Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2RP0
DownloadVisualize
BU of 2rp0 by Molmil
Refined solution structure of the PEMV-1 mRNA pseudoknot, 28 lowest energy structures
分子名称: PEMV-1 mRNA pseudoknot
著者Cornish, P.V, Hennig, M, Giedroc, D.P.
登録日2008-04-25
公開日2009-03-31
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Frameshifting RNA pseudoknots: Structure and mechanism.
Virus Res., 139, 2009
2RP1
DownloadVisualize
BU of 2rp1 by Molmil
Refined solution structure of the PEMV-1 mRNA pseudoknot, regularized average structure
分子名称: PEMV-1 mRNA pseudoknot
著者Cornish, P.V, Hennig, M, Giedroc, D.P.
登録日2008-04-25
公開日2009-03-31
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Frameshifting RNA pseudoknots: Structure and mechanism.
Virus Res., 139, 2009
3HD4
DownloadVisualize
BU of 3hd4 by Molmil
MHV Nucleocapsid Protein NTD
分子名称: Nucleoprotein
著者Giedroc, D.P, Keane, S.C, Dann III, C.E.
登録日2009-05-06
公開日2009-11-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.747 Å)
主引用文献Coronavirus N Protein N-Terminal Domain (NTD) Specifically Binds the Transcriptional Regulatory Sequence (TRS) and Melts TRS-cTRS RNA Duplexes.
J.Mol.Biol., 394, 2009
6MNZ
DownloadVisualize
BU of 6mnz by Molmil
Crystal structure of RibBX, a two domain 3,4-dihydroxy-2-butanone 4-phosphate synthase from A. baumannii.
分子名称: 3,4-dihydroxy-2-butanone 4-phosphate synthase, CHLORIDE ION, SULFATE ION
著者Wang, J, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2018-10-03
公開日2019-04-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Multi-metal Restriction by Calprotectin Impacts De Novo Flavin Biosynthesis in Acinetobacter baumannii.
Cell Chem Biol, 26, 2019
8A56
DownloadVisualize
BU of 8a56 by Molmil
Coenzyme A-persulfide reductase (CoAPR) from Enterococcus faecalis
分子名称: 1,2-ETHANEDIOL, 3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE, Coenzyme A-persulfide reductase, ...
著者Costa, S.S, Walsh, B.J, Giedroc, D.P, Brito, J.A.
登録日2022-06-14
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Metabolic and Structural Insights into Hydrogen Sulfide Mis-Regulation in Enterococcus faecalis.
Antioxidants, 11, 2022
7SEK
DownloadVisualize
BU of 7sek by Molmil
Solution structure of the zinc finger domain of murine MetAP1, complexed with ZNG N-terminal peptide
分子名称: COBW domain-containing protein 1,Methionine aminopeptidase 1 fusion, ZINC ION
著者Edmonds, K.A, Jordan, M.R, Thalluri, K, Wu, H, Di Marchi, R, Giedroc, D.P.
登録日2021-09-30
公開日2022-06-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Zn-regulated GTPase metalloprotein activator 1 modulates vertebrate zinc homeostasis.
Cell, 185, 2022
6CDB
DownloadVisualize
BU of 6cdb by Molmil
Crystal Structure of V66L CzrA in the Zn(II)bound state
分子名称: ArsR family transcriptional regulator, CHLORIDE ION, SODIUM ION, ...
著者Capdevila, D.A, Campanello, G, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2018-02-08
公開日2018-07-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Functional Role of Solvent Entropy and Conformational Entropy of Metal Binding in a Dynamically Driven Allosteric System.
J. Am. Chem. Soc., 140, 2018
6CDA
DownloadVisualize
BU of 6cda by Molmil
Crystal structure of L34A CzrA in the Zn(II)bound state
分子名称: ArsR family transcriptional regulator, CHLORIDE ION, GLYCEROL, ...
著者Capdevila, D.A, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2018-02-08
公開日2018-07-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Functional Role of Solvent Entropy and Conformational Entropy of Metal Binding in a Dynamically Driven Allosteric System.
J. Am. Chem. Soc., 140, 2018
7V0F
DownloadVisualize
BU of 7v0f by Molmil
Structure of 6-carboxy-5,6,7,8-tetrahydropterin synthase paralog QueD2 from Acinetobacter baumannii
分子名称: 1,2-ETHANEDIOL, 6-carboxy-5,6,7,8-tetrahydropterin synthase, DI(HYDROXYETHYL)ETHER, ...
著者Jordan, M.R, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2022-05-10
公開日2022-12-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Metal retention and replacement in QueD2 protect queuosine-tRNA biosynthesis in metal-starved Acinetobacter baumannii.
Proc.Natl.Acad.Sci.USA, 119, 2022
4M1P
DownloadVisualize
BU of 4m1p by Molmil
Crystal structure of the copper-sensing repressor CsoR with Cu(I) from Geobacillus thermodenitrificans NG80-2
分子名称: COPPER (I) ION, Copper-sensitive operon repressor (CsoR), SODIUM ION
著者Chang, F, Dann III, C.E, Giedroc, D.P.
登録日2013-08-03
公開日2014-05-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.564 Å)
主引用文献Cu(I)-mediated allosteric switching in a copper-sensing operon repressor (CsoR).
J.Biol.Chem., 289, 2014
6O8O
DownloadVisualize
BU of 6o8o by Molmil
Crystal Structure of C9S disulfide state of Sulfide-responsive transcriptional repressor (SqrR) from Rhodobacter capsulatus.
分子名称: CHLORIDE ION, SULFATE ION, Transcriptional regulator, ...
著者Capdevila, D.A, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2019-03-11
公開日2020-04-01
最終更新日2020-12-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for persulfide-sensing specificity in a transcriptional regulator.
Nat.Chem.Biol., 17, 2021
6O8M
DownloadVisualize
BU of 6o8m by Molmil
Crystal Structure of C9S apo Sulfide-responsive transcriptional repressor (SqrR) from Rhodobacter capsulated bound to diamide (tetramethylazodicarboxamide).
分子名称: N~1~,N~1~,N~2~,N~2~-tetramethylhydrazine-1,2-dicarboxamide, Transcriptional regulator, ArsR family
著者Capdevila, D.A, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2019-03-11
公開日2020-04-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Structural basis for persulfide-sensing specificity in a transcriptional regulator.
Nat.Chem.Biol., 17, 2021
6O8L
DownloadVisualize
BU of 6o8l by Molmil
Crystal Structure of C9S apo and reduced Sulfide-responsive transcriptional repressor (SqrR) from Rhodobacter capsulatus.
分子名称: Transcriptional regulator, ArsR family
著者Capdevila, D.A, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2019-03-11
公開日2020-04-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Structural basis for persulfide-sensing specificity in a transcriptional regulator.
Nat.Chem.Biol., 17, 2021
6O8N
DownloadVisualize
BU of 6o8n by Molmil
Crystal Structure of C9S tetrasulfide state of Sulfide-responsive transcriptional repressor (SqrR) from Rhodobacter capsulatus.
分子名称: SULFATE ION, Transcriptional regulator, ArsR family
著者Capdevila, D.A, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2019-03-11
公開日2020-04-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for persulfide-sensing specificity in a transcriptional regulator.
Nat.Chem.Biol., 17, 2021
6O8K
DownloadVisualize
BU of 6o8k by Molmil
Crystal Structure of apo and reduced Sulfide-responsive transcriptional repressor (SqrR) from Rhodobacter capsulatus.
分子名称: GLYCEROL, SULFATE ION, Transcriptional regulator, ...
著者Capdevila, D.A, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2019-03-11
公開日2020-04-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Structural basis for persulfide-sensing specificity in a transcriptional regulator.
Nat.Chem.Biol., 17, 2021
1CL4
DownloadVisualize
BU of 1cl4 by Molmil
NUCLEOCAPSID PROTEIN FROM MASON-PFIZER MONKEY VIRUS (MPMV)
分子名称: PROTEIN (GAG POLYPROTEIN), ZINC ION
著者Gao, Y, Kaluarachchi, K, Giedroc, D.P.
登録日1999-05-06
公開日1999-05-11
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure and backbone dynamics of Mason-Pfizer monkey virus (MPMV) nucleocapsid protein.
Protein Sci., 7, 1998
7TXL
DownloadVisualize
BU of 7txl by Molmil
Crystal structure of EgtU solute binding domain from Streptococcus pneumoniae D39 in complex with L-ergothioneine
分子名称: 1,2-ETHANEDIOL, Choline transporter (Glycine betaine transport system permease protein), trimethyl-[(2S)-1-oxidanyl-1-oxidanylidene-3-(2-sulfanylidene-1,3-dihydroimidazol-4-yl)propan-2-yl]azanium
著者Zhang, Y, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2022-02-09
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Discovery and structure of a widespread bacterial ABC transporter specific for ergothioneine.
Nat Commun, 13, 2022
7TXK
DownloadVisualize
BU of 7txk by Molmil
Crystal structure of EgtU solute binding domain from Streptococcus pneumoniae D39 in complex with L-ergothioneine
分子名称: 1,2-ETHANEDIOL, Choline transporter (Glycine betaine transport system permease protein), SULFATE ION, ...
著者Zhang, Y, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2022-02-09
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Discovery and structure of a widespread bacterial ABC transporter specific for ergothioneine.
Nat Commun, 13, 2022
7MQ2
DownloadVisualize
BU of 7mq2 by Molmil
C9A Streptococcus pneumoniae CstR in the reduced state, space group P21
分子名称: Copper-sensing transcriptional repressor csoR
著者Fakhoury, J.N, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2021-05-05
公開日2022-03-09
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Functional asymmetry and chemical reactivity of CsoR family persulfide sensors.
Nucleic Acids Res., 49, 2021
7MQ3
DownloadVisualize
BU of 7mq3 by Molmil
C9A N55A Streptococcus pneumoniae CstR in the reduced state
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Copper-sensing transcriptional repressor csoR, SODIUM ION
著者Fakhoury, J, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2021-05-05
公開日2022-03-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Functional asymmetry and chemical reactivity of CsoR family persulfide sensors.
Nucleic Acids Res., 49, 2021
7MQ1
DownloadVisualize
BU of 7mq1 by Molmil
C9A Streptococcus pneumoniae CstR in the reduced state, space group C2
分子名称: CHLORIDE ION, Copper-sensing transcriptional repressor csoR, GLYCEROL, ...
著者Fakhoury, J.N, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2021-05-05
公開日2022-03-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Functional asymmetry and chemical reactivity of CsoR family persulfide sensors.
Nucleic Acids Res., 49, 2021
4F2F
DownloadVisualize
BU of 4f2f by Molmil
Crystal structure of the metal binding domain (MBD) of the Streptococcus pneumoniae D39 Cu(I) exporting P-type ATPase CopA with Cu(I)
分子名称: CHLORIDE ION, COPPER (I) ION, Cation-transporting ATPase, ...
著者Fu, Y, Dann III, C.E, Giedroc, D.P.
登録日2012-05-07
公開日2013-01-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A new structural paradigm in copper resistance in Streptococcus pneumoniae.
Nat.Chem.Biol., 9, 2013
4GGG
DownloadVisualize
BU of 4ggg by Molmil
Crystal structure of V66A/L68V CzrA in the Zn(II)bound state.
分子名称: CHLORIDE ION, Repressor protein, ZINC ION
著者Campanello, G.C, Ma, Z, Grossoehme, N.E, Chakrovorty, D.K, Guerra, A.J, Ye, Y, Dann III, C.E, Merz Jr, K.M, Giedroc, D.P.
登録日2012-08-06
公開日2013-02-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Allosteric inhibition of a zinc-sensing transcriptional repressor: insights into the arsenic repressor (ArsR) family.
J.Mol.Biol., 425, 2013
4F2E
DownloadVisualize
BU of 4f2e by Molmil
Crystal structure of the Streptococcus pneumoniae D39 copper chaperone CupA with Cu(I)
分子名称: CHLORIDE ION, COPPER (I) ION, CupA
著者Fu, Y, Dann III, C.E, Giedroc, D.P.
登録日2012-05-07
公開日2013-01-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.449 Å)
主引用文献A new structural paradigm in copper resistance in Streptococcus pneumoniae.
Nat.Chem.Biol., 9, 2013
1KPZ
DownloadVisualize
BU of 1kpz by Molmil
PEMV-1 P1-P2 Frameshifting Pseudoknot Regularized Average Structure
分子名称: P1-P2 frameshifting pseudoknot
著者Nixon, P.L, Giedroc, D.P.
登録日2002-01-03
公開日2002-01-11
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of a luteoviral P1-P2 frameshifting mRNA pseudoknot
J.Mol.Biol., 322, 2002

 

123>

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon