Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5ONS
DownloadVisualize
BU of 5ons by Molmil
Crystal structure of the minimal DENR-MCTS1 complex
分子名称: Density-regulated protein, GLYCEROL, Malignant T-cell-amplified sequence 1, ...
著者Ahmed, Y.L, Sinning, I.
登録日2017-08-04
公開日2018-05-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献DENR-MCTS1 heterodimerization and tRNA recruitment are required for translation reinitiation.
PLoS Biol., 16, 2018
4N6Q
DownloadVisualize
BU of 4n6q by Molmil
Crystal structure of VosA velvet domain
分子名称: IODIDE ION, NITRATE ION, VosA
著者Ahmed, Y.L, Dickmanns, A, Neumann, P, Ficner, R.
登録日2013-10-14
公開日2014-01-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The Velvet Family of Fungal Regulators Contains a DNA-Binding Domain Structurally Similar to NF-kappa B.
Plos Biol., 11, 2013
6QTA
DownloadVisualize
BU of 6qta by Molmil
Crystal structure of Rea1-MIDAS/Rsa4-UBL complex from Chaetomium thermophilum
分子名称: GLYCEROL, MAGNESIUM ION, Midasin,Midasin, ...
著者Ahmed, Y.L, Thoms, M, Hurt, E, Sinning, I.
登録日2019-02-22
公開日2019-08-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structures of Rea1-MIDAS bound to its ribosome assembly factor ligands resembling integrin-ligand-type complexes.
Nat Commun, 10, 2019
6QTB
DownloadVisualize
BU of 6qtb by Molmil
Crystal structure of Rea1-MIDAS/Ytm1-UBL complex from Chaetomium thermophilum
分子名称: GLYCEROL, MAGNESIUM ION, Midasin,Midasin, ...
著者Ahmed, Y.L, Thoms, M, Hurt, E, Sinning, I.
登録日2019-02-22
公開日2019-08-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structures of Rea1-MIDAS bound to its ribosome assembly factor ligands resembling integrin-ligand-type complexes.
Nat Commun, 10, 2019
6QT8
DownloadVisualize
BU of 6qt8 by Molmil
Crystal structure of Rea1-MIDAS domain from Chaetomium thermophilum
分子名称: GLYCEROL, IODIDE ION, Midasin, ...
著者Ahmed, Y.L, Thoms, M, Hurt, E, Sinning, I.
登録日2019-02-22
公開日2019-08-07
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal structures of Rea1-MIDAS bound to its ribosome assembly factor ligands resembling integrin-ligand-type complexes.
Nat Commun, 10, 2019
4N6R
DownloadVisualize
BU of 4n6r by Molmil
Crystal structure of VosA-VelB-complex
分子名称: SULFATE ION, VelB, VosA
著者Ahmed, Y.L, Dickmanns, A, Neumann, P, Ficner, R.
登録日2013-10-14
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Velvet Family of Fungal Regulators Contains a DNA-Binding Domain Structurally Similar to NF-kappa B.
Plos Biol., 11, 2013
6EMF
DownloadVisualize
BU of 6emf by Molmil
Crystal structure of Rrp1 from Chaetomium thermophilum in space group C2
分子名称: 1,2-ETHANEDIOL, G0S4M2, PROLINE
著者Ahmed, Y.L, Sinning, I.
登録日2017-10-02
公開日2017-12-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6EMG
DownloadVisualize
BU of 6emg by Molmil
Crystal structure of Rrp1 from Chaetomium thermophilum in space group P6322
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, G0S4M2, ...
著者Ahmed, Y.L, Sinning, I.
登録日2017-10-02
公開日2017-12-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
5M43
DownloadVisualize
BU of 5m43 by Molmil
Crystal structure of Yvh1 phosphatase domain from Chaetomium thermophilum
分子名称: GLYCEROL, NITRATE ION, Putative uncharacterized protein
著者Ahmed, Y.L, Sinning, I.
登録日2016-10-18
公開日2016-11-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.646 Å)
主引用文献Interaction network of the ribosome assembly machinery from a eukaryotic thermophile.
Protein Sci., 26, 2017
5M3Q
DownloadVisualize
BU of 5m3q by Molmil
Crystal structure of Tif6 from Chaetomium thermophilum
分子名称: Eukaryotic translation initiation factor 6, GLYCEROL, SULFATE ION
著者Ahmed, Y.L, Calvino, F.R, Sinning, I.
登録日2016-10-17
公開日2016-11-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Interaction network of the ribosome assembly machinery from a eukaryotic thermophile.
Protein Sci., 26, 2017
5EM2
DownloadVisualize
BU of 5em2 by Molmil
Crystal structure of the Erb1-Ytm1 complex
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, Ribosome biogenesis protein ERB1, ...
著者Ahmed, Y.L, Sinning, I.
登録日2015-11-05
公開日2015-12-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Concerted removal of the Erb1-Ytm1 complex in ribosome biogenesis relies on an elaborate interface.
Nucleic Acids Res., 44, 2016
4ZN4
DownloadVisualize
BU of 4zn4 by Molmil
Crystal structure of Sqt1 from Chaetomium thermophilum solved by MR
分子名称: GLYCEROL, SULFATE ION, sqt1
著者Ahmed, Y.L, Sinning, I.
登録日2015-05-04
公開日2015-07-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Co-translational capturing of nascent ribosomal proteins by their dedicated chaperones.
Nat Commun, 6, 2015
6YGU
DownloadVisualize
BU of 6ygu by Molmil
Crystal structure of the minimal Mtr4-Red1 complex (single chain) from Chaetomium thermophilum
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ATP dependent RNA helicase (Dob1)-like protein, ...
著者Dobrev, N, Ahmed, Y.L, Sinning, I.
登録日2020-03-27
公開日2021-05-05
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献The zinc-finger protein Red1 orchestrates MTREC submodules and binds the Mtl1 helicase arch domain.
Nat Commun, 12, 2021
6YFV
DownloadVisualize
BU of 6yfv by Molmil
Crystal structure of Mtr4-Red1 minimal complex from Chaetomium thermophilum
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ATP dependent RNA helicase (Dob1)-like protein, Red1, ...
著者Dobrev, N, Ahmed, Y.L, Sinning, I.
登録日2020-03-26
公開日2021-05-05
最終更新日2021-06-23
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献The zinc-finger protein Red1 orchestrates MTREC submodules and binds the Mtl1 helicase arch domain.
Nat Commun, 12, 2021
5N1A
DownloadVisualize
BU of 5n1a by Molmil
Crystal structure of Utp4 from Chaetomium thermophilum
分子名称: utp4
著者Calvino, F.R, Ahmed, Y.L, Wild, K, Sinning, I.
登録日2017-02-05
公開日2017-06-14
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for 5'-ETS recognition by Utp4 at the early stages of ribosome biogenesis.
PLoS ONE, 12, 2017
5O9E
DownloadVisualize
BU of 5o9e by Molmil
Crystal structure of the Imp4-Mpp10 complex from Chaetomium thermophilum
分子名称: 1,2-ETHANEDIOL, Putative U3 small nucleolar ribonucleoprotein, Putative U3 small nucleolar ribonucleoprotein protein
著者Kharde, S, Ahmed, Y.L, Sinning, I.
登録日2017-06-19
公開日2017-08-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.884 Å)
主引用文献Mpp10 represents a platform for the interaction of multiple factors within the 90S pre-ribosome.
PLoS ONE, 12, 2017
5E4X
DownloadVisualize
BU of 5e4x by Molmil
Crystal structure of cpSRP43 chromodomain 3
分子名称: MAGNESIUM ION, Signal recognition particle 43 kDa protein, chloroplastic
著者Horn, A, Ahmed, Y.L, Wild, K, Sinning, I.
登録日2015-10-07
公開日2015-12-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural basis for cpSRP43 chromodomain selectivity and dynamics in Alb3 insertase interaction.
Nat Commun, 6, 2015
5E4W
DownloadVisualize
BU of 5e4w by Molmil
Crystal structure of cpSRP43 chromodomains 2 and 3 in complex with the Alb3 tail
分子名称: CALCIUM ION, GLYCEROL, Inner membrane protein ALBINO3, ...
著者Horn, A, Ahmed, Y.L, Wild, K, Sinning, I.
登録日2015-10-07
公開日2015-12-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for cpSRP43 chromodomain selectivity and dynamics in Alb3 insertase interaction.
Nat Commun, 6, 2015
6EM1
DownloadVisualize
BU of 6em1 by Molmil
State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
分子名称: 25S ribosomal RNA, 5.8S ribosomal RNA, 60S ribosomal protein L13-A, ...
著者Kater, L, Cheng, J, Barrio-Garcia, C, Hurt, E, Beckmann, R.
登録日2017-10-01
公開日2017-12-27
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6EN7
DownloadVisualize
BU of 6en7 by Molmil
Crystal structure of the ribosome assembly factor Nsa1
分子名称: Ribosome biogenesis protein NSA1
著者Altegoer, F, Bange, G.
登録日2017-10-04
公開日2017-12-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.403 Å)
主引用文献Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6ELZ
DownloadVisualize
BU of 6elz by Molmil
State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
分子名称: 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 25S ribosomal RNA, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, ...
著者Kater, L, Cheng, J, Barrio-Garcia, C, Hurt, E, Beckmann, R.
登録日2017-09-30
公開日2017-12-27
最終更新日2023-02-15
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6EM3
DownloadVisualize
BU of 6em3 by Molmil
State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
分子名称: 25S ribosomal RNA, 5.8S ribosomal RNA, 60S ribosomal protein L13-A, ...
著者Kater, L, Cheng, J, Barrio-Garcia, C, Hurt, E, Beckmann, R.
登録日2017-10-01
公開日2017-12-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6EM4
DownloadVisualize
BU of 6em4 by Molmil
State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
分子名称: 25S ribosomal RNA, 5.8S ribosomal RNA, 60S ribosomal protein L13-A, ...
著者Kater, L, Cheng, J, Barrio-Garcia, C, Hurt, E, Beckmann, R.
登録日2017-10-01
公開日2017-12-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6EM5
DownloadVisualize
BU of 6em5 by Molmil
State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
分子名称: 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 25S ribosomal RNA, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, ...
著者Kater, L, Cheng, J, Barrio-Garcia, C, Hurt, E, Beckmann, R.
登録日2017-10-01
公開日2017-12-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
2N88
DownloadVisualize
BU of 2n88 by Molmil
Chromodomain 3 (CD3) of cpSRP43
分子名称: Signal recognition particle 43 kDa protein, chloroplastic
著者Hennig, J, Sattler, M.
登録日2015-10-06
公開日2015-12-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis for cpSRP43 chromodomain selectivity and dynamics in Alb3 insertase interaction.
Nat Commun, 6, 2015

 

12>

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon