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1ZB9
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BU of 1zb9 by Molmil
Crystal structure of Xylella fastidiosa organic peroxide resistance protein
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, organic hydroperoxide resistance protein
著者Oliveira, M.A, Guimaraes, B.G, Cussiol, J.R, Medrano, F.J, Vidigal, S.A, Gozzo, F.C, Netto, L.E.
登録日2005-04-07
公開日2006-04-25
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Insights into Enzyme-Substrate Interaction and Characterization of Enzymatic Intermediates of Organic Hydroperoxide Resistance Protein from Xylella fastidiosa.
J.Mol.Biol., 359, 2006
1ZB8
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BU of 1zb8 by Molmil
Crystal structure of Xylella fastidiosa organic peroxide resistance protein
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, organic hydroperoxide resistance protein
著者Oliveira, M.A, Guimaraes, B.G, Cussiol, J.R, Medrano, F.J, Vidigal, S.A, Gozzo, F.C, Netto, L.E.
登録日2005-04-07
公開日2006-05-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Insights into Enzyme-Substrate Interaction and Characterization of Enzymatic Intermediates of Organic Hydroperoxide Resistance Protein from Xylella fastidiosa.
J.Mol.Biol., 359, 2006
5D9G
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BU of 5d9g by Molmil
Crystal structure of TIPRL, TOR signaling pathway regulator-like, in complex with peptide
分子名称: CHLORIDE ION, NICKEL (II) ION, PHOSPHATE ION, ...
著者Scorsato, V, Sandy, J, Brandao-Neto, J, Pereira, H.M, Smetana, J.H.C, Aparicio, R.
登録日2015-08-18
公開日2016-08-10
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of the human Tip41 orthologue, TIPRL, reveals a novel fold and a binding site for the PP2Ac C-terminus.
Sci Rep, 6, 2016
5VOK
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BU of 5vok by Molmil
Crystal structure of the C7orf59-HBXIP dimer
分子名称: Ragulator complex protein LAMTOR4, Ragulator complex protein LAMTOR5
著者Rasheed, N, Nascimento, A.F.Z, Bar-Peled, L, Shen, K, Sabatini, D.M, Aparicio, R, Smetana, J.H.C.
登録日2017-05-03
公開日2018-05-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献C7orf59/Lamtor4 phosphorylation and structural flexibility modulate Ragulator assembly.
Febs Open Bio, 2019
6XN2
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BU of 6xn2 by Molmil
Crystal structure of the GH43_1 enzyme from Xanthomonas citri complexed with xylotriose
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Morais, M.A.B, Tonoli, C.C.C, Santos, C.R, Murakami, M.T.
登録日2020-07-02
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.652 Å)
主引用文献Two distinct catalytic pathways for GH43 xylanolytic enzymes unveiled by X-ray and QM/MM simulations.
Nat Commun, 12, 2021
6XN1
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BU of 6xn1 by Molmil
Crystal structure of the GH43_1 enzyme from Xanthomonas citri complexed with xylose
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Morais, M.A.B, Tonoli, C.C.C, Santos, C.R, Murakami, M.T.
登録日2020-07-02
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Two distinct catalytic pathways for GH43 xylanolytic enzymes unveiled by X-ray and QM/MM simulations.
Nat Commun, 12, 2021
6XN0
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BU of 6xn0 by Molmil
Crystal structure of GH43_1 enzyme from Xanthomonas citri
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Morais, M.A.B, Tonoli, C.C.C, Santos, C.R, Murakami, M.T.
登録日2020-07-02
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.709 Å)
主引用文献Two distinct catalytic pathways for GH43 xylanolytic enzymes unveiled by X-ray and QM/MM simulations.
Nat Commun, 12, 2021
6MOY
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BU of 6moy by Molmil
Crystal structure of the E257A mutant of BlMan5B in complex with GlcNAc (co-crystallization)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BlMan5B
著者Lorizolla-Cordeiro, R, Giuseppe, P.O, Murakami, M.T.
登録日2018-10-05
公開日2019-01-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist beta-Mannosidase.
J. Mol. Biol., 431, 2019
6MP7
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BU of 6mp7 by Molmil
Crystal structure of the E257A mutant of BlMan5B in complex with GlcNAc (soaking)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BlMan5B, CITRATE ANION, ...
著者Lorizolla-Cordeiro, R, Giuseppe, P.O, Murakami, M.T.
登録日2018-10-05
公開日2019-01-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist beta-Mannosidase.
J. Mol. Biol., 431, 2019
6MP2
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BU of 6mp2 by Molmil
Crystal structure of BlMan5B solved by SIRAS
分子名称: BlMan5B, GLYCEROL
著者Lorizolla-Cordeiro, R, Giuseppe, P.O, Murakami, M.T.
登録日2018-10-05
公開日2019-01-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist beta-Mannosidase.
J. Mol. Biol., 431, 2019
6MPA
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BU of 6mpa by Molmil
Crystal structure of BlMan5B in complex with GlcNAc (soaking)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BlMan5B, CITRATE ANION
著者Lorizolla-Cordeiro, R, Giuseppe, P.O, Murakami, M.T.
登録日2018-10-05
公開日2019-01-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist beta-Mannosidase.
J. Mol. Biol., 431, 2019
6MPC
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BU of 6mpc by Molmil
Crystal structure of E257A mutant of BlMan5B
分子名称: BlMan5B
著者Lorizolla-Cordeiro, R, Giuseppe, P.O, Murakami, M.T.
登録日2018-10-05
公開日2019-01-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist beta-Mannosidase.
J. Mol. Biol., 431, 2019
6BYI
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BU of 6byi by Molmil
Crystal structure of the acid-base mutant (E477A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri
分子名称: Beta-mannosidase, beta-D-mannopyranose
著者Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T.
登録日2017-12-20
公開日2018-07-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of exo-beta-mannanase activity in the GH2 family.
J. Biol. Chem., 293, 2018
6D25
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BU of 6d25 by Molmil
Crystal structure of the GH51 arabinofuranosidase from Xanthomonas axonopodis pv. citri
分子名称: Alpha-L-arabinosidase, GLYCEROL
著者Santos, C.R, Morais, M.A.B, Tonoli, C.C.C, Giuseppe, P.O, Murakami, M.T.
登録日2018-04-13
公開日2019-02-20
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献The mechanism by which a distinguishing arabinofuranosidase can cope with internal di-substitutions in arabinoxylans.
Biotechnol Biofuels, 11, 2018
6BYC
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BU of 6byc by Molmil
Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri
分子名称: ACETATE ION, Beta-mannosidase, DI(HYDROXYETHYL)ETHER, ...
著者Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T.
登録日2017-12-20
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.897 Å)
主引用文献Structural basis of exo-beta-mannanase activity in the GH2 family.
J. Biol. Chem., 293, 2018
6BYE
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BU of 6bye by Molmil
Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri in complex with mannose
分子名称: ACETATE ION, Beta-mannosidase, beta-D-mannopyranose
著者Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T.
登録日2017-12-20
公開日2018-07-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.126 Å)
主引用文献Structural basis of exo-beta-mannanase activity in the GH2 family.
J. Biol. Chem., 293, 2018
6BYG
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BU of 6byg by Molmil
Crystal structure of the nucleophile mutant (E575A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri
分子名称: Beta-mannosidase, beta-D-mannopyranose
著者Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T.
登録日2017-12-20
公開日2018-07-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Structural basis of exo-beta-mannanase activity in the GH2 family.
J. Biol. Chem., 293, 2018
7KN8
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BU of 7kn8 by Molmil
Crystal structure of the GH74 xyloglucanase from Xanthomonas campestris (Xcc1752)
分子名称: 1,2-ETHANEDIOL, Cellulase, IODIDE ION, ...
著者Araujo, E.A, Vieira, P.S, Murakami, M.T, Polikarpov, I.
登録日2020-11-04
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
Nature Communications, 12, 2021
7KMN
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BU of 7kmn by Molmil
Crystal structure of XAC1772, a GH35 xyloglucan-active beta-galactosidase from Xanthomonas citri
分子名称: Beta-galactosidase, GH35 family, SULFATE ION
著者Vieira, P.S, Murakami, M.T.
登録日2020-11-03
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
Nature Communications, 12, 2021
7KMP
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BU of 7kmp by Molmil
Crystal structure of the GH31 alpha-xylosidase (Xac1773) from Xanthomonas citri
分子名称: Alpha-xylosidase, GLYCEROL, POTASSIUM ION
著者Vieira, P.S, Murakami, M.T.
登録日2020-11-03
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.556 Å)
主引用文献Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
Nature Communications, 12, 2021
7KMQ
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BU of 7kmq by Molmil
Crystal structure of the GH95 alpha-L-1,2-fucosidase (Xac1774) from Xanthomonas citri
分子名称: CALCIUM ION, GLYCEROL, Glyco_hyd_65N_2 domain-containing protein
著者Vieira, P.S, Murakami, M.T.
登録日2020-11-03
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.045 Å)
主引用文献Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
Nature Communications, 12, 2021
7KMM
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BU of 7kmm by Molmil
Crystal structure of XAC1771, a novel carbohydrate acetylesterase from Xanthomonas citri
分子名称: Sialic acid-specific 9-O-acetylesterase, ZINC ION
著者Vieira, P.S, Murakami, M.T.
登録日2020-11-03
公開日2021-05-26
最終更新日2021-07-07
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
Nature Communications, 12, 2021
7KMO
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BU of 7kmo by Molmil
Crystal structure of the GH35 beta-galactosidase (Xac1772) from Xanthomonas citri in complex with galactose
分子名称: Beta-galactosidase, GH35, GLYCEROL, ...
著者Vieira, P.S, Murakami, M.T.
登録日2020-11-03
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.753 Å)
主引用文献Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
Nature Communications, 12, 2021
7KNC
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BU of 7knc by Molmil
Crystal structure of the GH31 alpha-xylosidase (Xac1773) from Xanthomonas citri
分子名称: Alpha-xylosidase, GLYCEROL, POTASSIUM ION, ...
著者Vieira, P.S, Murakami, M.T.
登録日2020-11-04
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.873 Å)
主引用文献Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
Nature Communications, 12, 2021
6UB3
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Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) with laminaribiose at the surface-binding site
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, SULFATE ION, ...
著者Santos, C.R, Lima, E.A, Mandelli, F, Murakami, M.T.
登録日2019-09-11
公開日2020-05-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family.
Nat.Chem.Biol., 16, 2020

 

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