J2 region | | 著者 | Nakanishi, T, Tsumoto, K, Yokota, A, Kondo, H, Kumagai, I. | | 登録日 | 2015-09-04 | | 公開日 | 2016-09-07 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Crystal structure of HyHEL-10 Fv
To Be Published
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1UD9
 | | Crystal Structure of Proliferating Cell Nuclear Antigen (PCNA) Homolog From Sulfolobus tokodaii | | 分子名称: | DNA polymerase sliding clamp A, ZINC ION | | 著者 | Tanabe, E, Yasutake, Y, Tanaka, Y, Yao, M, Tsumoto, K, Kumagai, I, Tanaka, I. | | 登録日 | 2003-04-28 | | 公開日 | 2004-06-15 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (1.68 Å) | | 主引用文献 | Crystal Structure of Proliferating Cell Nuclear Antigen (PCNA) Homolog From Sulfolobus tokodaii
To be published
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1UKU
 | | Crystal Structure of Pyrococcus horikoshii CutA1 Complexed with Cu2+ | | 分子名称: | COPPER (II) ION, periplasmic divalent cation tolerance protein CutA | | 著者 | Tanaka, Y, Yasutake, Y, Yao, M, Sakai, N, Tanaka, I, Tsumoto, K, Kumagai, I. | | 登録日 | 2003-09-01 | | 公開日 | 2004-01-13 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | | 主引用文献 | Structural implications for heavy metal-induced reversible assembly and aggregation of a protein: the case of Pyrococcus horikoshii CutA.
Febs Lett., 556, 2004
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1UMJ
 | | Crystal structure of Pyrococcus horikoshii CutA in the presence of 3M guanidine hydrochloride | | 分子名称: | GUANIDINE, periplasmic divalent cation tolerance protein CutA | | 著者 | Tanaka, Y, Tsumoto, K, Yasutake, Y, Sakai, N, Yao, M, Tanaka, I, Kumagai, I. | | 登録日 | 2003-10-02 | | 公開日 | 2004-10-05 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Structural evidence for guanidine-protein side chain interactions: crystal structure of CutA from Pyrococcus horikoshii in 3M guanidine hydrochloride
Biochem.Biophys.Res.Commun., 323, 2004
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1VBF
 | | Crystal structure of protein L-isoaspartate O-methyltransferase homologue from Sulfolobus tokodaii | | 分子名称: | 231aa long hypothetical protein-L-isoaspartate O-methyltransferase | | 著者 | Tanaka, Y, Tsumoto, K, Yasutake, Y, Umetsu, M, Yao, M, Tanaka, I, Fukada, H, Kumagai, I. | | 登録日 | 2004-02-25 | | 公開日 | 2004-08-10 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | How Oligomerization Contributes to the Thermostability of an Archaeon Protein: PROTEIN L-ISOASPARTYL-O-METHYLTRANSFERASE FROM SULFOLOBUS TOKODAII
J.Biol.Chem., 279, 2004
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1VE0
 | | Crystal structure of uncharacterized protein ST2072 from Sulfolobus tokodaii | | 分子名称: | SULFATE ION, ZINC ION, hypothetical protein (ST2072) | | 著者 | Tanabe, E, Horiike, Y, Tsumoto, K, Yasutake, Y, Yao, M, Tanaka, I, Kumagai, I. | | 登録日 | 2004-03-26 | | 公開日 | 2005-03-22 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Crystal structure of the uncharacterized protein ST2072 from Sulfolobus tokodaii
To be Published
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1WSC
 | | Crystal structure of ST0229, function unknown protein from Sulfolobus tokodaii | | 分子名称: | Hypothetical protein ST0229 | | 著者 | Murayama, T, Tanaka, Y, Sasaki, T, Yasutake, Y, Yao, M, Tsumoto, K, Tanaka, I, Kumagai, I. | | 登録日 | 2004-11-05 | | 公開日 | 2005-11-08 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2.45 Å) | | 主引用文献 | Crystal structure of ST0229, function unknown protein from Sulfolobus tokodaii
To be Published
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1WOZ
 | | Crystal structure of uncharacterized protein ST1454 from Sulfolobus tokodaii | | 分子名称: | (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, 177aa long conserved hypothetical protein (ST1454) | | 著者 | Sasaki, T, Tanaka, Y, Yasutake, Y, Yao, M, Tanaka, I, Tsumoto, K, Kumagai, I. | | 登録日 | 2004-08-27 | | 公開日 | 2005-10-04 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (1.94 Å) | | 主引用文献 | Crystal structure of the uncharacterized protein ST1454 from Sulfolobus tokodaii.
To be Published
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1WVT
 | | Crystal structure of uncharacterized protein ST2180 from Sulfolobus tokodaii | | 分子名称: | hypothetical protein ST2180 | | 著者 | Sasaki, T, Tanaka, Y, Yasutake, Y, Tsumoto, K, Tanaka, I, Kumagai, I. | | 登録日 | 2004-12-27 | | 公開日 | 2006-01-03 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Molecular properties of two proteins homologous to PduO-type ATP:cob(I)alamin adenosyltransferase from Sulfolobus tokodaii
Proteins, 68, 2007
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1IC4
 | | CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HD32A)-HEN LYSOZYME COMPLEX | | 分子名称: | IGG1 FAB CHAIN H, LYSOZYME BINDING IG KAPPA CHAIN, LYSOZYME C | | 著者 | Shiroishi, M, Yokota, A, Tsumoto, K, Kondo, H, Nishimiya, Y, Horii, K, Matsushima, M, Ogasahara, K, Yutani, K, Kumagai, I. | | 登録日 | 2001-03-30 | | 公開日 | 2001-07-18 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Structural evidence for entropic contribution of salt bridge formation to a protein antigen-antibody interaction: the case of hen lysozyme-HyHEL-10 Fv complex.
J.Biol.Chem., 276, 2001
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1IC7
 | | CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HD32A99A)-HEN LYSOZYME COMPLEX | | 分子名称: | IGG1 FAB CHAIN H, LYSOZYME BINDING IG KAPPA CHAIN, LYSOZYME C | | 著者 | Shiroishi, M, Yokota, A, Tsumoto, K, Kondo, H, Nishimiya, Y, Horii, K, Matsushima, M, Ogasahara, K, Yutani, K, Kumagai, I. | | 登録日 | 2001-03-30 | | 公開日 | 2001-07-18 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Structural evidence for entropic contribution of salt bridge formation to a protein antigen-antibody interaction: the case of hen lysozyme-HyHEL-10 Fv complex.
J.Biol.Chem., 276, 2001
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1IC5
 | | CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HD99A)-HEN LYSOZYME COMPLEX | | 分子名称: | IGG1 FAB CHAIN H, LYSOZYME BINDING IG KAPPA CHAIN, LYSOZYME C | | 著者 | Shiroishi, M, Yokota, A, Tsumoto, K, Kondo, H, Nishimiya, Y, Horii, K, Matsushima, M, Ogasahara, K, Yutani, K, Kumagai, I. | | 登録日 | 2001-03-30 | | 公開日 | 2001-07-18 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Structural evidence for entropic contribution of salt bridge formation to a protein antigen-antibody interaction: the case of hen lysozyme-HyHEL-10 Fv complex.
J.Biol.Chem., 276, 2001
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1J08
 | | Crystal structure of glutaredoxin-like protein from Pyrococcus horikoshii | | 分子名称: | glutaredoxin-like protein | | 著者 | Tanaka, Y, Tanabe, E, Tsumoto, K, Kumagai, I, Yao, M, Tanaka, I. | | 登録日 | 2002-11-11 | | 公開日 | 2003-05-11 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Protein disulfide isomerase from hyperthermophile as an additives of refolding of an immunoglobulin-folded protein
To be Published
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1J2V
 | | Crystal Structure of CutA1 from Pyrococcus Horikoshii | | 分子名称: | 102AA long hypothetical periplasmic divalent cation tolerance protein CUTA | | 著者 | Tanaka, Y, Sakai, N, Yasutake, Y, Yao, M, Tsumoto, K, Kumagai, I, Tanaka, I. | | 登録日 | 2003-01-11 | | 公開日 | 2004-01-13 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Structural implications for heavy metal-induced reversible assembly and aggregation of a protein: the case of Pyrococcus horikoshii CutA.
Febs Lett., 556, 2004
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2D31
 | | Crystal structure of disulfide-linked HLA-G dimer | | 分子名称: | 9-mer peptide from Histone H2A, Beta-2-microglobulin, HLA class I histocompatibility antigen, ... | | 著者 | Shiroishi, M, Kuroki, K, Ose, T, Rasubala, L, Shiratori, I, Arase, H, Tsumoto, K, Kumagai, I, Kohda, D, Maenaka, K. | | 登録日 | 2005-09-23 | | 公開日 | 2006-03-14 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | | 主引用文献 | Efficient Leukocyte Ig-like Receptor Signaling and Crystal Structure of Disulfide-linked HLA-G Dimer
J.Biol.Chem., 281, 2006
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2DGD
 | | Crystal structure of ST0656, a function unknown protein from Sulfolobus tokodaii | | 分子名称: | 223aa long hypothetical arylmalonate decarboxylase, GLYCEROL | | 著者 | Tanaka, Y, Sasaki, T, Tanabe, E, Yao, M, Tanaka, I, Kumagai, I, Tsumoto, K. | | 登録日 | 2006-03-10 | | 公開日 | 2007-03-13 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | | 主引用文献 | Crystal structure of ST0656, a function unknown protein from Sulfolobus tokodaii
To be Published
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1UFU
 | | Crystal structure of ligand binding domain of immunoglobulin-like transcript 2 (ILT2; LIR-1) | | 分子名称: | Immunoglobulin-like transcript 2 | | 著者 | Shiroishi, M, Amano, K, Rasubala, L, Tsumoto, K, Kumagai, I, Kohda, D, Maenaka, K. | | 登録日 | 2003-06-10 | | 公開日 | 2004-08-10 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (3 Å) | | 主引用文献 | Kinetic and thermodynamic properties of the interaction between Immunoglobulin like transcript (ILT) and MHC class I
To be Published
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1WT5
 | | The Crystal Structure Of A Humanized Antibody Fv 528 | | 分子名称: | ANTI EGFR ANTIBODY FV REGION | | 著者 | Makabe, K, Tsumoto, K, Asano, R, Kondo, H, Kumagai, I. | | 登録日 | 2004-11-16 | | 公開日 | 2005-05-16 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Thermodynamic consequences of mutations in vernier zone residues of a humanized anti-human epidermal growth factor receptor murine antibody, 528
J.Biol.Chem., 283, 2008
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1J1P
 | | Crystal structure of HyHEL-10 Fv mutant LS91A complexed with hen egg white lysozyme | | 分子名称: | Ig VH,anti-lysozyme, Lysozyme C, lysozyme binding Ig kappa chain V23-J2 region | | 著者 | Yokota, A, Tsumoto, K, Shiroishi, M, Kondo, H, Kumagai, I. | | 登録日 | 2002-12-13 | | 公開日 | 2003-01-14 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | The Role of Hydrogen Bonding via Interfacial Water Molecules in Antigen-Antibody Complexation. THE HyHEL-10-HEL INTERACTION
J.BIOL.CHEM., 278, 2003
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