1V4N
 
 | | Structure of 5'-deoxy-5'-methylthioadenosine phosphorylase homologue from Sulfolobus tokodaii | | 分子名称: | 271aa long hypothetical 5'-methylthioadenosine phosphorylase | | 著者 | Kitago, Y, Yasutake, Y, Sakai, N, Tsujimura, M, Yao, M, Watanabe, N, Kawarabayasi, Y, Tanaka, I. | | 登録日 | 2003-11-14 | | 公開日 | 2005-01-04 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.45 Å) | | 主引用文献 | Crystal structure of Sulfolobus tokodaii MTAP
To be Published
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5GIR
 | | Crystal structure of a Fab fragment with its ligand peptide | | 分子名称: | 1,2-ETHANEDIOL, Heavy chain of Fab fragment, LYS-PRO-ILE-ILE-ILE-GLY-SER-HIS-ALA-TYR-GLY-ASP, ... | | 著者 | Kitago, Y, Kaneko, K.K, Ogasawara, S, Kato, Y, Takagi, J. | | 登録日 | 2016-06-24 | | 公開日 | 2016-09-14 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.93 Å) | | 主引用文献 | Structural basis for multi-specific peptide recognition by the anti-IDH1/2 monoclonal antibody, MsMab-1.
Biochem. Biophys. Res. Commun., 478, 2016
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5GIS
 | | Crystal structure of a Fab fragment with its ligand peptide | | 分子名称: | Heavy chain of Fab fragment, Light chain of Fab fragment, SULFATE ION, ... | | 著者 | Kitago, Y, Kaneko, K.K, Ogasawara, S, Kato, Y, Takagi, J. | | 登録日 | 2016-06-24 | | 公開日 | 2016-09-14 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.93 Å) | | 主引用文献 | Structural basis for multi-specific peptide recognition by the anti-IDH1/2 monoclonal antibody, MsMab-1.
Biochem. Biophys. Res. Commun., 478, 2016
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5AUM
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3WSX
 | | SorLA Vps10p domain in ligand-free form | | 分子名称: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHATE ION, ... | | 著者 | Kitago, Y, Nakata, Z, Nagae, M, Nogi, T, Takagi, J. | | 登録日 | 2014-03-30 | | 公開日 | 2015-02-04 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | | 主引用文献 | Structural basis for amyloidogenic peptide recognition by sorLA.
Nat.Struct.Mol.Biol., 22, 2015
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3WSY
 | | SorLA Vps10p domain in complex with its own propeptide fragment | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Sortilin-related receptor, peptide from Sortilin-related receptor | | 著者 | Kitago, Y, Nakata, Z, Nagae, M, Nogi, T, Takagi, J. | | 登録日 | 2014-03-30 | | 公開日 | 2015-02-04 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (3.11 Å) | | 主引用文献 | Structural basis for amyloidogenic peptide recognition by sorLA.
Nat.Struct.Mol.Biol., 22, 2015
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3WSZ
 | | SorLA Vps10p domain in complex with Abeta-derived peptide | | 分子名称: | 10-mer peptide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Sortilin-related receptor | | 著者 | Kitago, Y, Nakata, Z, Nagae, M, Nogi, T, Takagi, J. | | 登録日 | 2014-03-30 | | 公開日 | 2015-02-04 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (3.201 Å) | | 主引用文献 | Structural basis for amyloidogenic peptide recognition by sorLA.
Nat.Struct.Mol.Biol., 22, 2015
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2E6U
 | | Crystal structure of hypothetical protein PH1109 from Pyrococcus horikoshii | | 分子名称: | CALCIUM ION, CHLORIDE ION, COENZYME A, ... | | 著者 | Kitago, Y, Min, Y, Watanabe, N, Tanaka, I. | | 登録日 | 2007-01-03 | | 公開日 | 2007-01-23 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Structure determination of a novel protein by sulfur SAD using chromium radiation in combination with a new crystal-mounting method
ACTA CRYSTALLOGR.,SECT.D, 61, 2005
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2CVI
 | | Crystal structure of hypothetical protein PHS023 from Pyrococcus horikoshii | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, 75aa long hypothetical regulatory protein AsnC, POTASSIUM ION | | 著者 | Kitago, Y, Sakai, N, Matsumoto, D, Yao, M, Aizawa, T, Demura, M, Kawano, K, Nitta, K, Watanabe, N, Tanaka, I. | | 登録日 | 2005-06-03 | | 公開日 | 2006-06-03 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | Crystal structure of hypothetical protein PHS023 from Pyrococcus horikoshii
TO BE PUBLISHED
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2E4T
 | | Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum | | 分子名称: | CALCIUM ION, CHLORIDE ION, Endoglucanase, ... | | 著者 | Kitago, Y, Karita, S, Watanabe, N, Sakka, K, Tanaka, I. | | 登録日 | 2006-12-16 | | 公開日 | 2007-09-18 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (0.96 Å) | | 主引用文献 | Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum.
J.Biol.Chem., 282, 2007
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2EEX
 | | Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum | | 分子名称: | CALCIUM ION, CHLORIDE ION, Endoglucanase, ... | | 著者 | Kitago, Y, Karita, S, Watanabe, N, Sakka, K, Tanaka, I. | | 登録日 | 2007-02-19 | | 公開日 | 2007-09-18 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum.
J.Biol.Chem., 282, 2007
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2EJ1
 | | Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum | | 分子名称: | CALCIUM ION, CHLORIDE ION, Endoglucanase, ... | | 著者 | Kitago, Y, Karita, S, Watanabe, N, Sakka, K, Tanaka, I. | | 登録日 | 2007-03-14 | | 公開日 | 2007-09-18 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum.
J.Biol.Chem., 282, 2007
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2E0P
 | | The crystal structure of Cel44A | | 分子名称: | CALCIUM ION, CHLORIDE ION, Endoglucanase, ... | | 著者 | Kitago, Y, Karita, S, Watanabe, N, Sakka, K, Tanaka, I. | | 登録日 | 2006-10-11 | | 公開日 | 2007-09-18 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum.
J.Biol.Chem., 282, 2007
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2EQD
 | | Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum | | 分子名称: | CALCIUM ION, CHLORIDE ION, Endoglucanase, ... | | 著者 | Kitago, Y, Karita, S, Watanabe, N, Sakka, K, Tanaka, I. | | 登録日 | 2007-03-30 | | 公開日 | 2007-09-18 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum.
J.Biol.Chem., 282, 2007
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6LZ9
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4YO0
 | | Crystal structure of monoclonal anti-human podoplanin antibody NZ-1 with bound PA peptide | | 分子名称: | 1,2-ETHANEDIOL, Heavy chain of antigen binding fragment, Fab, ... | | 著者 | Fujii, Y, Kitago, Y, Arimori, T, Takagi, J. | | 登録日 | 2015-03-11 | | 公開日 | 2016-03-02 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.56 Å) | | 主引用文献 | Tailored placement of a turn-forming PA tag into the structured domain of a protein to probe its conformational state
J.Cell.Sci., 129, 2016
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4YNY
 | | Crystal structure of monoclonal anti-human podoplanin antibody NZ-1 | | 分子名称: | Heavy chain of antigen binding fragment, Fab, Light chain of antigen binding fragment | | 著者 | Fujii, Y, Kitago, Y, Arimori, T, Takagi, J. | | 登録日 | 2015-03-11 | | 公開日 | 2016-03-02 | | 最終更新日 | 2024-10-09 | | 実験手法 | X-RAY DIFFRACTION (1.584 Å) | | 主引用文献 | Tailored placement of a turn-forming PA tag into the structured domain of a protein to probe its conformational state
J.Cell.Sci., 129, 2016
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5B4W
 | | Crystal structure of Plexin inhibitor complex | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-B1, Synthesized cyclic peptide | | 著者 | Matsunaga, Y, Kitago, Y, Arimori, T, Takagi, J. | | 登録日 | 2016-04-19 | | 公開日 | 2016-12-28 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | | 主引用文献 | Allosteric Inhibition of a Semaphorin 4D Receptor Plexin B1 by a High-Affinity Macrocyclic Peptide
Cell Chem Biol, 23, 2016
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2ZY6
 | | Crystal structure of a truncated tRNA, TPHE39A | | 分子名称: | CALCIUM ION, CHLORIDE ION, MAGNESIUM ION, ... | | 著者 | Tanaka, I, Yao, M, Tanaka, Y, Kitago, Y, Ymagata, S. | | 登録日 | 2009-01-14 | | 公開日 | 2009-06-30 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | | 主引用文献 | Deduced RNA binding mechanism of ThiI based on structural and binding analyses of a minimal RNA ligand
Rna, 15, 2009
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3A8S
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3WBQ
 | | Crystal structure of carbohydrate recognition domain of Blood Dendritic Cell Antigen-2 (BDCA2) lectin (crystal form-2) | | 分子名称: | C-type lectin domain family 4 member C | | 著者 | Nagae, M, Ikeda, A, Kitago, Y, Matsumoto, N, Yamamoto, K, Yamaguchi, Y. | | 登録日 | 2013-05-20 | | 公開日 | 2013-12-25 | | 最終更新日 | 2024-10-09 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Crystal structures of carbohydrate recognition domain of blood dendritic cell antigen-2 (BDCA2) reveal a common domain-swapped dimer.
Proteins, 82, 2014
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3WBP
 | | Crystal structure of carbohydrate recognition domain of Blood Dendritic Cell Antigen-2 (BDCA2) lectin (crystal form-1) | | 分子名称: | 1,2-ETHANEDIOL, C-type lectin domain family 4 member C | | 著者 | Nagae, M, Ikeda, A, Kitago, Y, Matsumoto, N, Yamamoto, K, Yamaguchi, Y. | | 登録日 | 2013-05-20 | | 公開日 | 2013-12-25 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Crystal structures of carbohydrate recognition domain of blood dendritic cell antigen-2 (BDCA2) reveal a common domain-swapped dimer.
Proteins, 82, 2014
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3WBR
 | | Crystal structure of carbohydrate recognition domain of Blood Dendritic Cell Antigen-2 (BDCA2) lectin (crystal form-3) | | 分子名称: | C-type lectin domain family 4 member C | | 著者 | Nagae, M, Ikeda, A, Kitago, Y, Matsumoto, N, Yamamoto, K, Yamaguchi, Y. | | 登録日 | 2013-05-20 | | 公開日 | 2013-12-25 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Crystal structures of carbohydrate recognition domain of blood dendritic cell antigen-2 (BDCA2) reveal a common domain-swapped dimer.
Proteins, 82, 2014
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5XAU
 | | Crystal structure of integrin binding fragment of laminin-511 | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | | 著者 | Takizawa, M, Arimori, T, Kitago, Y, Takagi, J, Sekiguchi, K. | | 登録日 | 2017-03-15 | | 公開日 | 2017-09-20 | | 最終更新日 | 2024-10-16 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Mechanistic basis for the recognition of laminin-511 by alpha 6 beta 1 integrin.
Sci Adv, 3, 2017
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2EO7
 | | Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum | | 分子名称: | CALCIUM ION, CHLORIDE ION, Endoglucanase, ... | | 著者 | Kitao, Y, Karita, S, Watanabe, N, Sakka, K, Tanaka, I. | | 登録日 | 2007-03-29 | | 公開日 | 2007-09-18 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | | 主引用文献 | Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum.
J.Biol.Chem., 282, 2007
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