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THE HEXAGONAL CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GTGTACAC) AND ITS COMPARISON WITH THE TETRAGONAL STRUCTURE CORRELATED VARIATIONS IN HELICAL PARAMETERS
分子名称:	DNA (5'-D(GPTPGPTPAPCPAPC)-3')
著者	Jain, S.C, Zon, G, Sundaralingam, M.
登録日	1991-05-28
公開日	2011-07-13
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	The Hexagonal Crystal Structure of the A-DNA Octamer d(GTGTACAC) and Its Comparison with the Tetragonal Structure Correlated Variations in Helical Parameters Biochemistry, 30, 1991

2FPT

Dual Binding Mode of a Novel Series of DHODH inhibitors
分子名称:	2-({[3,5-DIFLUORO-3'-(TRIFLUOROMETHOXY)BIPHENYL-4-YL]AMINO}CARBONYL)CYCLOPENT-1-ENE-1-CARBOXYLIC ACID, ACETATE ION, Dihydroorotate dehydrogenase, ...
著者	Baumgartner, R, Walloschek, M, Kralik, M, Gotschlich, A, Tasler, S, Leban, J.
登録日	2006-01-17
公開日	2007-01-23
最終更新日	2023-08-30
実験手法	X-RAY DIFFRACTION (2.4 Å)
主引用文献	Dual binding mode of a novel series of DHODH inhibitors. J.Med.Chem., 49, 2006

116D

CRYSTAL AND MOLECULAR STRUCTURE OF THE A-DNA DODECAMER D(CCGTACGTACGG): CHOICE OF FRAGMENT HELICAL AXIS
分子名称:	DNA (5'-D(CPCPGPTPAPCPGPTPAPCPGPG)-3')
著者	Bingman, C.A, Zon, G, Sundaralingam, M.
登録日	1993-02-10
公開日	1993-04-15
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (2.5 Å)
主引用文献	Crystal and molecular structure of the A-DNA dodecamer d(CCGTACGTACGG). Choice of fragment helical axis. J.Mol.Biol., 227, 1992

117D

CRYSTAL AND MOLECULAR STRUCTURE OF THE ALTERNATING DODECAMER D(GCGTACGTACGC) IN THE A-DNA FORM: COMPARISON WITH THE ISOMORPHOUS NON-ALTERNATING DODECAMER D(CCGTACGTACGG)
分子名称:	DNA (5'-D(GPCPGPTPAPCPGPTPAPCPGPC)-3')
著者	Bingman, C.A, Jain, S, Zon, G, Sundaralingam, M.
登録日	1993-02-10
公開日	1993-04-15
最終更新日	2023-03-22
実験手法	X-RAY DIFFRACTION (2.55 Å)
主引用文献	Crystal and molecular structure of the alternating dodecamer d(GCGTACGTACGC) in the A-DNA form: comparison with the isomorphous non-alternating dodecamer d(CCGTACGTACGG). Nucleic Acids Res., 20, 1992

2IWH

Structure of yeast Elongation Factor 3 in complex with ADPNP
分子名称:	ELONGATION FACTOR 3A, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SULFATE ION
著者	Andersen, C.B.F, Becker, T, Blau, M, Anand, M, Halic, M, Balar, B, Mielke, T, Boesen, T, Pedersen, J.S, Spahn, C.M.T, Kinzy, T.G, Andersen, G.R, Beckmann, R.
登録日	2006-06-30
公開日	2006-08-09
最終更新日	2024-05-08
実験手法	X-RAY DIFFRACTION (3 Å)
主引用文献	Structure of Eef3 and the Mechanism of Transfer RNA Release from the E-Site. Nature, 443, 2006

9G2A

Staphylococcus aureus MazF in complex with nanobody 4
分子名称:	3[N-MORPHOLINO]PROPANE SULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Endoribonuclease MazF, ...
著者	Prolic-Kalinsek, M, Zorzini, V, Haesaerts, S, Loris, R.
登録日	2024-07-10
公開日	2024-07-17
実験手法	X-RAY DIFFRACTION (2.046594 Å)
主引用文献	Staphylococcus aureus MazF in complex with nanobody 4 To Be Published

2IX3

Structure of yeast Elongation Factor 3
分子名称:	ELONGATION FACTOR 3, SULFATE ION
著者	Andersen, C.B.F, Becker, T, Blau, M, Anand, M, Halic, M, Balar, B, Mielke, T, Boesen, T, Pedersen, J.S, Spahn, C.M.T, Kinzy, T.G, Andersen, G.R, Beckmann, R.
登録日	2006-07-06
公開日	2006-08-08
最終更新日	2024-05-08
実験手法	X-RAY DIFFRACTION (2.7 Å)
主引用文献	Structure of Eef3 and the Mechanism of Transfer RNA Release from the E-Site. Nature, 443, 2006

2IW3

Elongation Factor 3 in complex with ADP
分子名称:	ADENOSINE-5'-DIPHOSPHATE, ELONGATION FACTOR 3A, SULFATE ION
著者	Andersen, C.B.F, Becker, T, Blau, M, Anand, M, Halic, M, Balar, B, Mielke, T, Boesen, T, Pedersen, J.S, Spahn, C.M.T, Kinzy, T.G, Andersen, G.R, Beckmann, R.
登録日	2006-06-26
公開日	2006-08-17
最終更新日	2011-07-13
実験手法	X-RAY DIFFRACTION (2.4 Å)
主引用文献	Structure of Eef3 and the Mechanism of Transfer RNA Release from the E-Site. Nature, 443, 2006

1D78

HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION
分子名称:	DNA (5'-D(GPTPGPTPAPCPAPC)-3')
著者	Thota, N, Li, X.H, Bingman, C.A, Sundaralingam, M.
登録日	1992-06-12
公開日	1993-04-15
最終更新日	2023-03-22
実験手法	X-RAY DIFFRACTION (1.4 Å)
主引用文献	High-resolution refinement of the hexagonal A-DNA octamer d(GTGTACAC) at 1.4 A. Acta Crystallogr.,Sect.D, 49, 1993

2IX8

MODEL FOR EEF3 BOUND TO AN 80S RIBOSOME
分子名称:	ELONGATION FACTOR 3A
著者	Andersen, C.B.F, Becker, T, Blau, M, Anand, M, Halic, M, Balar, B, Mielke, T, Boesen, T, Pedersen, J.S, Spahn, C.M.T, Kinzy, T.G, Andersen, G.R, Beckmann, R.
登録日	2006-07-07
公開日	2007-07-10
最終更新日	2017-08-23
実験手法	ELECTRON MICROSCOPY (6 Å)
主引用文献	Structure of Eef3 and the Mechanism of Transfer RNA Release from the E-Site. Nature, 443, 2006

1CEH

STRUCTURE AND FUNCTION OF THE CATALYTIC SITE MUTANT ASP99ASN OF PHOSPHOLIPASE A2: ABSENCE OF CONSERVED STRUCTURAL WATER
分子名称:	CALCIUM ION, PHOSPHOLIPASE A2
著者	Kumar, A, Sekharudu, C, Ramakrishnan, B, Dupureur, C.M, Zhu, H, Tsai, M.-D, Sundaralingam, M.
登録日	1994-11-16
公開日	1995-02-07
最終更新日	2024-06-05
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Structure and function of the catalytic site mutant Asp 99 Asn of phospholipase A2: absence of the conserved structural water. Protein Sci., 3, 1994

1DNS

BASE ONLY BINDING OF SPERMINE IN THE DEEP GROOVE OF THE A-DNA OCTAMER D(GTGTACAC)
分子名称:	DNA (5'-D(GPTPGPTPAPCPAPC)-3'), SPERMINE
著者	Jain, S.C, Zon, G, Sundaralingam, M.
登録日	1989-02-22
公開日	1990-04-15
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Base only binding of spermine in the deep groove of the A-DNA octamer d(GTGTACAC). Biochemistry, 28, 1989

1DN8

STRUCTURE OF A Z-DNA WITH TWO DIFFERENT BACKBONE CHAIN CONFORMATIONS. STABILIZATION OF THE DECADEOXYOLIGONUCLEOTIDE D(CGTACGTACG) BY (CO(NH3)6)3+ BINDING TO THE GUANINE
分子名称:	COBALT HEXAMMINE(III), DNA (5'-D(PCPGPTPAPCPGPTPAPCP*G)-3')
著者	Brennan, R.G, Westhof, E, Sundaralingam, M.
登録日	1987-05-12
公開日	1988-04-16
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (1.5 Å)
主引用文献	Structure of a Z-DNA with two different backbone chain conformations. Stabilization of the decadeoxyoligonucleotide d(CGTACGTACG) by [Co(NH3)6]3+ binding to the guanine. J.Biomol.Struct.Dyn., 3, 1986

1D79

HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION
分子名称:	DNA (5'-D(GPTPGPTPAPCPAPC)-3')
著者	Thota, N, Li, X.H, Bingman, C.A, Sundaralingam, M.
登録日	1992-06-12
公開日	1993-04-15
最終更新日	2023-03-22
実験手法	X-RAY DIFFRACTION (1.45 Å)
主引用文献	High-resolution refinement of the hexagonal A-DNA octamer d(GTGTACAC) at 1.4 A. Acta Crystallogr.,Sect.D, 49, 1993

1J8G

X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution
分子名称:	5'-R(UPGPGPGPGPU)-3', CALCIUM ION, SODIUM ION, ...
著者	Deng, J, Xiong, Y, Sundaralingam, M.
登録日	2001-05-21
公開日	2001-11-23
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (0.61 Å)
主引用文献	X-ray analysis of an RNA tetraplex (UGGGGU)(4) with divalent Sr(2+) ions at subatomic resolution (0.61 A). Proc.Natl.Acad.Sci.USA, 98, 2001

1J9H

Crystal Structure of an RNA Duplex with Uridine Bulges
分子名称:	5'-R(GPUPGPUPCPGP(CBR)PAP*C)-3', CALCIUM ION
著者	Xiong, Y, Deng, J, Sudarsanakumar, C, Sundaralingam, M.
登録日	2001-05-25
公開日	2001-10-26
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (1.4 Å)
主引用文献	Crystal structure of an RNA duplex r(gugucgcac)(2) with uridine bulges. J.Mol.Biol., 313, 2001

1JO2

Crystal Structure of the B-DNA Hexamer (CgATCG).Daunomycin Complex Containing a Ribose at the Intercalation Site
分子名称:	5'-D(C)-R(PG)-D(PAPTPCPG)-3', DAUNOMYCIN
著者	Shi, K, Pan, B, Sundaralingam, M.
登録日	2001-07-26
公開日	2003-07-29
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (1.5 Å)
主引用文献	Structure of a B-form DNA/RNA chimera (dC)(rG)d(ATCG) complexed with daunomycin at 1.5 A resolution. Acta Crystallogr.,Sect.D, 59, 2003

8EUI

Ytm1 associated nascent 60S ribosome (-fkbp39) State 3
分子名称:	60S ribosomal protein L10-A, 60S ribosomal protein L11-A, 60S ribosomal protein L13, ...
著者	Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M.
登録日	2022-10-18
公開日	2022-11-30
最終更新日	2024-06-19
実験手法	ELECTRON MICROSCOPY (3.1 Å)
主引用文献	Chromatin localization of nucleophosmin organizes ribosome biogenesis. Mol.Cell, 82, 2022

8ETI

Fkbp39 associated 60S nascent ribosome State 1
分子名称:	60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15-A, ...
著者	Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M.
登録日	2022-10-17
公開日	2022-11-30
最終更新日	2024-06-19
実験手法	ELECTRON MICROSCOPY (3.7 Å)
主引用文献	Chromatin localization of nucleophosmin organizes ribosome biogenesis. Mol.Cell, 82, 2022

8ETH

Ytm1 associated 60S nascent ribosome State 1B
分子名称:	60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15-A, ...
著者	Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M.
登録日	2022-10-17
公開日	2022-11-30
最終更新日	2024-06-19
実験手法	ELECTRON MICROSCOPY (3.8 Å)
主引用文献	Chromatin localization of nucleophosmin organizes ribosome biogenesis. Mol.Cell, 82, 2022

8ETG

Fkbp39 associated 60S nascent ribosome State 3
分子名称:	60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15-A, ...
著者	Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M.
登録日	2022-10-17
公開日	2022-11-30
最終更新日	2024-06-19
実験手法	ELECTRON MICROSCOPY (3.4 Å)
主引用文献	Chromatin localization of nucleophosmin organizes ribosome biogenesis. Mol.Cell, 82, 2022

8ESR

Ytm1 associated nascent 60S ribosome (-fkbp39) State 2
分子名称:	25S rRNA (cytosine-C(5))-methyltransferase nop2, 60S ribosomal protein L13, 60S ribosomal protein L14, ...
著者	Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M.
登録日	2022-10-14
公開日	2022-11-30
最終更新日	2022-12-14
実験手法	ELECTRON MICROSCOPY (3.2 Å)
主引用文献	Chromatin localization of nucleophosmin organizes ribosome biogenesis. Mol.Cell, 82, 2022

8EUP

Ytm1 associated 60S nascent ribosome State 1A
分子名称:	60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15-A, ...
著者	Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M.
登録日	2022-10-19
公開日	2022-11-30
最終更新日	2024-06-19
実験手法	ELECTRON MICROSCOPY (3.1 Å)
主引用文献	Chromatin localization of nucleophosmin organizes ribosome biogenesis. Mol.Cell, 82, 2022

8EV3

Ytm1 associated 60S nascent ribosome (-Fkbp39) State 1B
分子名称:	60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15-A, ...
著者	Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M.
登録日	2022-10-19
公開日	2022-11-30
最終更新日	2024-06-19
実験手法	ELECTRON MICROSCOPY (3 Å)
主引用文献	Chromatin localization of nucleophosmin organizes ribosome biogenesis. Mol.Cell, 82, 2022

1RCF

STRUCTURE OF THE TRIGONAL FORM OF RECOMBINANT OXIDIZED FLAVODOXIN FROM ANABAENA 7120 AT 1.40 ANGSTROMS RESOLUTION
分子名称:	FLAVIN MONONUCLEOTIDE, FLAVODOXIN, SULFATE ION
著者	Burkhart, B, Ramakrishnan, B, Yan, H, Reedstrom, R, Markley, J, Straus, N, Sundaralingam, M.
登録日	1994-10-31
公開日	1995-01-26
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (1.4 Å)
主引用文献	Structure of the trigonal form of recombinant oxidized flavodoxin from Anabaena 7120 at 1.40 A resolution. Acta Crystallogr.,Sect.D, 51, 1995

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